RNA–Protein interactions for RNA: ENST00000558937.1

SMAD6-203, Transcript of SMAD family member 6, humanhuman

TSL 5

Gene SMAD6, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-203ENST00000558937 SART3Q15020 963 aaKnown RBP17.57■□□□□ 0.4
SMAD6-203ENST00000558937 NSUN6Q8TEA1 469 aaKnown RBP17.57■□□□□ 0.4
SMAD6-203ENST00000558937 SEZ6LQ9BYH1 1024 aa17.57■□□□□ 0.4
SMAD6-203ENST00000558937 LSG1Q9H089 658 aaKnown RBP17.57■□□□□ 0.4
SMAD6-203ENST00000558937 CFBP00751 764 aa17.56■□□□□ 0.4
SMAD6-203ENST00000558937 TXNP10599 105 aaKnown RBP17.56■□□□□ 0.4
SMAD6-203ENST00000558937 SMAD3P84022 425 aaKnown RBP17.56■□□□□ 0.4
SMAD6-203ENST00000558937 PURAQ00577 322 aaKnown RBP17.56■□□□□ 0.4
SMAD6-203ENST00000558937 TTLL4Q14679 1199 aa17.56■□□□□ 0.4
SMAD6-203ENST00000558937 TMEM67Q5HYA8 995 aa17.56■□□□□ 0.4
SMAD6-203ENST00000558937 ZNF697Q5TEC3 545 aa17.56■□□□□ 0.4
SMAD6-203ENST00000558937 SKAP1Q86WV1 359 aa17.56■□□□□ 0.4
SMAD6-203ENST00000558937 HOMER1Q86YM7 354 aa17.56■□□□□ 0.4
SMAD6-203ENST00000558937 RMDN3Q96TC7 470 aa17.56■□□□□ 0.4
SMAD6-203ENST00000558937 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.56■□□□□ 0.44e-7■□□□□ 9
SMAD6-203ENST00000558937 ESYT1Q9BSJ8 1104 aa17.56■□□□□ 0.4
SMAD6-203ENST00000558937 TRPV6Q9H1D0 765 aa17.56■□□□□ 0.4
SMAD6-203ENST00000558937 UMODL1Q5DID0 1318 aa17.55■□□□□ 0.4
SMAD6-203ENST00000558937 B4GALT4O60513 344 aa17.55■□□□□ 0.4
SMAD6-203ENST00000558937 CSF2RAP15509 400 aa17.55■□□□□ 0.4
SMAD6-203ENST00000558937 EIF2AK2P19525 551 aaKnown RBP17.55■□□□□ 0.4
SMAD6-203ENST00000558937 CYP2C18P33260 490 aa17.55■□□□□ 0.4
SMAD6-203ENST00000558937 HSD17B4P51659 736 aa17.55■□□□□ 0.4
SMAD6-203ENST00000558937 GHRHRQ02643 423 aa17.55■□□□□ 0.4
SMAD6-203ENST00000558937 TROAPQ12815 778 aa17.55■□□□□ 0.4
SMAD6-203ENST00000558937 CCDC62Q6P9F0 684 aa17.55■□□□□ 0.4
SMAD6-203ENST00000558937 SEPT14Q6ZU15 432 aa17.55■□□□□ 0.4
SMAD6-203ENST00000558937 TMEM199Q8N511 208 aa17.55■□□□□ 0.4
SMAD6-203ENST00000558937 IGDCC4Q8TDY8 1250 aa17.55■□□□□ 0.4
SMAD6-203ENST00000558937 FAM161BQ96MY7 647 aa17.55■□□□□ 0.4
SMAD6-203ENST00000558937 GUCD1Q96NT3 240 aa17.55■□□□□ 0.4
SMAD6-203ENST00000558937 PIGSQ96S52 555 aa17.55■□□□□ 0.4
SMAD6-203ENST00000558937 MTG1Q9BT17 334 aaPredicted RBP17.55■□□□□ 0.4
SMAD6-203ENST00000558937 HIPK3Q9H422 1215 aa17.55■□□□□ 0.4
SMAD6-203ENST00000558937 RIOX1Q9H6W3 641 aa17.55■□□□□ 0.4
SMAD6-203ENST00000558937 STXBP5LQ9Y2K9 1186 aa17.55■□□□□ 0.4
SMAD6-203ENST00000558937 PCDHA1Q9Y5I3 950 aa17.55■□□□□ 0.4
SMAD6-203ENST00000558937 CYTH3O43739 400 aa17.54■□□□□ 0.4
SMAD6-203ENST00000558937 STXBP2Q15833 593 aa17.54■□□□□ 0.4
SMAD6-203ENST00000558937 BRDTQ58F21 947 aaPredicted RBP17.54■□□□□ 0.4
SMAD6-203ENST00000558937 ARHGEF16Q5VV41 709 aa17.54■□□□□ 0.4
SMAD6-203ENST00000558937 C16orf59Q7L2K0 433 aa17.54■□□□□ 0.4
SMAD6-203ENST00000558937 CENPQQ7L2Z9 268 aaPredicted RBP17.54■□□□□ 0.4
SMAD6-203ENST00000558937 CATIPQ7Z7H3 387 aa17.54■□□□□ 0.4
SMAD6-203ENST00000558937 IWS1Q96ST2 819 aa17.54■□□□□ 0.4
SMAD6-203ENST00000558937 ALDH8A1Q9H2A2 487 aaPredicted RBP17.54■□□□□ 0.4
SMAD6-203ENST00000558937 GPHNQ9NQX3 736 aaPredicted RBP17.54■□□□□ 0.4
SMAD6-203ENST00000558937 PXMP2Q9NR77 195 aa17.54■□□□□ 0.4
SMAD6-203ENST00000558937 A6NJR5 290 aa17.53■□□□□ 0.4
SMAD6-203ENST00000558937 SLC27A2O14975 620 aa17.53■□□□□ 0.4
SMAD6-203ENST00000558937 ACRP10323 421 aa17.53■□□□□ 0.4
SMAD6-203ENST00000558937 TMEM240Q5SV17 173 aa17.53■□□□□ 0.4
SMAD6-203ENST00000558937 NOC4LQ9BVI4 516 aaKnown RBP17.53■□□□□ 0.4
SMAD6-203ENST00000558937 LY9Q9HBG7 655 aa17.53■□□□□ 0.4
SMAD6-203ENST00000558937 PRC1O43663 620 aa17.52■□□□□ 0.4
SMAD6-203ENST00000558937 KPNA6O60684 536 aa17.52■□□□□ 0.4
SMAD6-203ENST00000558937 GH1P01241 217 aa17.52■□□□□ 0.4
SMAD6-203ENST00000558937 NR3C2P08235 984 aa17.52■□□□□ 0.4
SMAD6-203ENST00000558937 HOXA13P31271 388 aaPredicted RBP17.52■□□□□ 0.4
SMAD6-203ENST00000558937 ARHGAP1Q07960 439 aa17.52■□□□□ 0.4
SMAD6-203ENST00000558937 LY6KQ17RY6 165 aa17.52■□□□□ 0.4
SMAD6-203ENST00000558937 BMP2KLQ5H9B9 411 aa17.52■□□□□ 0.4
SMAD6-203ENST00000558937 PSRC1Q6PGN9 363 aaPredicted RBP17.52■□□□□ 0.4
SMAD6-203ENST00000558937 CASC1Q6TDU7 716 aa17.52■□□□□ 0.4
SMAD6-203ENST00000558937 ZNF654Q8IZM8 581 aa17.52■□□□□ 0.4
SMAD6-203ENST00000558937 PDCD2LQ9BRP1 358 aa17.52■□□□□ 0.4
SMAD6-203ENST00000558937 MYL10Q9BUA6 226 aa17.52■□□□□ 0.4
SMAD6-203ENST00000558937 IL23AQ9NPF7 189 aa17.52■□□□□ 0.4
SMAD6-203ENST00000558937 TRMT13Q9NUP7 481 aaKnown RBP17.52■□□□□ 0.4
SMAD6-203ENST00000558937 PNMA6FA0A0J9YX94 578 aa17.51■□□□□ 0.39
SMAD6-203ENST00000558937 DDAH1O94760 285 aa17.51■□□□□ 0.39
SMAD6-203ENST00000558937 MMP3P08254 477 aa17.51■□□□□ 0.39
SMAD6-203ENST00000558937 CCL23P55773 120 aa17.51■□□□□ 0.39
SMAD6-203ENST00000558937 TRAF1Q13077 416 aa17.51■□□□□ 0.39
SMAD6-203ENST00000558937 COL9A3Q14050 684 aaPredicted RBP17.51■□□□□ 0.39
SMAD6-203ENST00000558937 NBPF20Q3BBV1 942 aa17.51■□□□□ 0.39
SMAD6-203ENST00000558937 FAM47CQ5HY64 1035 aa17.51■□□□□ 0.39
SMAD6-203ENST00000558937 CREB3L3Q68CJ9 461 aa17.51■□□□□ 0.39
SMAD6-203ENST00000558937 ZNF365Q70YC5 407 aa17.51■□□□□ 0.39
SMAD6-203ENST00000558937 SAMD3Q8N6K7 520 aa17.51■□□□□ 0.39
SMAD6-203ENST00000558937 PPP1R13LQ8WUF5 828 aa17.51■□□□□ 0.39
SMAD6-203ENST00000558937 AFG1LQ8WV93 481 aa17.51■□□□□ 0.39
SMAD6-203ENST00000558937 MTA3Q9BTC8 594 aa17.51■□□□□ 0.39
SMAD6-203ENST00000558937 WNT8AQ9H1J5 351 aa17.51■□□□□ 0.39
SMAD6-203ENST00000558937 TTYH1Q9H313 450 aaPredicted RBP17.51■□□□□ 0.39
SMAD6-203ENST00000558937 ANO2Q9NQ90 1003 aa17.51■□□□□ 0.39
SMAD6-203ENST00000558937 MAP3K20Q9NYL2 800 aaKnown RBP17.51■□□□□ 0.39
SMAD6-203ENST00000558937 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.5■□□□□ 0.39
SMAD6-203ENST00000558937 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.5■□□□□ 0.39
SMAD6-203ENST00000558937 SH2B2O14492 632 aaPredicted RBP17.5■□□□□ 0.39
SMAD6-203ENST00000558937 EIF3JO75822 258 aaKnown RBP17.5■□□□□ 0.39
SMAD6-203ENST00000558937 CYP2C9P11712 490 aa17.5■□□□□ 0.39
SMAD6-203ENST00000558937 MCM5P33992 734 aa17.5■□□□□ 0.39
SMAD6-203ENST00000558937 NECTIN1Q15223 517 aa17.5■□□□□ 0.39
SMAD6-203ENST00000558937 RASIP1Q5U651 963 aa17.5■□□□□ 0.39
SMAD6-203ENST00000558937 IL31RAQ8NI17 732 aa17.5■□□□□ 0.39
SMAD6-203ENST00000558937 CTCFLQ8NI51 663 aaPredicted RBP17.5■□□□□ 0.39
SMAD6-203ENST00000558937 PIBF1Q8WXW3 757 aa17.5■□□□□ 0.39
SMAD6-203ENST00000558937 MAP3K14Q99558 947 aa17.5■□□□□ 0.39
SMAD6-203ENST00000558937 SEMA6BQ9H3T3 888 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms