RNA–Protein interactions for RNA: ENST00000558963.2

AC087516.2-201, humanhuman

TSL 3 BASIC

Gene AC087516.2, Length 3,042 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087516.2-201ENST00000558963 UBXN1Q04323 297 aa7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 ZCWPW2Q504Y3 356 aa7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 KRT27Q7Z3Y8 459 aa7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 C1orf131Q8NDD1 294 aaKnown RBP7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 RRP36Q96EU6 259 aaKnown RBP7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 C8orf37Q96NL8 207 aa7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 RAB34Q9BZG1 259 aa7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 MKNK2Q9HBH9 465 aa7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 VPS18Q9P253 973 aa7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 MAGEC2Q9UBF1 373 aaPredicted RBP7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 TSKSQ9UJT2 592 aa7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 KDM3AQ9Y4C1 1321 aa7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 USP17L8P0C7I0 530 aa7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 TSPY3P0CV98 308 aa7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 TSPY8P0CW00 308 aa7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 STAG2Q8N3U4 1231 aa7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 RNF10Q8N5U6 811 aaKnown RBP7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 SH3RF3Q8TEJ3 882 aaPredicted RBP7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 LRRC15Q8TF66 581 aa7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 CEP63Q96MT8 703 aa7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 NUP88Q99567 741 aaPredicted RBP7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 TUBGCP2Q9BSJ2 902 aa7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 TRIM34Q9BYJ4 488 aa7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 TAB2Q9NYJ8 693 aa7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 FAN1Q9Y2M0 1017 aa7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 GDAQ9Y2T3 454 aa7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 RTCBQ9Y3I0 505 aaKnown RBP7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 COL11A2P13942 1736 aaPredicted RBP7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 CYP3A7-CYP3A51PA0A087WV96 503 aa7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 FRMD3A2A2Y4 597 aa7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 KLRF2D3W0D1 207 aa7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 RNF225M0QZC1 329 aaPredicted RBP7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 ADAMTS3O15072 1205 aa7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 ZPR1O75312 459 aa7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 BBOX1O75936 387 aa7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 GNA14O95837 355 aa7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 PLCG1P19174 1290 aa7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 CYP3A7P24462 503 aa7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 CORO7P57737 925 aa7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 NNTQ13423 1086 aa7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 MAN2A1Q16706 1144 aa7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 ASTE1Q2TB18 679 aaPredicted RBP7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 HSP90B2PQ58FF3 399 aa7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 FAM47AQ5JRC9 791 aa7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 FAM196AQ6ZSG2 479 aa7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 ZNF444Q8N0Y2 327 aaPredicted RBP7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 CCDC82Q8N4S0 544 aa7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 GOLGA6L1Q8N7Z2 621 aa7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 TRIM58Q8NG06 486 aa7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 PUF60Q9UHX1 559 aaKnown RBP7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 LCMT1Q9UIC8 334 aa7.19□□□□□ -1.26
AC087516.2-201ENST00000558963 PITPNM2Q9BZ72 1349 aa7.18□□□□□ -1.26
AC087516.2-201ENST00000558963 PPFIA4O75335 1185 aa7.18□□□□□ -1.26
AC087516.2-201ENST00000558963 SYF2O95926 243 aaKnown RBP7.18□□□□□ -1.26
AC087516.2-201ENST00000558963 CDK8P49336 464 aa7.18□□□□□ -1.26
AC087516.2-201ENST00000558963 PMS1P54277 932 aaKnown RBP7.18□□□□□ -1.26
AC087516.2-201ENST00000558963 STX17P56962 302 aa7.18□□□□□ -1.26
AC087516.2-201ENST00000558963 MCM6Q14566 821 aa7.18□□□□□ -1.26
AC087516.2-201ENST00000558963 GLE1Q53GS7 698 aaKnown RBP7.18□□□□□ -1.26
AC087516.2-201ENST00000558963 KLHL10Q6JEL2 608 aa7.18□□□□□ -1.26
AC087516.2-201ENST00000558963 LRRC31Q6UY01 552 aa7.18□□□□□ -1.26
AC087516.2-201ENST00000558963 LRRC55Q6ZSA7 311 aa7.18□□□□□ -1.26
AC087516.2-201ENST00000558963 SMYD4Q8IYR2 804 aaPredicted RBP7.18□□□□□ -1.26
AC087516.2-201ENST00000558963 BLZF1Q9H2G9 400 aa7.18□□□□□ -1.26
AC087516.2-201ENST00000558963 YY1AP1Q9H869 796 aa7.18□□□□□ -1.26
AC087516.2-201ENST00000558963 BLOC1S4Q9NUP1 217 aa7.18□□□□□ -1.26
AC087516.2-201ENST00000558963 FBXL5Q9UKA1 691 aa7.18□□□□□ -1.26
AC087516.2-201ENST00000558963 JRKLQ9Y4A0 524 aa7.18□□□□□ -1.26
AC087516.2-201ENST00000558963 SLX4Q8IY92 1834 aa7.18□□□□□ -1.26
AC087516.2-201ENST00000558963 A0A0U1RQJ8 604 aa7.18□□□□□ -1.26
AC087516.2-201ENST00000558963 A6NNZ2 444 aa7.18□□□□□ -1.26
AC087516.2-201ENST00000558963 LRRIQ3A6PVS8 624 aaPredicted RBP7.18□□□□□ -1.26
AC087516.2-201ENST00000558963 VEGFAP15692 232 aaPredicted RBP7.18□□□□□ -1.26
AC087516.2-201ENST00000558963 GRB10Q13322 594 aa7.18□□□□□ -1.26
AC087516.2-201ENST00000558963 NFIL3Q16649 462 aa7.18□□□□□ -1.26
AC087516.2-201ENST00000558963 TSR1Q2NL82 804 aaKnown RBP7.18□□□□□ -1.26
AC087516.2-201ENST00000558963 TUBB8Q3ZCM7 444 aa7.18□□□□□ -1.26
AC087516.2-201ENST00000558963 EMC10Q5UCC4 262 aa7.18□□□□□ -1.26
AC087516.2-201ENST00000558963 REXO1Q8N1G1 1221 aaKnown RBP7.18□□□□□ -1.26
AC087516.2-201ENST00000558963 CSGALNACT2Q8N6G5 542 aa7.18□□□□□ -1.26
AC087516.2-201ENST00000558963 KIAA0895Q8NCT3 520 aa7.18□□□□□ -1.26
AC087516.2-201ENST00000558963 ACRBPQ8NEB7 543 aa7.18□□□□□ -1.26
AC087516.2-201ENST00000558963 ATRIPQ8WXE1 791 aa7.18□□□□□ -1.26
AC087516.2-201ENST00000558963 CALML4Q96GE6 196 aa7.18□□□□□ -1.26
AC087516.2-201ENST00000558963 ACSBG1Q96GR2 724 aa7.18□□□□□ -1.26
AC087516.2-201ENST00000558963 TRIM47Q96LD4 638 aa7.18□□□□□ -1.26
AC087516.2-201ENST00000558963 CNOT6LQ96LI5 555 aaKnown RBP7.18□□□□□ -1.26
AC087516.2-201ENST00000558963 FAM107BQ9H098 131 aa7.18□□□□□ -1.26
AC087516.2-201ENST00000558963 SAR1BQ9Y6B6 198 aa7.18□□□□□ -1.26
AC087516.2-201ENST00000558963 ATXN2Q99700 1313 aaKnown RBP7.17□□□□□ -1.26
AC087516.2-201ENST00000558963 NUTM2BA6NNL0 878 aaPredicted RBP7.17□□□□□ -1.26
AC087516.2-201ENST00000558963 NUTM2EB1AL46 878 aaPredicted RBP7.17□□□□□ -1.26
AC087516.2-201ENST00000558963 TBX3O15119 743 aa7.17□□□□□ -1.26
AC087516.2-201ENST00000558963 KCNQ2O43526 872 aa7.17□□□□□ -1.26
AC087516.2-201ENST00000558963 PDHBP11177 359 aa7.17□□□□□ -1.26
AC087516.2-201ENST00000558963 CASP1P29466 404 aa7.17□□□□□ -1.26
AC087516.2-201ENST00000558963 CCT6AP40227 531 aaKnown RBP7.17□□□□□ -1.26
AC087516.2-201ENST00000558963 GYS2P54840 703 aa7.17□□□□□ -1.26
AC087516.2-201ENST00000558963 TXNRD1Q16881 649 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms