RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 PNMA5Q96PV4 448 aa18.47■□□□□ 0.55
SPG11-215ENST00000559193 MTMR9Q96QG7 549 aa18.47■□□□□ 0.55
SPG11-215ENST00000559193 ARHGAP20Q9P2F6 1191 aa18.47■□□□□ 0.55
SPG11-215ENST00000559193 ZC3H4Q9UPT8 1303 aaKnown RBP18.47■□□□□ 0.55
SPG11-215ENST00000559193 TNNT3P45378 269 aaPredicted RBP18.46■□□□□ 0.55
SPG11-215ENST00000559193 ORC2Q13416 577 aaPredicted RBP18.46■□□□□ 0.55
SPG11-215ENST00000559193 VWA3BQ502W6 1294 aa18.46■□□□□ 0.55
SPG11-215ENST00000559193 SMCR8Q8TEV9 937 aaPredicted RBP18.46■□□□□ 0.55
SPG11-215ENST00000559193 CCDC42Q96M95 316 aa18.46■□□□□ 0.55
SPG11-215ENST00000559193 HPCAL4Q9UM19 191 aa18.46■□□□□ 0.55
SPG11-215ENST00000559193 PLAGL2Q9UPG8 496 aa18.46■□□□□ 0.55
SPG11-215ENST00000559193 ESYT2A0FGR8 921 aa18.46■□□□□ 0.55
SPG11-215ENST00000559193 ZMYND10O75800 440 aa18.46■□□□□ 0.55
SPG11-215ENST00000559193 MAP9Q49MG5 647 aa18.46■□□□□ 0.55
SPG11-215ENST00000559193 SV2BQ7L1I2 683 aa18.46■□□□□ 0.55
SPG11-215ENST00000559193 TEX11Q8IYF3 940 aa18.46■□□□□ 0.55
SPG11-215ENST00000559193 TSGA10Q9BZW7 698 aa18.46■□□□□ 0.55
SPG11-215ENST00000559193 CAPN6Q9Y6Q1 641 aa18.46■□□□□ 0.55
SPG11-215ENST00000559193 SYF2O95926 243 aaKnown RBP18.45■□□□□ 0.54
SPG11-215ENST00000559193 MYBL2P10244 700 aa18.45■□□□□ 0.54
SPG11-215ENST00000559193 SMARCA1P28370 1054 aa18.45■□□□□ 0.54
SPG11-215ENST00000559193 UNC13DQ70J99 1090 aa18.45■□□□□ 0.54
SPG11-215ENST00000559193 GSPT2Q8IYD1 628 aaKnown RBP18.45■□□□□ 0.54
SPG11-215ENST00000559193 ARHGEF1Q92888 912 aaKnown RBP18.45■□□□□ 0.54
SPG11-215ENST00000559193 IQCDQ96DY2 449 aa18.45■□□□□ 0.54
SPG11-215ENST00000559193 UBA5Q9GZZ9 404 aa18.45■□□□□ 0.54
SPG11-215ENST00000559193 NDST4Q9H3R1 872 aa18.45■□□□□ 0.54
SPG11-215ENST00000559193 JADE2Q9NQC1 790 aa18.45■□□□□ 0.54
SPG11-215ENST00000559193 USP17L5A8MUK1 530 aa18.45■□□□□ 0.54
SPG11-215ENST00000559193 SLC37A4O43826 429 aa18.45■□□□□ 0.54
SPG11-215ENST00000559193 EDIL3O43854 480 aa18.45■□□□□ 0.54
SPG11-215ENST00000559193 C2orf54Q08AI8 447 aa18.45■□□□□ 0.54
SPG11-215ENST00000559193 SPA17Q15506 151 aa18.45■□□□□ 0.54
SPG11-215ENST00000559193 CCDC96Q2M329 555 aa18.45■□□□□ 0.54
SPG11-215ENST00000559193 SH2D4AQ9H788 454 aa18.45■□□□□ 0.54
SPG11-215ENST00000559193 FAM207AQ9NSI2 230 aaPredicted RBP18.45■□□□□ 0.54
SPG11-215ENST00000559193 STK17AQ9UEE5 414 aa18.45■□□□□ 0.54
SPG11-215ENST00000559193 GPR75-ASB3A0A0A6YYF3 556 aa18.44■□□□□ 0.54
SPG11-215ENST00000559193 RNF40O75150 1001 aa18.44■□□□□ 0.54
SPG11-215ENST00000559193 CALCRLQ16602 461 aa18.44■□□□□ 0.54
SPG11-215ENST00000559193 C2CD5Q86YS7 1000 aa18.44■□□□□ 0.54
SPG11-215ENST00000559193 FNBP4Q8N3X1 1017 aaPredicted RBP18.44■□□□□ 0.54
SPG11-215ENST00000559193 COG1Q8WTW3 980 aa18.44■□□□□ 0.54
SPG11-215ENST00000559193 LARP4BQ92615 738 aaKnown RBP18.44■□□□□ 0.54
SPG11-215ENST00000559193 FAM204AQ9H8W3 233 aa18.44■□□□□ 0.54
SPG11-215ENST00000559193 SNX12Q9UMY4 172 aa18.44■□□□□ 0.54
SPG11-215ENST00000559193 PVALEFA0A1B0GWK0 134 aa18.44■□□□□ 0.54
SPG11-215ENST00000559193 NOVP48745 357 aa18.44■□□□□ 0.54
SPG11-215ENST00000559193 FXR2P51116 673 aaKnown RBP eCLIP18.44■□□□□ 0.548e-7■□□□□ 9.1
SPG11-215ENST00000559193 DYMQ7RTS9 669 aa18.44■□□□□ 0.54
SPG11-215ENST00000559193 IFIH1Q9BYX4 1025 aaKnown RBP18.44■□□□□ 0.54
SPG11-215ENST00000559193 RIOX1Q9H6W3 641 aa18.44■□□□□ 0.54
SPG11-215ENST00000559193 MLXIPQ9HAP2 919 aa18.44■□□□□ 0.54
SPG11-215ENST00000559193 CWC15Q9P013 229 aaKnown RBP18.44■□□□□ 0.54
SPG11-215ENST00000559193 RTCBQ9Y3I0 505 aaKnown RBP18.44■□□□□ 0.54
SPG11-215ENST00000559193 PCDHA13Q9Y5I0 950 aa18.44■□□□□ 0.54
SPG11-215ENST00000559193 A0A0U1RQG5 324 aaPredicted RBP18.43■□□□□ 0.54
SPG11-215ENST00000559193 TDP2O95551 362 aa18.43■□□□□ 0.54
SPG11-215ENST00000559193 KIF11P52732 1056 aa18.43■□□□□ 0.54
SPG11-215ENST00000559193 MAN2A1Q16706 1144 aa18.43■□□□□ 0.54
SPG11-215ENST00000559193 LEKR1Q6ZMV7 388 aa18.43■□□□□ 0.54
SPG11-215ENST00000559193 C15orf52Q6ZUT6 534 aaKnown RBP18.43■□□□□ 0.54
SPG11-215ENST00000559193 CREG2Q8IUH2 290 aa18.43■□□□□ 0.54
SPG11-215ENST00000559193 TRIM58Q8NG06 486 aa18.43■□□□□ 0.54
SPG11-215ENST00000559193 FRMPD2Q68DX3 1309 aaPredicted RBP18.43■□□□□ 0.54
SPG11-215ENST00000559193 RPS6KA5O75582 802 aa18.43■□□□□ 0.54
SPG11-215ENST00000559193 PRPF6O94906 941 aaKnown RBP18.43■□□□□ 0.54
SPG11-215ENST00000559193 LCA5LO95447 670 aa18.43■□□□□ 0.54
SPG11-215ENST00000559193 EIF4A3P38919 411 aaKnown RBP18.43■□□□□ 0.54
SPG11-215ENST00000559193 RHBDL3P58872 404 aa18.43■□□□□ 0.54
SPG11-215ENST00000559193 LRRC55Q6ZSA7 311 aa18.43■□□□□ 0.54
SPG11-215ENST00000559193 CERS3Q8IU89 383 aa18.43■□□□□ 0.54
SPG11-215ENST00000559193 GUF1Q8N442 669 aaKnown RBP18.43■□□□□ 0.54
SPG11-215ENST00000559193 GDAP1L1Q96MZ0 367 aa18.43■□□□□ 0.54
SPG11-215ENST00000559193 JRKLQ9Y4A0 524 aa18.43■□□□□ 0.54
SPG11-215ENST00000559193 ABCB11O95342 1321 aa18.42■□□□□ 0.54
SPG11-215ENST00000559193 POTEMA6NI47 508 aa18.42■□□□□ 0.54
SPG11-215ENST00000559193 GPSM2P81274 684 aa18.42■□□□□ 0.54
SPG11-215ENST00000559193 CCNI2Q6ZMN8 369 aaPredicted RBP18.42■□□□□ 0.54
SPG11-215ENST00000559193 CD209Q9NNX6 404 aa18.42■□□□□ 0.54
SPG11-215ENST00000559193 LRRC53A6NM62 1247 aa18.42■□□□□ 0.54
SPG11-215ENST00000559193 USO1O60763 962 aaKnown RBP18.42■□□□□ 0.54
SPG11-215ENST00000559193 MOCS3O95396 460 aa18.42■□□□□ 0.54
SPG11-215ENST00000559193 PDHBP11177 359 aa18.42■□□□□ 0.54
SPG11-215ENST00000559193 GPIHBP1Q8IV16 184 aa18.42■□□□□ 0.54
SPG11-215ENST00000559193 RAD54LQ92698 747 aa18.42■□□□□ 0.54
SPG11-215ENST00000559193 COA7Q96BR5 231 aa18.42■□□□□ 0.54
SPG11-215ENST00000559193 CDK5RAP3Q96JB5 506 aa18.42■□□□□ 0.54
SPG11-215ENST00000559193 NUDT12Q9BQG2 462 aa18.42■□□□□ 0.54
SPG11-215ENST00000559193 SELENOOQ9BVL4 669 aa18.42■□□□□ 0.54
SPG11-215ENST00000559193 MMRN2Q9H8L6 949 aa18.42■□□□□ 0.54
SPG11-215ENST00000559193 LCMT1Q9UIC8 334 aa18.42■□□□□ 0.54
SPG11-215ENST00000559193 NHSQ6T4R5 1651 aa18.42■□□□□ 0.54
SPG11-215ENST00000559193 TACC1O75410 805 aa18.41■□□□□ 0.54
SPG11-215ENST00000559193 IQCEQ6IPM2 695 aa18.41■□□□□ 0.54
SPG11-215ENST00000559193 ZNF572Q7Z3I7 529 aaPredicted RBP18.41■□□□□ 0.54
SPG11-215ENST00000559193 KCNK18Q7Z418 384 aa18.41■□□□□ 0.54
SPG11-215ENST00000559193 GLIS3Q8NEA6 775 aa18.41■□□□□ 0.54
SPG11-215ENST00000559193 BAP1Q92560 729 aa18.41■□□□□ 0.54
SPG11-215ENST00000559193 hCG_1984214I3L0E3 225 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms