RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 BEX3Q00994 111 aa19.54■□□□□ 0.72
PSEN1-224ENST00000559361 SEC23AQ15436 765 aa19.54■□□□□ 0.72
PSEN1-224ENST00000559361 OTOP2Q7RTS6 562 aa19.54■□□□□ 0.72
PSEN1-224ENST00000559361 SGMS1Q86VZ5 419 aa19.54■□□□□ 0.72
PSEN1-224ENST00000559361 FAM133AQ8N9E0 248 aa19.54■□□□□ 0.72
PSEN1-224ENST00000559361 IGDCC4Q8TDY8 1250 aa19.54■□□□□ 0.72
PSEN1-224ENST00000559361 SEZ6LQ9BYH1 1024 aa19.54■□□□□ 0.72
PSEN1-224ENST00000559361 AGXT2Q9BYV1 514 aa19.54■□□□□ 0.72
PSEN1-224ENST00000559361 KAT14Q9H8E8 782 aa19.54■□□□□ 0.72
PSEN1-224ENST00000559361 SH2B2O14492 632 aaPredicted RBP19.53■□□□□ 0.72
PSEN1-224ENST00000559361 CNTN2Q02246 1040 aa19.53■□□□□ 0.72
PSEN1-224ENST00000559361 TNFAIP2Q03169 654 aa19.53■□□□□ 0.72
PSEN1-224ENST00000559361 RCSD1Q6JBY9 416 aa19.53■□□□□ 0.72
PSEN1-224ENST00000559361 CXCL17Q6UXB2 119 aa19.53■□□□□ 0.72
PSEN1-224ENST00000559361 GMCL1P1Q8NEA9 526 aa19.53■□□□□ 0.72
PSEN1-224ENST00000559361 KIFC2Q96AC6 838 aa19.53■□□□□ 0.72
PSEN1-224ENST00000559361 KIF2CQ99661 725 aa19.53■□□□□ 0.72
PSEN1-224ENST00000559361 ZKSCAN3Q9BRR0 538 aa19.53■□□□□ 0.72
PSEN1-224ENST00000559361 NOC4LQ9BVI4 516 aaKnown RBP19.53■□□□□ 0.72
PSEN1-224ENST00000559361 PDRG1Q9NUG6 133 aa19.53■□□□□ 0.72
PSEN1-224ENST00000559361 CLIP2Q9UDT6 1046 aa19.53■□□□□ 0.72
PSEN1-224ENST00000559361 FEM1BQ9UK73 627 aa19.53■□□□□ 0.72
PSEN1-224ENST00000559361 NMT2O60551 498 aa19.52■□□□□ 0.72
PSEN1-224ENST00000559361 POU3F3P20264 500 aaPredicted RBP19.52■□□□□ 0.72
PSEN1-224ENST00000559361 SLC4A3P48751 1232 aa19.52■□□□□ 0.72
PSEN1-224ENST00000559361 RCAN1P53805 252 aa19.52■□□□□ 0.72
PSEN1-224ENST00000559361 ITGA7Q13683 1181 aa19.52■□□□□ 0.72
PSEN1-224ENST00000559361 FAM122AQ96E09 287 aa19.52■□□□□ 0.72
PSEN1-224ENST00000559361 UPF3BQ9BZI7 483 aaKnown RBP19.52■□□□□ 0.72
PSEN1-224ENST00000559361 WNT8AQ9H1J5 351 aa19.52■□□□□ 0.72
PSEN1-224ENST00000559361 LY9Q9HBG7 655 aa19.52■□□□□ 0.72
PSEN1-224ENST00000559361 ST18O60284 1047 aa19.51■□□□□ 0.71
PSEN1-224ENST00000559361 FDX1P10109 184 aa19.51■□□□□ 0.71
PSEN1-224ENST00000559361 NEK4P51957 841 aa19.51■□□□□ 0.71
PSEN1-224ENST00000559361 RABGGTBP53611 331 aa19.51■□□□□ 0.71
PSEN1-224ENST00000559361 CCL23P55773 120 aa19.51■□□□□ 0.71
PSEN1-224ENST00000559361 CHST3Q7LGC8 479 aa19.51■□□□□ 0.71
PSEN1-224ENST00000559361 NECAB3Q96P71 396 aaPredicted RBP19.51■□□□□ 0.71
PSEN1-224ENST00000559361 TMEM47Q9BQJ4 181 aa19.51■□□□□ 0.71
PSEN1-224ENST00000559361 C1QTNF1Q9BXJ1 281 aa19.51■□□□□ 0.71
PSEN1-224ENST00000559361 TSPYL2Q9H2G4 693 aaPredicted RBP19.51■□□□□ 0.71
PSEN1-224ENST00000559361 CTDP1Q9Y5B0 961 aaPredicted RBP19.51■□□□□ 0.71
PSEN1-224ENST00000559361 PCDHA11Q9Y5I1 949 aa19.51■□□□□ 0.71
PSEN1-224ENST00000559361 SOWAHBA6NEL2 793 aa19.5■□□□□ 0.71
PSEN1-224ENST00000559361 CCDC69A6NI79 296 aa19.5■□□□□ 0.71
PSEN1-224ENST00000559361 B4GALT4O60513 344 aa19.5■□□□□ 0.71
PSEN1-224ENST00000559361 DDAH1O94760 285 aa19.5■□□□□ 0.71
PSEN1-224ENST00000559361 CALM1P0DP23 149 aa19.5■□□□□ 0.71
PSEN1-224ENST00000559361 CALM2P0DP24 149 aa19.5■□□□□ 0.71
PSEN1-224ENST00000559361 CALM3P0DP25 149 aa19.5■□□□□ 0.71
PSEN1-224ENST00000559361 MYOGP15173 224 aa19.5■□□□□ 0.71
PSEN1-224ENST00000559361 FSCN1Q16658 493 aaKnown RBP19.5■□□□□ 0.71
PSEN1-224ENST00000559361 SYNE3Q6ZMZ3 975 aa19.5■□□□□ 0.71
PSEN1-224ENST00000559361 NFXL1Q6ZNB6 911 aa19.5■□□□□ 0.71
PSEN1-224ENST00000559361 Q6ZUG5 572 aa19.5■□□□□ 0.71
PSEN1-224ENST00000559361 CATIPQ7Z7H3 387 aa19.5■□□□□ 0.71
PSEN1-224ENST00000559361 RPUSD2Q8IZ73 545 aaKnown RBP19.5■□□□□ 0.71
PSEN1-224ENST00000559361 PNMA1Q8ND90 353 aa19.5■□□□□ 0.71
PSEN1-224ENST00000559361 GMCL1Q96IK5 515 aa19.5■□□□□ 0.71
PSEN1-224ENST00000559361 AGBL1Q96MI9 1066 aa19.5■□□□□ 0.71
PSEN1-224ENST00000559361 MAP3K14Q99558 947 aa19.5■□□□□ 0.71
PSEN1-224ENST00000559361 TRPV6Q9H1D0 765 aa19.5■□□□□ 0.71
PSEN1-224ENST00000559361 Q9Y3F1 56 aa19.5■□□□□ 0.71
PSEN1-224ENST00000559361 SLC4A7Q9Y6M7 1214 aa19.5■□□□□ 0.71
PSEN1-224ENST00000559361 LRRC37A2A6NM11 1700 aa19.49■□□□□ 0.71
PSEN1-224ENST00000559361 HOXD11P31277 338 aaPredicted RBP19.49■□□□□ 0.71
PSEN1-224ENST00000559361 MCM2P49736 904 aa19.49■□□□□ 0.71
PSEN1-224ENST00000559361 EVCP57679 992 aa19.49■□□□□ 0.71
PSEN1-224ENST00000559361 TFF2Q03403 129 aa19.49■□□□□ 0.71
PSEN1-224ENST00000559361 PPP2R2DQ66LE6 453 aa19.49■□□□□ 0.71
PSEN1-224ENST00000559361 TLK2Q86UE8 772 aa19.49■□□□□ 0.71
PSEN1-224ENST00000559361 ACAD9Q9H845 621 aa19.49■□□□□ 0.71
PSEN1-224ENST00000559361 A1CFQ9NQ94 594 aaKnown RBP19.49■□□□□ 0.71
PSEN1-224ENST00000559361 ARIH1Q9Y4X5 557 aaPredicted RBP19.49■□□□□ 0.71
PSEN1-224ENST00000559361 SLC12A7Q9Y666 1083 aa19.49■□□□□ 0.71
PSEN1-224ENST00000559361 ZNF536O15090 1300 aa19.49■□□□□ 0.71
PSEN1-224ENST00000559361 ASB14A6NK59 587 aa19.48■□□□□ 0.71
PSEN1-224ENST00000559361 SMPD1P17405 629 aa19.48■□□□□ 0.71
PSEN1-224ENST00000559361 PPP2R5BQ15173 497 aa19.48■□□□□ 0.71
PSEN1-224ENST00000559361 AAK1Q2M2I8 961 aa19.48■□□□□ 0.71
PSEN1-224ENST00000559361 TAPT1Q6NXT6 567 aa19.48■□□□□ 0.71
PSEN1-224ENST00000559361 LRRC47Q8N1G4 583 aaKnown RBP19.48■□□□□ 0.71
PSEN1-224ENST00000559361 DCAF4Q8WV16 495 aa19.48■□□□□ 0.71
PSEN1-224ENST00000559361 SCN5AQ14524 2016 aa19.47■□□□□ 0.71
PSEN1-224ENST00000559361 DYNC1LI2O43237 492 aaPredicted RBP19.47■□□□□ 0.71
PSEN1-224ENST00000559361 ZEB2O60315 1214 aa19.47■□□□□ 0.71
PSEN1-224ENST00000559361 SNHG28P0DPA3 235 aa19.47■□□□□ 0.71
PSEN1-224ENST00000559361 BMP3P12645 472 aa19.47■□□□□ 0.71
PSEN1-224ENST00000559361 CPA1P15085 419 aa19.47■□□□□ 0.71
PSEN1-224ENST00000559361 PTGS1P23219 599 aa19.47■□□□□ 0.71
PSEN1-224ENST00000559361 COL9A3Q14050 684 aaPredicted RBP19.47■□□□□ 0.71
PSEN1-224ENST00000559361 IQSEC1Q6DN90 963 aa19.47■□□□□ 0.71
PSEN1-224ENST00000559361 NOL8Q76FK4 1167 aaKnown RBP19.47■□□□□ 0.71
PSEN1-224ENST00000559361 TET1Q8NFU7 2136 aa19.47■□□□□ 0.71
PSEN1-224ENST00000559361 BRF1Q92994 677 aa19.47■□□□□ 0.71
PSEN1-224ENST00000559361 TCEANC2Q96MN5 208 aa19.47■□□□□ 0.71
PSEN1-224ENST00000559361 LRRC2Q9BYS8 371 aa19.47■□□□□ 0.71
PSEN1-224ENST00000559361 AP5M1Q9H0R1 490 aa19.47■□□□□ 0.71
PSEN1-224ENST00000559361 HOMER2Q9NSB8 354 aa19.47■□□□□ 0.71
PSEN1-224ENST00000559361 MTCH2Q9Y6C9 303 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms