RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 SPTBN5Q9NRC6 3674 aaKnown RBP15.85■□□□□ 0.13
VPS18-203ENST00000558855 TLR3O15455 904 aaKnown RBP15.84■□□□□ 0.13
VPS18-203ENST00000558855 MYL3P08590 195 aa15.84■□□□□ 0.13
VPS18-203ENST00000558855 ANTXR2P58335 489 aa15.84■□□□□ 0.13
VPS18-203ENST00000558855 PDE4DQ08499 809 aa15.84■□□□□ 0.13
VPS18-203ENST00000558855 GRIN2CQ14957 1233 aa15.84■□□□□ 0.13
VPS18-203ENST00000558855 CCDC62Q6P9F0 684 aa15.84■□□□□ 0.13
VPS18-203ENST00000558855 CHST3Q7LGC8 479 aa15.84■□□□□ 0.13
VPS18-203ENST00000558855 MTMR8Q96EF0 704 aa15.84■□□□□ 0.13
VPS18-203ENST00000558855 ALDH8A1Q9H2A2 487 aaPredicted RBP15.84■□□□□ 0.13
VPS18-203ENST00000558855 HIPK3Q9H422 1215 aa15.84■□□□□ 0.13
VPS18-203ENST00000558855 GPHNQ9NQX3 736 aaPredicted RBP15.84■□□□□ 0.13
VPS18-203ENST00000558855 ABCB11O95342 1321 aa15.84■□□□□ 0.13
VPS18-203ENST00000558855 RAD50Q92878 1312 aa15.84■□□□□ 0.13
VPS18-203ENST00000558855 LOC102724159A0A0B4J2E5 919 aa15.83■□□□□ 0.12
VPS18-203ENST00000558855 DLL1O00548 723 aa15.83■□□□□ 0.12
VPS18-203ENST00000558855 CYTH3O43739 400 aa15.83■□□□□ 0.12
VPS18-203ENST00000558855 CABYRO75952 493 aa15.83■□□□□ 0.12
VPS18-203ENST00000558855 PARP1P09874 1014 aaKnown RBP15.83■□□□□ 0.12
VPS18-203ENST00000558855 PPIGQ13427 754 aaKnown RBP eCLIP15.83■□□□□ 0.12
VPS18-203ENST00000558855 PPP2R5BQ15173 497 aa15.83■□□□□ 0.12
VPS18-203ENST00000558855 PWP2Q15269 919 aaKnown RBP15.83■□□□□ 0.12
VPS18-203ENST00000558855 IFIT1BQ5T764 474 aaKnown RBP15.83■□□□□ 0.12
VPS18-203ENST00000558855 RGS22Q8NE09 1264 aa15.83■□□□□ 0.12
VPS18-203ENST00000558855 DNERQ8NFT8 737 aa15.83■□□□□ 0.12
VPS18-203ENST00000558855 CTAGE1Q96RT6 745 aa15.83■□□□□ 0.12
VPS18-203ENST00000558855 PBX4Q9BYU1 374 aa15.83■□□□□ 0.12
VPS18-203ENST00000558855 KRT23Q9C075 422 aa15.83■□□□□ 0.12
VPS18-203ENST00000558855 IL23AQ9NPF7 189 aa15.83■□□□□ 0.12
VPS18-203ENST00000558855 CTNNA3Q9UI47 895 aa15.83■□□□□ 0.12
VPS18-203ENST00000558855 VCANP13611 3396 aa15.82■□□□□ 0.12
VPS18-203ENST00000558855 PALM3A6NDB9 673 aaPredicted RBP15.82■□□□□ 0.12
VPS18-203ENST00000558855 SGSM2O43147 1006 aa15.82■□□□□ 0.12
VPS18-203ENST00000558855 EIF2AK2P19525 551 aaKnown RBP15.82■□□□□ 0.12
VPS18-203ENST00000558855 ARHGAP1Q07960 439 aa15.82■□□□□ 0.12
VPS18-203ENST00000558855 LY6KQ17RY6 165 aa15.82■□□□□ 0.12
VPS18-203ENST00000558855 NBPF20Q3BBV1 942 aa15.82■□□□□ 0.12
VPS18-203ENST00000558855 FBXO11Q86XK2 927 aa15.82■□□□□ 0.12
VPS18-203ENST00000558855 USP38Q8NB14 1042 aa15.82■□□□□ 0.12
VPS18-203ENST00000558855 IL31RAQ8NI17 732 aa15.82■□□□□ 0.12
VPS18-203ENST00000558855 ZFP91Q96JP5 570 aaPredicted RBP15.82■□□□□ 0.12
VPS18-203ENST00000558855 UBAC1Q9BSL1 405 aa15.82■□□□□ 0.12
VPS18-203ENST00000558855 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.81■□□□□ 0.12
VPS18-203ENST00000558855 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.81■□□□□ 0.12
VPS18-203ENST00000558855 A6NJR5 290 aa15.81■□□□□ 0.12
VPS18-203ENST00000558855 KLRF2D3W0D1 207 aa15.81■□□□□ 0.12
VPS18-203ENST00000558855 E7EWF7 191 aa15.81■□□□□ 0.12
VPS18-203ENST00000558855 DHX16O60231 1041 aaKnown RBP15.81■□□□□ 0.12
VPS18-203ENST00000558855 RGS20O76081 388 aa15.81■□□□□ 0.12
VPS18-203ENST00000558855 TXNP10599 105 aaKnown RBP15.81■□□□□ 0.12
VPS18-203ENST00000558855 GRM4Q14833 912 aa15.81■□□□□ 0.12
VPS18-203ENST00000558855 CCDC178Q5BJE1 867 aa15.81■□□□□ 0.12
VPS18-203ENST00000558855 SEPT14Q6ZU15 432 aa15.81■□□□□ 0.12
VPS18-203ENST00000558855 TMEM199Q8N511 208 aa15.81■□□□□ 0.12
VPS18-203ENST00000558855 SCFD2Q8WU76 684 aa15.81■□□□□ 0.12
VPS18-203ENST00000558855 CNNM2Q9H8M5 875 aa15.81■□□□□ 0.12
VPS18-203ENST00000558855 YBX2Q9Y2T7 364 aaKnown RBP15.81■□□□□ 0.12
VPS18-203ENST00000558855 ZEB2O60315 1214 aa15.8■□□□□ 0.12
VPS18-203ENST00000558855 CFBP00751 764 aa15.8■□□□□ 0.12
VPS18-203ENST00000558855 HSD17B4P51659 736 aa15.8■□□□□ 0.12
VPS18-203ENST00000558855 GHRHRQ02643 423 aa15.8■□□□□ 0.12
VPS18-203ENST00000558855 OTOP2Q7RTS6 562 aa15.8■□□□□ 0.12
VPS18-203ENST00000558855 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.8■□□□□ 0.12
VPS18-203ENST00000558855 MAFAQ8NHW3 353 aaPredicted RBP15.8■□□□□ 0.12
VPS18-203ENST00000558855 AFG1LQ8WV93 481 aa15.8■□□□□ 0.12
VPS18-203ENST00000558855 HERVK_113Q902F9 699 aa15.8■□□□□ 0.12
VPS18-203ENST00000558855 KAT2BQ92831 832 aa15.8■□□□□ 0.12
VPS18-203ENST00000558855 GPKOWQ92917 476 aaPredicted RBP eCLIP15.8■□□□□ 0.12
VPS18-203ENST00000558855 PIGSQ96S52 555 aa15.8■□□□□ 0.12
VPS18-203ENST00000558855 MTG1Q9BT17 334 aaPredicted RBP15.8■□□□□ 0.12
VPS18-203ENST00000558855 PXMP2Q9NR77 195 aa15.8■□□□□ 0.12
VPS18-203ENST00000558855 POLR3EQ9NVU0 708 aa15.8■□□□□ 0.12
VPS18-203ENST00000558855 COL4A4P53420 1690 aaPredicted RBP15.79■□□□□ 0.12
VPS18-203ENST00000558855 SORBS3O60504 671 aa15.79■□□□□ 0.12
VPS18-203ENST00000558855 MMP3P08254 477 aa15.79■□□□□ 0.12
VPS18-203ENST00000558855 MYOGP15173 224 aa15.79■□□□□ 0.12
VPS18-203ENST00000558855 HOXA13P31271 388 aaPredicted RBP15.79■□□□□ 0.12
VPS18-203ENST00000558855 NT5C2P49902 561 aa15.79■□□□□ 0.12
VPS18-203ENST00000558855 CPT1AP50416 773 aa15.79■□□□□ 0.12
VPS18-203ENST00000558855 RABGGTBP53611 331 aa15.79■□□□□ 0.12
VPS18-203ENST00000558855 TROAPQ12815 778 aa15.79■□□□□ 0.12
VPS18-203ENST00000558855 PSRC1Q6PGN9 363 aaPredicted RBP15.79■□□□□ 0.12
VPS18-203ENST00000558855 HOMER1Q86YM7 354 aa15.79■□□□□ 0.12
VPS18-203ENST00000558855 MB21D2Q8IYB1 491 aaPredicted RBP15.79■□□□□ 0.12
VPS18-203ENST00000558855 TIFAQ96CG3 184 aa15.79■□□□□ 0.12
VPS18-203ENST00000558855 RMDN3Q96TC7 470 aa15.79■□□□□ 0.12
VPS18-203ENST00000558855 COL25A1Q9BXS0 654 aaPredicted RBP15.79■□□□□ 0.12
VPS18-203ENST00000558855 BCAS3Q9H6U6 928 aa15.79■□□□□ 0.12
VPS18-203ENST00000558855 PNMA2Q9UL42 364 aa15.79■□□□□ 0.12
VPS18-203ENST00000558855 MYO9BQ13459 2157 aa15.79■□□□□ 0.12
VPS18-203ENST00000558855 IFIT3O14879 490 aaKnown RBP15.78■□□□□ 0.12
VPS18-203ENST00000558855 NKRFO15226 690 aaKnown RBP eCLIP15.78■□□□□ 0.12
VPS18-203ENST00000558855 FOSL2P15408 326 aa15.78■□□□□ 0.12
VPS18-203ENST00000558855 TTLL4Q14679 1199 aa15.78■□□□□ 0.12
VPS18-203ENST00000558855 FAM47CQ5HY64 1035 aa15.78■□□□□ 0.12
VPS18-203ENST00000558855 NSUN6Q8TEA1 469 aaKnown RBP15.78■□□□□ 0.12
VPS18-203ENST00000558855 DHX38Q92620 1227 aaKnown RBP15.78■□□□□ 0.12
VPS18-203ENST00000558855 MAP4K1Q92918 833 aa15.78■□□□□ 0.12
VPS18-203ENST00000558855 MYL10Q9BUA6 226 aa15.78■□□□□ 0.12
VPS18-203ENST00000558855 AMNQ9BXJ7 453 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms