RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 LIFRP42702 1097 aa14.59□□□□□ -0.07
LRRC28-214ENST00000559433 HSD17B4P51659 736 aa14.59□□□□□ -0.07
LRRC28-214ENST00000559433 NKX3-2P78367 333 aa14.59□□□□□ -0.07
LRRC28-214ENST00000559433 DUSP28Q4G0W2 176 aa14.59□□□□□ -0.07
LRRC28-214ENST00000559433 TMEM63BQ5T3F8 832 aa14.59□□□□□ -0.07
LRRC28-214ENST00000559433 RASEFQ8IZ41 740 aa14.59□□□□□ -0.07
LRRC28-214ENST00000559433 TDHQ8IZJ6 230 aa14.59□□□□□ -0.07
LRRC28-214ENST00000559433 NEK1Q96PY6 1258 aa14.59□□□□□ -0.07
LRRC28-214ENST00000559433 RMDN3Q96TC7 470 aa14.59□□□□□ -0.07
LRRC28-214ENST00000559433 PDLIM7Q9NR12 457 aa14.59□□□□□ -0.07
LRRC28-214ENST00000559433 TMEM39AQ9NV64 488 aa14.59□□□□□ -0.07
LRRC28-214ENST00000559433 Q9Y3F1 56 aa14.59□□□□□ -0.07
LRRC28-214ENST00000559433 SLC12A7Q9Y666 1083 aa14.59□□□□□ -0.07
LRRC28-214ENST00000559433 A0A0U1RQG5 324 aaPredicted RBP14.58□□□□□ -0.08
LRRC28-214ENST00000559433 RBM47A0AV96 593 aaKnown RBP14.58□□□□□ -0.08
LRRC28-214ENST00000559433 CLTBP09497 229 aa14.58□□□□□ -0.08
LRRC28-214ENST00000559433 EIF2AK2P19525 551 aaKnown RBP14.58□□□□□ -0.08
LRRC28-214ENST00000559433 GNAQP50148 359 aa14.58□□□□□ -0.08
LRRC28-214ENST00000559433 KRT32Q14532 448 aa14.58□□□□□ -0.08
LRRC28-214ENST00000559433 PPP2R5BQ15173 497 aa14.58□□□□□ -0.08
LRRC28-214ENST00000559433 ADCK5Q3MIX3 580 aa14.58□□□□□ -0.08
LRRC28-214ENST00000559433 TSGA10IPQ3SY00 556 aa14.58□□□□□ -0.08
LRRC28-214ENST00000559433 BRDTQ58F21 947 aaPredicted RBP14.58□□□□□ -0.08
LRRC28-214ENST00000559433 ARHGEF16Q5VV41 709 aa14.58□□□□□ -0.08
LRRC28-214ENST00000559433 ERICH6BQ5W0A0 696 aa14.58□□□□□ -0.08
LRRC28-214ENST00000559433 RAB11FIP4Q86YS3 637 aa14.58□□□□□ -0.08
LRRC28-214ENST00000559433 SCFD2Q8WU76 684 aa14.58□□□□□ -0.08
LRRC28-214ENST00000559433 RRP36Q96EU6 259 aaKnown RBP14.58□□□□□ -0.08
LRRC28-214ENST00000559433 TCEANC2Q96MN5 208 aa14.58□□□□□ -0.08
LRRC28-214ENST00000559433 IWS1Q96ST2 819 aa14.58□□□□□ -0.08
LRRC28-214ENST00000559433 LZTS2Q9BRK4 669 aa14.58□□□□□ -0.08
LRRC28-214ENST00000559433 SPZ1Q9BXG8 430 aa14.58□□□□□ -0.08
LRRC28-214ENST00000559433 ELP1O95163 1332 aa14.58□□□□□ -0.08
LRRC28-214ENST00000559433 TLR3O15455 904 aaKnown RBP14.57□□□□□ -0.08
LRRC28-214ENST00000559433 CABYRO75952 493 aa14.57□□□□□ -0.08
LRRC28-214ENST00000559433 PLEKHA8P1O95397 391 aa14.57□□□□□ -0.08
LRRC28-214ENST00000559433 RAG1P15918 1043 aa14.57□□□□□ -0.08
LRRC28-214ENST00000559433 GHRHRQ02643 423 aa14.57□□□□□ -0.08
LRRC28-214ENST00000559433 STXBP2Q15833 593 aa14.57□□□□□ -0.08
LRRC28-214ENST00000559433 CXCL17Q6UXB2 119 aa14.57□□□□□ -0.08
LRRC28-214ENST00000559433 DHX32Q7L7V1 743 aaKnown RBP14.57□□□□□ -0.08
LRRC28-214ENST00000559433 SH3RF1Q7Z6J0 888 aa14.57□□□□□ -0.08
LRRC28-214ENST00000559433 SGMS1Q86VZ5 419 aa14.57□□□□□ -0.08
LRRC28-214ENST00000559433 MICU3Q86XE3 530 aa14.57□□□□□ -0.08
LRRC28-214ENST00000559433 OR6J1Q8NGC5 347 aa14.57□□□□□ -0.08
LRRC28-214ENST00000559433 TOX2Q96NM4 488 aa14.57□□□□□ -0.08
LRRC28-214ENST00000559433 PXMP2Q9NR77 195 aa14.57□□□□□ -0.08
LRRC28-214ENST00000559433 MAP3K20Q9NYL2 800 aaKnown RBP14.57□□□□□ -0.08
LRRC28-214ENST00000559433 SEC63Q9UGP8 760 aaKnown RBP14.57□□□□□ -0.08
LRRC28-214ENST00000559433 MROH7Q68CQ1 1323 aa14.57□□□□□ -0.08
LRRC28-214ENST00000559433 TRIM43BA6NCK2 446 aa14.56□□□□□ -0.08
LRRC28-214ENST00000559433 GCOM1H8Y6P7 765 aaPredicted RBP14.56□□□□□ -0.08
LRRC28-214ENST00000559433 NKRFO15226 690 aaKnown RBP eCLIP14.56□□□□□ -0.08
LRRC28-214ENST00000559433 REC8O95072 547 aa14.56□□□□□ -0.08
LRRC28-214ENST00000559433 POLR2MP0CAP2 368 aa14.56□□□□□ -0.08
LRRC28-214ENST00000559433 TXNP10599 105 aaKnown RBP14.56□□□□□ -0.08
LRRC28-214ENST00000559433 SMARCA1P28370 1054 aa14.56□□□□□ -0.08
LRRC28-214ENST00000559433 HOXA13P31271 388 aaPredicted RBP14.56□□□□□ -0.08
LRRC28-214ENST00000559433 TTLL4Q14679 1199 aa14.56□□□□□ -0.08
LRRC28-214ENST00000559433 SYNE3Q6ZMZ3 975 aa14.56□□□□□ -0.08
LRRC28-214ENST00000559433 SEPT14Q6ZU15 432 aa14.56□□□□□ -0.08
LRRC28-214ENST00000559433 ANKRD33Q7Z3H0 272 aa14.56□□□□□ -0.08
LRRC28-214ENST00000559433 CMTR1Q8N1G2 835 aaKnown RBP14.56□□□□□ -0.08
LRRC28-214ENST00000559433 SAMD3Q8N6K7 520 aa14.56□□□□□ -0.08
LRRC28-214ENST00000559433 BADQ92934 168 aa14.56□□□□□ -0.08
LRRC28-214ENST00000559433 TRIM43Q96BQ3 446 aaPredicted RBP14.56□□□□□ -0.08
LRRC28-214ENST00000559433 MYH7BA7E2Y1 1941 aa14.56□□□□□ -0.08
LRRC28-214ENST00000559433 ARVCFO00192 962 aa14.55□□□□□ -0.08
LRRC28-214ENST00000559433 ARIH2O95376 493 aa14.55□□□□□ -0.08
LRRC28-214ENST00000559433 NR3C2P08235 984 aa14.55□□□□□ -0.08
LRRC28-214ENST00000559433 HMGB1P09429 215 aaKnown RBP14.55□□□□□ -0.08
LRRC28-214ENST00000559433 HSPA4P34932 840 aa14.55□□□□□ -0.08
LRRC28-214ENST00000559433 CPT1AP50416 773 aa14.55□□□□□ -0.08
LRRC28-214ENST00000559433 EXOSC10Q01780 885 aaKnown RBP14.55□□□□□ -0.08
LRRC28-214ENST00000559433 APOA5Q6Q788 366 aa14.55□□□□□ -0.08
LRRC28-214ENST00000559433 SRBD1Q8N5C6 995 aaKnown RBP14.55□□□□□ -0.08
LRRC28-214ENST00000559433 FANCBQ8NB91 859 aa14.55□□□□□ -0.08
LRRC28-214ENST00000559433 COPS5Q92905 334 aa14.55□□□□□ -0.08
LRRC28-214ENST00000559433 SEZ6LQ9BYH1 1024 aa14.55□□□□□ -0.08
LRRC28-214ENST00000559433 KIAA0355O15063 1070 aa14.54□□□□□ -0.08
LRRC28-214ENST00000559433 EIF3JO75822 258 aaKnown RBP14.54□□□□□ -0.08
LRRC28-214ENST00000559433 MYL3P08590 195 aa14.54□□□□□ -0.08
LRRC28-214ENST00000559433 MYCLP12524 364 aaPredicted RBP14.54□□□□□ -0.08
LRRC28-214ENST00000559433 CDK7P50613 346 aa14.54□□□□□ -0.08
LRRC28-214ENST00000559433 PSMC6P62333 389 aa14.54□□□□□ -0.08
LRRC28-214ENST00000559433 FGD1P98174 961 aa14.54□□□□□ -0.08
LRRC28-214ENST00000559433 FAAP100Q0VG06 881 aa14.54□□□□□ -0.08
LRRC28-214ENST00000559433 LRIT3Q3SXY7 679 aa14.54□□□□□ -0.08
LRRC28-214ENST00000559433 TMTC3Q6ZXV5 915 aa14.54□□□□□ -0.08
LRRC28-214ENST00000559433 FCHSD1Q86WN1 690 aa14.54□□□□□ -0.08
LRRC28-214ENST00000559433 KCNB2Q92953 911 aa14.54□□□□□ -0.08
LRRC28-214ENST00000559433 JAKMIP1Q96N16 626 aaKnown RBP14.54□□□□□ -0.08
LRRC28-214ENST00000559433 PDCD2LQ9BRP1 358 aa14.54□□□□□ -0.08
LRRC28-214ENST00000559433 POLR3EQ9NVU0 708 aa14.54□□□□□ -0.08
LRRC28-214ENST00000559433 SNX14Q9Y5W7 946 aa14.54□□□□□ -0.08
LRRC28-214ENST00000559433 LAMA3Q16787 3333 aa14.54□□□□□ -0.08
LRRC28-214ENST00000559433 ZBTB43O43298 467 aa14.53□□□□□ -0.08
LRRC28-214ENST00000559433 CPA1P15085 419 aa14.53□□□□□ -0.08
LRRC28-214ENST00000559433 MKRN4PQ13434 485 aaPredicted RBP14.53□□□□□ -0.08
LRRC28-214ENST00000559433 ITGA7Q13683 1181 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms