RNA–Protein interactions for RNA: ENST00000558709.1

SCG3-203, Transcript of secretogranin III, humanhuman

TSL 2

Gene SCG3, Length 896 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-203ENST00000558709 FOXO4P98177 505 aa9.74□□□□□ -0.85
SCG3-203ENST00000558709 DCAF15Q66K64 600 aa9.74□□□□□ -0.85
SCG3-203ENST00000558709 MIGA2Q7L4E1 593 aa9.74□□□□□ -0.85
SCG3-203ENST00000558709 NECAB2Q7Z6G3 386 aa9.74□□□□□ -0.85
SCG3-203ENST00000558709 DMRTC2Q8IXT2 367 aaPredicted RBP9.74□□□□□ -0.85
SCG3-203ENST00000558709 TDHQ8IZJ6 230 aa9.74□□□□□ -0.85
SCG3-203ENST00000558709 FMR1NBQ8N0W7 255 aaPredicted RBP9.74□□□□□ -0.85
SCG3-203ENST00000558709 DTWD1Q8N5C7 304 aa9.74□□□□□ -0.85
SCG3-203ENST00000558709 HOOK2Q96ED9 719 aa9.74□□□□□ -0.85
SCG3-203ENST00000558709 PARK7Q99497 189 aaKnown RBP9.74□□□□□ -0.85
SCG3-203ENST00000558709 STK31Q9BXU1 1019 aa9.74□□□□□ -0.85
SCG3-203ENST00000558709 ZNF341Q9BYN7 854 aa9.74□□□□□ -0.85
SCG3-203ENST00000558709 MYH16Q9H6N6 1097 aa9.74□□□□□ -0.85
SCG3-203ENST00000558709 CDK5RAP2Q96SN8 1893 aa9.74□□□□□ -0.85
SCG3-203ENST00000558709 NCOR1O75376 2440 aa9.74□□□□□ -0.85
SCG3-203ENST00000558709 COL2A1P02458 1487 aaPredicted RBP9.73□□□□□ -0.85
SCG3-203ENST00000558709 H3BRB1 525 aa9.73□□□□□ -0.85
SCG3-203ENST00000558709 RALBP1Q15311 655 aa9.73□□□□□ -0.85
SCG3-203ENST00000558709 FAM83AQ86UY5 434 aa9.73□□□□□ -0.85
SCG3-203ENST00000558709 CEP120Q8N960 986 aa9.73□□□□□ -0.85
SCG3-203ENST00000558709 C1orf127Q8N9H9 656 aa9.73□□□□□ -0.85
SCG3-203ENST00000558709 TEKT1Q969V4 418 aa9.73□□□□□ -0.85
SCG3-203ENST00000558709 FAM84BQ96KN1 310 aaPredicted RBP9.73□□□□□ -0.85
SCG3-203ENST00000558709 TUT1Q9H6E5 874 aaKnown RBP9.73□□□□□ -0.85
SCG3-203ENST00000558709 CNNM1Q9NRU3 951 aa9.73□□□□□ -0.85
SCG3-203ENST00000558709 TMOD2Q9NZR1 351 aa9.73□□□□□ -0.85
SCG3-203ENST00000558709 SALL4Q9UJQ4 1053 aa9.73□□□□□ -0.85
SCG3-203ENST00000558709 RLFQ13129 1914 aa9.73□□□□□ -0.85
SCG3-203ENST00000558709 MYBBP1AQ9BQG0 1328 aaKnown RBP9.73□□□□□ -0.85
SCG3-203ENST00000558709 TNPO2O14787 897 aaKnown RBP9.72□□□□□ -0.85
SCG3-203ENST00000558709 SELPP16109 830 aa9.72□□□□□ -0.85
SCG3-203ENST00000558709 CAPN2P17655 700 aa9.72□□□□□ -0.85
SCG3-203ENST00000558709 HIBADHP31937 336 aaKnown RBP9.72□□□□□ -0.85
SCG3-203ENST00000558709 USP5P45974 858 aa9.72□□□□□ -0.85
SCG3-203ENST00000558709 ATP11AP98196 1134 aa9.72□□□□□ -0.85
SCG3-203ENST00000558709 CALD1Q05682 793 aaKnown RBP9.72□□□□□ -0.85
SCG3-203ENST00000558709 CHAF1AQ13111 956 aaPredicted RBP9.72□□□□□ -0.85
SCG3-203ENST00000558709 ADAMTSL4Q6UY14 1074 aa9.72□□□□□ -0.85
SCG3-203ENST00000558709 LDHAL6AQ6ZMR3 332 aa9.72□□□□□ -0.85
SCG3-203ENST00000558709 LINS1Q8NG48 757 aa9.72□□□□□ -0.85
SCG3-203ENST00000558709 DNAAF4Q8WXU2 420 aa9.72□□□□□ -0.85
SCG3-203ENST00000558709 TSR2Q969E8 191 aaKnown RBP9.72□□□□□ -0.85
SCG3-203ENST00000558709 GUCD1Q96NT3 240 aa9.72□□□□□ -0.85
SCG3-203ENST00000558709 CHMP4AQ9BY43 222 aa9.72□□□□□ -0.85
SCG3-203ENST00000558709 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.72□□□□□ -0.85
SCG3-203ENST00000558709 GNEQ9Y223 722 aaKnown RBP9.72□□□□□ -0.85
SCG3-203ENST00000558709 RPTORQ8N122 1335 aa9.72□□□□□ -0.85
SCG3-203ENST00000558709 APAF1O14727 1248 aa9.71□□□□□ -0.86
SCG3-203ENST00000558709 RAC1P63000 192 aa9.71□□□□□ -0.86
SCG3-203ENST00000558709 HDLBPQ00341 1268 aaKnown RBP9.71□□□□□ -0.86
SCG3-203ENST00000558709 UBE4AQ14139 1066 aa9.71□□□□□ -0.86
SCG3-203ENST00000558709 GRIK4Q16099 956 aa9.71□□□□□ -0.86
SCG3-203ENST00000558709 C8orf34Q49A92 452 aa9.71□□□□□ -0.86
SCG3-203ENST00000558709 TAF7LQ5H9L4 462 aa9.71□□□□□ -0.86
SCG3-203ENST00000558709 EPHA10Q5JZY3 1008 aa9.71□□□□□ -0.86
SCG3-203ENST00000558709 NOL9Q5SY16 702 aaKnown RBP9.71□□□□□ -0.86
SCG3-203ENST00000558709 FKBP1CQ5VVH2 108 aa9.71□□□□□ -0.86
SCG3-203ENST00000558709 LMBR1LQ6UX01 489 aa9.71□□□□□ -0.86
SCG3-203ENST00000558709 WFDC8Q8IUA0 241 aa9.71□□□□□ -0.86
SCG3-203ENST00000558709 ZDHHC15Q96MV8 337 aa9.71□□□□□ -0.86
SCG3-203ENST00000558709 RBSNQ9H1K0 784 aa9.71□□□□□ -0.86
SCG3-203ENST00000558709 TRIM33Q9UPN9 1127 aa9.71□□□□□ -0.86
SCG3-203ENST00000558709 DEAF1O75398 565 aaPredicted RBP9.7□□□□□ -0.86
SCG3-203ENST00000558709 TNFRSF21O75509 655 aa9.7□□□□□ -0.86
SCG3-203ENST00000558709 EHHADHQ08426 723 aa9.7□□□□□ -0.86
SCG3-203ENST00000558709 CCDC57Q2TAC2 916 aa9.7□□□□□ -0.86
SCG3-203ENST00000558709 APOBEC3HQ6NTF7 200 aaKnown RBP9.7□□□□□ -0.86
SCG3-203ENST00000558709 FBXO11Q86XK2 927 aa9.7□□□□□ -0.86
SCG3-203ENST00000558709 GLYCTKQ8IVS8 523 aa9.7□□□□□ -0.86
SCG3-203ENST00000558709 KANSL3Q9P2N6 904 aa9.7□□□□□ -0.86
SCG3-203ENST00000558709 ZNF112Q9UJU3 913 aa9.7□□□□□ -0.86
SCG3-203ENST00000558709 A0A0G2JLL6 359 aaPredicted RBP9.69□□□□□ -0.86
SCG3-203ENST00000558709 PFASO15067 1338 aa9.69□□□□□ -0.86
SCG3-203ENST00000558709 BRD1O95696 1058 aa9.69□□□□□ -0.86
SCG3-203ENST00000558709 TCP10Q12799 353 aa9.69□□□□□ -0.86
SCG3-203ENST00000558709 TWISTNBQ3B726 338 aaPredicted RBP9.69□□□□□ -0.86
SCG3-203ENST00000558709 GADL1Q6ZQY3 521 aa9.69□□□□□ -0.86
SCG3-203ENST00000558709 PRRT2Q7Z6L0 340 aaPredicted RBP9.69□□□□□ -0.86
SCG3-203ENST00000558709 CACTIN-AS1Q8N1I8 211 aa9.69□□□□□ -0.86
SCG3-203ENST00000558709 TBC1D22AQ8WUA7 517 aa9.69□□□□□ -0.86
SCG3-203ENST00000558709 FAM151AQ8WW52 585 aa9.69□□□□□ -0.86
SCG3-203ENST00000558709 FAM161BQ96MY7 647 aa9.69□□□□□ -0.86
SCG3-203ENST00000558709 PUS3Q9BZE2 481 aaKnown RBP9.69□□□□□ -0.86
SCG3-203ENST00000558709 RASSF4Q9H2L5 321 aa9.69□□□□□ -0.86
SCG3-203ENST00000558709 C11orf49Q9H6J7 331 aa9.69□□□□□ -0.86
SCG3-203ENST00000558709 SIPA1L1O43166 1804 aa9.68□□□□□ -0.86
SCG3-203ENST00000558709 FOCADQ5VW36 1801 aa9.68□□□□□ -0.86
SCG3-203ENST00000558709 MAST3O60307 1309 aa9.68□□□□□ -0.86
SCG3-203ENST00000558709 CXCL11O14625 94 aa9.68□□□□□ -0.86
SCG3-203ENST00000558709 FRAT2O75474 233 aaPredicted RBP9.68□□□□□ -0.86
SCG3-203ENST00000558709 HMGCRP04035 888 aa9.68□□□□□ -0.86
SCG3-203ENST00000558709 FBXO33Q7Z6M2 555 aa9.68□□□□□ -0.86
SCG3-203ENST00000558709 VPS37DQ86XT2 251 aa9.68□□□□□ -0.86
SCG3-203ENST00000558709 SNX29Q8TEQ0 813 aa9.68□□□□□ -0.86
SCG3-203ENST00000558709 SMCR8Q8TEV9 937 aaPredicted RBP9.68□□□□□ -0.86
SCG3-203ENST00000558709 COA7Q96BR5 231 aa9.68□□□□□ -0.86
SCG3-203ENST00000558709 LENG1Q96BZ8 264 aaPredicted RBP9.68□□□□□ -0.86
SCG3-203ENST00000558709 NACC1Q96RE7 527 aa9.68□□□□□ -0.86
SCG3-203ENST00000558709 PBX4Q9BYU1 374 aa9.68□□□□□ -0.86
SCG3-203ENST00000558709 FOXD3Q9UJU5 478 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms