RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 MYL10Q9BUA6 226 aa13.03□□□□□ -0.32
BMP4-204ENST00000558961 WDR11Q9BZH6 1224 aa13.03□□□□□ -0.32
BMP4-204ENST00000558961 PCDHA1Q9Y5I3 950 aa13.03□□□□□ -0.32
BMP4-204ENST00000558961 MROH7Q68CQ1 1323 aa13.03□□□□□ -0.32
BMP4-204ENST00000558961 A0A0U1RQG5 324 aaPredicted RBP13.02□□□□□ -0.33
BMP4-204ENST00000558961 CCDC69A6NI79 296 aa13.02□□□□□ -0.33
BMP4-204ENST00000558961 KIAA0355O15063 1070 aa13.02□□□□□ -0.33
BMP4-204ENST00000558961 EPB41L2O43491 1005 aaKnown RBP13.02□□□□□ -0.33
BMP4-204ENST00000558961 CABYRO75952 493 aa13.02□□□□□ -0.33
BMP4-204ENST00000558961 CFBP00751 764 aa13.02□□□□□ -0.33
BMP4-204ENST00000558961 CLTBP09497 229 aa13.02□□□□□ -0.33
BMP4-204ENST00000558961 PTGS1P23219 599 aa13.02□□□□□ -0.33
BMP4-204ENST00000558961 BEX3Q00994 111 aa13.02□□□□□ -0.33
BMP4-204ENST00000558961 EXOSC10Q01780 885 aaKnown RBP13.02□□□□□ -0.33
BMP4-204ENST00000558961 FAAP100Q0VG06 881 aa13.02□□□□□ -0.33
BMP4-204ENST00000558961 KRT32Q14532 448 aa13.02□□□□□ -0.33
BMP4-204ENST00000558961 PPP2R5BQ15173 497 aa13.02□□□□□ -0.33
BMP4-204ENST00000558961 ADCK5Q3MIX3 580 aa13.02□□□□□ -0.33
BMP4-204ENST00000558961 CCDC62Q6P9F0 684 aa13.02□□□□□ -0.33
BMP4-204ENST00000558961 HOMER1Q86YM7 354 aa13.02□□□□□ -0.33
BMP4-204ENST00000558961 TDHQ8IZJ6 230 aa13.02□□□□□ -0.33
BMP4-204ENST00000558961 RMDN3Q96TC7 470 aa13.02□□□□□ -0.33
BMP4-204ENST00000558961 AP5M1Q9H0R1 490 aa13.02□□□□□ -0.33
BMP4-204ENST00000558961 PXMP2Q9NR77 195 aa13.02□□□□□ -0.33
BMP4-204ENST00000558961 PRKAG2Q9UGJ0 569 aa13.02□□□□□ -0.33
BMP4-204ENST00000558961 FRMPD4Q14CM0 1322 aa13.02□□□□□ -0.33
BMP4-204ENST00000558961 TRIM43BA6NCK2 446 aa13.01□□□□□ -0.33
BMP4-204ENST00000558961 ARVCFO00192 962 aa13.01□□□□□ -0.33
BMP4-204ENST00000558961 DYNC1LI2O43237 492 aaPredicted RBP13.01□□□□□ -0.33
BMP4-204ENST00000558961 HSPA4P34932 840 aa13.01□□□□□ -0.33
BMP4-204ENST00000558961 GNAQP50148 359 aa13.01□□□□□ -0.33
BMP4-204ENST00000558961 RCAN1P53805 252 aa13.01□□□□□ -0.33
BMP4-204ENST00000558961 MDM2Q00987 491 aaPredicted RBP13.01□□□□□ -0.33
BMP4-204ENST00000558961 LRIT3Q3SXY7 679 aa13.01□□□□□ -0.33
BMP4-204ENST00000558961 APOA5Q6Q788 366 aa13.01□□□□□ -0.33
BMP4-204ENST00000558961 NOL8Q76FK4 1167 aaKnown RBP13.01□□□□□ -0.33
BMP4-204ENST00000558961 DHX32Q7L7V1 743 aaKnown RBP13.01□□□□□ -0.33
BMP4-204ENST00000558961 SH3RF1Q7Z6J0 888 aa13.01□□□□□ -0.33
BMP4-204ENST00000558961 FAM126BQ8IXS8 530 aa13.01□□□□□ -0.33
BMP4-204ENST00000558961 TRIM43Q96BQ3 446 aaPredicted RBP13.01□□□□□ -0.33
BMP4-204ENST00000558961 SEZ6LQ9BYH1 1024 aa13.01□□□□□ -0.33
BMP4-204ENST00000558961 UBE2OQ9C0C9 1292 aaKnown RBP13.01□□□□□ -0.33
BMP4-204ENST00000558961 PCDH10Q9P2E7 1040 aa13.01□□□□□ -0.33
BMP4-204ENST00000558961 TBX21Q9UL17 535 aa13.01□□□□□ -0.33
BMP4-204ENST00000558961 SLC12A7Q9Y666 1083 aa13.01□□□□□ -0.33
BMP4-204ENST00000558961 GRIN2DO15399 1336 aa13□□□□□ -0.33
BMP4-204ENST00000558961 A6NJR5 290 aa13□□□□□ -0.33
BMP4-204ENST00000558961 ZEB2O60315 1214 aa13□□□□□ -0.33
BMP4-204ENST00000558961 PQBP1O60828 265 aaKnown RBP13□□□□□ -0.33
BMP4-204ENST00000558961 ARIH2O95376 493 aa13□□□□□ -0.33
BMP4-204ENST00000558961 PLEKHA8P1O95397 391 aa13□□□□□ -0.33
BMP4-204ENST00000558961 HMGB1P09429 215 aaKnown RBP13□□□□□ -0.33
BMP4-204ENST00000558961 CPT1AP50416 773 aa13□□□□□ -0.33
BMP4-204ENST00000558961 PURAQ00577 322 aaKnown RBP13□□□□□ -0.33
BMP4-204ENST00000558961 TTLL4Q14679 1199 aa13□□□□□ -0.33
BMP4-204ENST00000558961 STXBP2Q15833 593 aa13□□□□□ -0.33
BMP4-204ENST00000558961 ARHGEF16Q5VV41 709 aa13□□□□□ -0.33
BMP4-204ENST00000558961 CXCL17Q6UXB2 119 aa13□□□□□ -0.33
BMP4-204ENST00000558961 NFXL1Q6ZNB6 911 aa13□□□□□ -0.33
BMP4-204ENST00000558961 TMTC3Q6ZXV5 915 aa13□□□□□ -0.33
BMP4-204ENST00000558961 SRBD1Q8N5C6 995 aaKnown RBP13□□□□□ -0.33
BMP4-204ENST00000558961 RRP36Q96EU6 259 aaKnown RBP13□□□□□ -0.33
BMP4-204ENST00000558961 LBHD1Q9BQE6 289 aaPredicted RBP13□□□□□ -0.33
BMP4-204ENST00000558961 PDCD2LQ9BRP1 358 aa13□□□□□ -0.33
BMP4-204ENST00000558961 LRRC2Q9BYS8 371 aa13□□□□□ -0.33
BMP4-204ENST00000558961 PRDM5Q9NQX1 630 aaPredicted RBP13□□□□□ -0.33
BMP4-204ENST00000558961 LAMA3Q16787 3333 aa13□□□□□ -0.33
BMP4-204ENST00000558961 MYH7BA7E2Y1 1941 aa13□□□□□ -0.33
BMP4-204ENST00000558961 TANC1Q9C0D5 1861 aa12.99□□□□□ -0.33
BMP4-204ENST00000558961 NID2Q14112 1375 aa12.99□□□□□ -0.33
BMP4-204ENST00000558961 DCDC2CA8MYV0 355 aa12.99□□□□□ -0.33
BMP4-204ENST00000558961 EIF3JO75822 258 aaKnown RBP12.99□□□□□ -0.33
BMP4-204ENST00000558961 REC8O95072 547 aa12.99□□□□□ -0.33
BMP4-204ENST00000558961 CD4P01730 458 aa12.99□□□□□ -0.33
BMP4-204ENST00000558961 NR3C2P08235 984 aa12.99□□□□□ -0.33
BMP4-204ENST00000558961 TXNP10599 105 aaKnown RBP12.99□□□□□ -0.33
BMP4-204ENST00000558961 EIF2AK2P19525 551 aaKnown RBP12.99□□□□□ -0.33
BMP4-204ENST00000558961 RXRAP19793 462 aa12.99□□□□□ -0.33
BMP4-204ENST00000558961 ITGB8P26012 769 aa12.99□□□□□ -0.33
BMP4-204ENST00000558961 PGM5Q15124 567 aa12.99□□□□□ -0.33
BMP4-204ENST00000558961 FBXL16Q8N461 479 aa12.99□□□□□ -0.33
BMP4-204ENST00000558961 FANCBQ8NB91 859 aa12.99□□□□□ -0.33
BMP4-204ENST00000558961 OR6J1Q8NGC5 347 aa12.99□□□□□ -0.33
BMP4-204ENST00000558961 POLR3EQ9NVU0 708 aa12.99□□□□□ -0.33
BMP4-204ENST00000558961 CNTNAP5Q8WYK1 1306 aa12.98□□□□□ -0.33
BMP4-204ENST00000558961 GCOM1H8Y6P7 765 aaPredicted RBP12.98□□□□□ -0.33
BMP4-204ENST00000558961 PIK3CDO00329 1044 aa12.98□□□□□ -0.33
BMP4-204ENST00000558961 SOX1O00570 391 aaPredicted RBP12.98□□□□□ -0.33
BMP4-204ENST00000558961 RGS20O76081 388 aa12.98□□□□□ -0.33
BMP4-204ENST00000558961 POLR2MP0CAP2 368 aa12.98□□□□□ -0.33
BMP4-204ENST00000558961 HOXA13P31271 388 aaPredicted RBP12.98□□□□□ -0.33
BMP4-204ENST00000558961 FUT2Q10981 343 aa12.98□□□□□ -0.33
BMP4-204ENST00000558961 ITGA7Q13683 1181 aa12.98□□□□□ -0.33
BMP4-204ENST00000558961 GPR153Q6NV75 609 aa12.98□□□□□ -0.33
BMP4-204ENST00000558961 VSIG10LQ86VR7 867 aa12.98□□□□□ -0.33
BMP4-204ENST00000558961 MICU3Q86XE3 530 aa12.98□□□□□ -0.33
BMP4-204ENST00000558961 IL31RAQ8NI17 732 aa12.98□□□□□ -0.33
BMP4-204ENST00000558961 BADQ92934 168 aa12.98□□□□□ -0.33
BMP4-204ENST00000558961 EMID1Q96A84 441 aaPredicted RBP12.98□□□□□ -0.33
BMP4-204ENST00000558961 AGXT2Q9BYV1 514 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms