RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 ZMIZ1Q9ULJ6 1067 aa11.67□□□□□ -0.54
SPG11-212ENST00000558790 LRRC37A2A6NM11 1700 aa11.66□□□□□ -0.54
SPG11-212ENST00000558790 ZNF532Q9HCE3 1301 aa11.66□□□□□ -0.54
SPG11-212ENST00000558790 TCRBV5S4A2TA0A5A2 114 aa11.66□□□□□ -0.54
SPG11-212ENST00000558790 ST8SIA5O15466 376 aa11.66□□□□□ -0.54
SPG11-212ENST00000558790 SEPT4O43236 478 aa11.66□□□□□ -0.54
SPG11-212ENST00000558790 BMP1P13497 986 aa11.66□□□□□ -0.54
SPG11-212ENST00000558790 DPYDQ12882 1025 aa11.66□□□□□ -0.54
SPG11-212ENST00000558790 PLS1Q14651 629 aa11.66□□□□□ -0.54
SPG11-212ENST00000558790 FAM47AQ5JRC9 791 aa11.66□□□□□ -0.54
SPG11-212ENST00000558790 SLC9C2Q5TAH2 1124 aa11.66□□□□□ -0.54
SPG11-212ENST00000558790 SLC39A5Q6ZMH5 540 aa11.66□□□□□ -0.54
SPG11-212ENST00000558790 ERC1Q8IUD2 1116 aa11.66□□□□□ -0.54
SPG11-212ENST00000558790 SPICE1Q8N0Z3 855 aa11.66□□□□□ -0.54
SPG11-212ENST00000558790 LCORLQ8N3X6 602 aa11.66□□□□□ -0.54
SPG11-212ENST00000558790 SHCBP1Q8NEM2 672 aa11.66□□□□□ -0.54
SPG11-212ENST00000558790 ATG4CQ96DT6 458 aa11.66□□□□□ -0.54
SPG11-212ENST00000558790 ASB2Q96Q27 587 aa11.66□□□□□ -0.54
SPG11-212ENST00000558790 EPHX3Q9H6B9 360 aa11.66□□□□□ -0.54
SPG11-212ENST00000558790 IL1RAPL2Q9NP60 686 aa11.66□□□□□ -0.54
SPG11-212ENST00000558790 DCP1AQ9NPI6 582 aaPredicted RBP11.66□□□□□ -0.54
SPG11-212ENST00000558790 PDLIM7Q9NR12 457 aa11.66□□□□□ -0.54
SPG11-212ENST00000558790 NOVA2Q9UNW9 492 aaKnown RBP11.66□□□□□ -0.54
SPG11-212ENST00000558790 ROBO3Q96MS0 1386 aa11.66□□□□□ -0.54
SPG11-212ENST00000558790 STRNO43815 780 aa11.65□□□□□ -0.54
SPG11-212ENST00000558790 FLOT1O75955 427 aa11.65□□□□□ -0.54
SPG11-212ENST00000558790 ICA1Q05084 483 aa11.65□□□□□ -0.54
SPG11-212ENST00000558790 LAPTM4AQ15012 233 aa11.65□□□□□ -0.54
SPG11-212ENST00000558790 TTF1Q15361 905 aaPredicted RBP11.65□□□□□ -0.54
SPG11-212ENST00000558790 PRAMEF19Q5SWL8 479 aa11.65□□□□□ -0.54
SPG11-212ENST00000558790 TMEM179Q6ZVK1 233 aa11.65□□□□□ -0.54
SPG11-212ENST00000558790 NCAPG2Q86XI2 1143 aa11.65□□□□□ -0.54
SPG11-212ENST00000558790 MB21D1Q8N884 522 aa11.65□□□□□ -0.54
SPG11-212ENST00000558790 ARRDC4Q8NCT1 418 aa11.65□□□□□ -0.54
SPG11-212ENST00000558790 STK32AQ8WU08 396 aa11.65□□□□□ -0.54
SPG11-212ENST00000558790 BADQ92934 168 aa11.65□□□□□ -0.54
SPG11-212ENST00000558790 FERMT2Q96AC1 680 aa11.65□□□□□ -0.54
SPG11-212ENST00000558790 MAML3Q96JK9 1138 aa11.65□□□□□ -0.54
SPG11-212ENST00000558790 ZNF395Q9H8N7 513 aaPredicted RBP11.65□□□□□ -0.54
SPG11-212ENST00000558790 ETNK1Q9HBU6 452 aa11.65□□□□□ -0.54
SPG11-212ENST00000558790 HOXC10Q9NYD6 342 aa11.65□□□□□ -0.54
SPG11-212ENST00000558790 CARNS1A5YM72 827 aa11.64□□□□□ -0.55
SPG11-212ENST00000558790 TRIM43BA6NCK2 446 aa11.64□□□□□ -0.55
SPG11-212ENST00000558790 SFI1A8K8P3 1242 aa11.64□□□□□ -0.55
SPG11-212ENST00000558790 SMIM22K7EJ46 135 aa11.64□□□□□ -0.55
SPG11-212ENST00000558790 GOLIM4O00461 696 aa11.64□□□□□ -0.55
SPG11-212ENST00000558790 DKK1O94907 266 aa11.64□□□□□ -0.55
SPG11-212ENST00000558790 AKR1B1P15121 316 aa11.64□□□□□ -0.55
SPG11-212ENST00000558790 ADCYAP1R1P41586 468 aa11.64□□□□□ -0.55
SPG11-212ENST00000558790 SMAD3P84022 425 aaKnown RBP11.64□□□□□ -0.55
SPG11-212ENST00000558790 LRRC41Q15345 812 aa11.64□□□□□ -0.55
SPG11-212ENST00000558790 ANKMY2Q8IV38 441 aa11.64□□□□□ -0.55
SPG11-212ENST00000558790 ABRAQ8N0Z2 381 aa11.64□□□□□ -0.55
SPG11-212ENST00000558790 RETREG2Q8NC44 543 aa11.64□□□□□ -0.55
SPG11-212ENST00000558790 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.64□□□□□ -0.55
SPG11-212ENST00000558790 TRIM43Q96BQ3 446 aaPredicted RBP11.64□□□□□ -0.55
SPG11-212ENST00000558790 DYNLL2Q96FJ2 89 aa11.64□□□□□ -0.55
SPG11-212ENST00000558790 DNAJC2Q99543 621 aaKnown RBP11.64□□□□□ -0.55
SPG11-212ENST00000558790 MROH8Q9H579 483 aa11.64□□□□□ -0.55
SPG11-212ENST00000558790 ARMT1Q9H993 441 aa11.64□□□□□ -0.55
SPG11-212ENST00000558790 SWAP70Q9UH65 585 aa11.64□□□□□ -0.55
SPG11-212ENST00000558790 TRIOO75962 3097 aa11.64□□□□□ -0.55
SPG11-212ENST00000558790 LCTP09848 1927 aa11.63□□□□□ -0.55
SPG11-212ENST00000558790 TMEM229AB2RXF0 380 aa11.63□□□□□ -0.55
SPG11-212ENST00000558790 AXIN1O15169 862 aa11.63□□□□□ -0.55
SPG11-212ENST00000558790 PTGIRP43119 386 aa11.63□□□□□ -0.55
SPG11-212ENST00000558790 GDF10P55107 478 aa11.63□□□□□ -0.55
SPG11-212ENST00000558790 TMEM132BQ14DG7 1078 aa11.63□□□□□ -0.55
SPG11-212ENST00000558790 SIAH1Q8IUQ4 282 aa11.63□□□□□ -0.55
SPG11-212ENST00000558790 RHPN1Q8TCX5 695 aa11.63□□□□□ -0.55
SPG11-212ENST00000558790 LENG1Q96BZ8 264 aaPredicted RBP11.63□□□□□ -0.55
SPG11-212ENST00000558790 VCPKMTQ9H867 229 aa11.63□□□□□ -0.55
SPG11-212ENST00000558790 SLC5A4Q9NY91 659 aa11.63□□□□□ -0.55
SPG11-212ENST00000558790 TMX2Q9Y320 296 aa11.63□□□□□ -0.55
SPG11-212ENST00000558790 HCN4Q9Y3Q4 1203 aa11.63□□□□□ -0.55
SPG11-212ENST00000558790 CYP2D7A0A087X1C5 515 aa11.62□□□□□ -0.55
SPG11-212ENST00000558790 WDR46O15213 610 aaKnown RBP11.62□□□□□ -0.55
SPG11-212ENST00000558790 PRKAB2O43741 272 aa11.62□□□□□ -0.55
SPG11-212ENST00000558790 MBD4O95243 580 aa11.62□□□□□ -0.55
SPG11-212ENST00000558790 PGK2P07205 417 aa11.62□□□□□ -0.55
SPG11-212ENST00000558790 FCER1AP12319 257 aa11.62□□□□□ -0.55
SPG11-212ENST00000558790 ITGB8P26012 769 aa11.62□□□□□ -0.55
SPG11-212ENST00000558790 C6orf118Q5T5N4 469 aa11.62□□□□□ -0.55
SPG11-212ENST00000558790 C1orf53Q5VUE5 145 aa11.62□□□□□ -0.55
SPG11-212ENST00000558790 SIX5Q8N196 739 aa11.62□□□□□ -0.55
SPG11-212ENST00000558790 LINC00528Q8N1L1 170 aa11.62□□□□□ -0.55
SPG11-212ENST00000558790 PANK1Q8TE04 598 aa11.62□□□□□ -0.55
SPG11-212ENST00000558790 ATXN2LQ8WWM7 1075 aaKnown RBP11.62□□□□□ -0.55
SPG11-212ENST00000558790 C1QTNF1Q9BXJ1 281 aa11.62□□□□□ -0.55
SPG11-212ENST00000558790 SH2D4AQ9H788 454 aa11.62□□□□□ -0.55
SPG11-212ENST00000558790 C11orf16Q9NQ32 467 aa11.62□□□□□ -0.55
SPG11-212ENST00000558790 XPNPEP3Q9NQH7 507 aa11.62□□□□□ -0.55
SPG11-212ENST00000558790 FBXO28Q9NVF7 368 aa11.62□□□□□ -0.55
SPG11-212ENST00000558790 THEGQ9P2T0 379 aa11.62□□□□□ -0.55
SPG11-212ENST00000558790 SERTAD1Q9UHV2 236 aa11.62□□□□□ -0.55
SPG11-212ENST00000558790 PHF24Q9UPV7 400 aa11.62□□□□□ -0.55
SPG11-212ENST00000558790 A0A1W2PQ45 241 aaPredicted RBP11.61□□□□□ -0.55
SPG11-212ENST00000558790 A0A1W2PQY0 241 aa11.61□□□□□ -0.55
SPG11-212ENST00000558790 A0A1W2PRU2 124 aa11.61□□□□□ -0.55
SPG11-212ENST00000558790 FAM86C2PA6NEL3 165 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms