RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 ZNF862O60290 1169 aa8.42□□□□□ -1.06
ZEB1-216ENST00000559496 PDE8AO60658 829 aa8.42□□□□□ -1.06
ZEB1-216ENST00000559496 NTSR2O95665 410 aa8.42□□□□□ -1.06
ZEB1-216ENST00000559496 WNT11O96014 354 aa8.42□□□□□ -1.06
ZEB1-216ENST00000559496 CTSWP56202 376 aa8.42□□□□□ -1.06
ZEB1-216ENST00000559496 KIF4BQ2VIQ3 1234 aa8.42□□□□□ -1.06
ZEB1-216ENST00000559496 C16orf71Q8IYS4 520 aaPredicted RBP8.42□□□□□ -1.06
ZEB1-216ENST00000559496 KLHDC4Q8TBB5 520 aa8.42□□□□□ -1.06
ZEB1-216ENST00000559496 TRIM44Q96DX7 344 aaPredicted RBP8.42□□□□□ -1.06
ZEB1-216ENST00000559496 SIL1Q9H173 461 aa8.42□□□□□ -1.06
ZEB1-216ENST00000559496 IL1RAPL2Q9NP60 686 aa8.42□□□□□ -1.06
ZEB1-216ENST00000559496 COPRSQ9NQ92 184 aa8.42□□□□□ -1.06
ZEB1-216ENST00000559496 CRIM1Q9NZV1 1036 aa8.42□□□□□ -1.06
ZEB1-216ENST00000559496 GIPC1O14908 333 aa8.41□□□□□ -1.06
ZEB1-216ENST00000559496 FRAT2O75474 233 aaPredicted RBP8.41□□□□□ -1.06
ZEB1-216ENST00000559496 CSF1RP07333 972 aa8.41□□□□□ -1.06
ZEB1-216ENST00000559496 HCLS1P14317 486 aaPredicted RBP8.41□□□□□ -1.06
ZEB1-216ENST00000559496 ARNTP27540 789 aa8.41□□□□□ -1.06
ZEB1-216ENST00000559496 CYP27A1Q02318 531 aa8.41□□□□□ -1.06
ZEB1-216ENST00000559496 ID3Q02535 119 aa8.41□□□□□ -1.06
ZEB1-216ENST00000559496 IFIT5Q13325 482 aaKnown RBP8.41□□□□□ -1.06
ZEB1-216ENST00000559496 ZNF827Q17R98 1081 aa8.41□□□□□ -1.06
ZEB1-216ENST00000559496 CCDC57Q2TAC2 916 aa8.41□□□□□ -1.06
ZEB1-216ENST00000559496 ALG1LQ6GMV1 187 aa8.41□□□□□ -1.06
ZEB1-216ENST00000559496 SEZ6L2Q6UXD5 910 aa8.41□□□□□ -1.06
ZEB1-216ENST00000559496 PDZD3Q86UT5 571 aa8.41□□□□□ -1.06
ZEB1-216ENST00000559496 OTUD7AQ8TE49 926 aaPredicted RBP8.41□□□□□ -1.06
ZEB1-216ENST00000559496 SECISBP2LQ93073 1101 aaKnown RBP8.41□□□□□ -1.06
ZEB1-216ENST00000559496 SETDB2Q96T68 719 aa8.41□□□□□ -1.06
ZEB1-216ENST00000559496 NYXQ9GZU5 481 aa8.41□□□□□ -1.06
ZEB1-216ENST00000559496 TFCP2L1Q9NZI6 479 aa8.41□□□□□ -1.06
ZEB1-216ENST00000559496 COL24A1Q17RW2 1714 aa8.41□□□□□ -1.06
ZEB1-216ENST00000559496 LAMB2P55268 1798 aa8.41□□□□□ -1.06
ZEB1-216ENST00000559496 FAM170BA6NMN3 283 aa8.4□□□□□ -1.06
ZEB1-216ENST00000559496 GSTT1P30711 240 aa8.4□□□□□ -1.06
ZEB1-216ENST00000559496 SLC20A2Q08357 652 aa8.4□□□□□ -1.06
ZEB1-216ENST00000559496 MSMPQ1L6U9 139 aa8.4□□□□□ -1.06
ZEB1-216ENST00000559496 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.4□□□□□ -1.06
ZEB1-216ENST00000559496 NBPF5PQ86XG9 351 aaPredicted RBP8.4□□□□□ -1.06
ZEB1-216ENST00000559496 SULF2Q8IWU5 870 aa8.4□□□□□ -1.06
ZEB1-216ENST00000559496 CLASRPQ8N2M8 674 aaKnown RBP8.4□□□□□ -1.06
ZEB1-216ENST00000559496 C3orf58Q8NDZ4 430 aa8.4□□□□□ -1.06
ZEB1-216ENST00000559496 TTLL11Q8NHH1 800 aa8.4□□□□□ -1.06
ZEB1-216ENST00000559496 ZNF830Q96NB3 372 aaPredicted RBP8.4□□□□□ -1.06
ZEB1-216ENST00000559496 CAMKK2Q96RR4 588 aa8.4□□□□□ -1.06
ZEB1-216ENST00000559496 KRTAP4-12Q9BQ66 201 aa8.4□□□□□ -1.06
ZEB1-216ENST00000559496 EMILIN2Q9BXX0 1053 aa8.4□□□□□ -1.06
ZEB1-216ENST00000559496 ATXN3LQ9H3M9 355 aa8.4□□□□□ -1.06
ZEB1-216ENST00000559496 C1GALT1Q9NS00 363 aa8.4□□□□□ -1.06
ZEB1-216ENST00000559496 DDX60Q8IY21 1712 aaKnown RBP8.4□□□□□ -1.07
ZEB1-216ENST00000559496 CARMIL3Q8ND23 1372 aa8.39□□□□□ -1.07
ZEB1-216ENST00000559496 ANKRD18BA2A2Z9 1011 aa8.39□□□□□ -1.07
ZEB1-216ENST00000559496 NPHP1O15259 732 aa8.39□□□□□ -1.07
ZEB1-216ENST00000559496 CYP26A1O43174 497 aa8.39□□□□□ -1.07
ZEB1-216ENST00000559496 SASH1O94885 1247 aa8.39□□□□□ -1.07
ZEB1-216ENST00000559496 GYS1P13807 737 aa8.39□□□□□ -1.07
ZEB1-216ENST00000559496 MX1P20591 662 aa8.39□□□□□ -1.07
ZEB1-216ENST00000559496 NME2P22392 152 aa8.39□□□□□ -1.07
ZEB1-216ENST00000559496 MRE11P49959 708 aa8.39□□□□□ -1.07
ZEB1-216ENST00000559496 NFIXQ14938 502 aa8.39□□□□□ -1.07
ZEB1-216ENST00000559496 EZH2Q15910 746 aaKnown RBP8.39□□□□□ -1.07
ZEB1-216ENST00000559496 BMP2KLQ5H9B9 411 aa8.39□□□□□ -1.07
ZEB1-216ENST00000559496 FLAD1Q8NFF5 587 aa8.39□□□□□ -1.07
ZEB1-216ENST00000559496 KCNB2Q92953 911 aa8.39□□□□□ -1.07
ZEB1-216ENST00000559496 FANCD2OSQ96PS1 177 aa8.39□□□□□ -1.07
ZEB1-216ENST00000559496 GREM2Q9H772 168 aa8.39□□□□□ -1.07
ZEB1-216ENST00000559496 DAGLAQ9Y4D2 1042 aa8.39□□□□□ -1.07
ZEB1-216ENST00000559496 PCDHGC5Q9Y5F6 944 aa8.39□□□□□ -1.07
ZEB1-216ENST00000559496 TUBGCP6Q96RT7 1819 aa8.39□□□□□ -1.07
ZEB1-216ENST00000559496 SALL3Q9BXA9 1300 aa8.39□□□□□ -1.07
ZEB1-216ENST00000559496 ABCC12Q96J65 1359 aa8.38□□□□□ -1.07
ZEB1-216ENST00000559496 EYA2O00167 538 aa8.38□□□□□ -1.07
ZEB1-216ENST00000559496 OFD1O75665 1012 aa8.38□□□□□ -1.07
ZEB1-216ENST00000559496 CIAO1O76071 339 aa8.38□□□□□ -1.07
ZEB1-216ENST00000559496 IFIT2P09913 472 aaKnown RBP8.38□□□□□ -1.07
ZEB1-216ENST00000559496 XRCC6P12956 609 aaKnown RBP eCLIP8.38□□□□□ -1.071e-8■■■■■ 35.6
ZEB1-216ENST00000559496 IL15P40933 162 aaPredicted RBP8.38□□□□□ -1.07
ZEB1-216ENST00000559496 MMP14P50281 582 aa8.38□□□□□ -1.07
ZEB1-216ENST00000559496 PDE1AP54750 535 aa8.38□□□□□ -1.07
ZEB1-216ENST00000559496 ATP2B2Q01814 1243 aa8.38□□□□□ -1.07
ZEB1-216ENST00000559496 CCDC152Q4G0S7 254 aa8.38□□□□□ -1.07
ZEB1-216ENST00000559496 TTC22Q5TAA0 569 aa8.38□□□□□ -1.07
ZEB1-216ENST00000559496 OGFOD3Q6PK18 319 aa8.38□□□□□ -1.07
ZEB1-216ENST00000559496 TPTE2Q6XPS3 522 aa8.38□□□□□ -1.07
ZEB1-216ENST00000559496 AACSQ86V21 672 aa8.38□□□□□ -1.07
ZEB1-216ENST00000559496 STK35Q8TDR2 534 aa8.38□□□□□ -1.07
ZEB1-216ENST00000559496 OSBPL7Q9BZF2 842 aa8.38□□□□□ -1.07
ZEB1-216ENST00000559496 PIDD1Q9HB75 910 aa8.38□□□□□ -1.07
ZEB1-216ENST00000559496 DISC1Q9NRI5 854 aa8.38□□□□□ -1.07
ZEB1-216ENST00000559496 STK32BQ9NY57 414 aa8.38□□□□□ -1.07
ZEB1-216ENST00000559496 AOX1Q06278 1338 aa8.38□□□□□ -1.07
ZEB1-216ENST00000559496 RTL9Q8NET4 1388 aa8.37□□□□□ -1.07
ZEB1-216ENST00000559496 CLGNO14967 610 aa8.37□□□□□ -1.07
ZEB1-216ENST00000559496 GSPT1P15170 499 aaKnown RBP8.37□□□□□ -1.07
ZEB1-216ENST00000559496 IRAK1P51617 712 aa8.37□□□□□ -1.07
ZEB1-216ENST00000559496 IRX3P78415 501 aaPredicted RBP8.37□□□□□ -1.07
ZEB1-216ENST00000559496 TFCP2Q12800 502 aa8.37□□□□□ -1.07
ZEB1-216ENST00000559496 LRRC24Q50LG9 513 aa8.37□□□□□ -1.07
ZEB1-216ENST00000559496 SLC10A5Q5PT55 438 aa8.37□□□□□ -1.07
ZEB1-216ENST00000559496 TSHZ3Q63HK5 1081 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms