RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 STX8Q9UNK0 236 aa13.09□□□□□ -0.31
RABGGTA-204ENST00000558376 BRWD1Q9NSI6 2320 aa13.09□□□□□ -0.31
RABGGTA-204ENST00000558376 SLC16A2P36021 539 aa13.08□□□□□ -0.32
RABGGTA-204ENST00000558376 NOVP48745 357 aa13.08□□□□□ -0.32
RABGGTA-204ENST00000558376 DEFB128Q7Z7B8 93 aa13.08□□□□□ -0.32
RABGGTA-204ENST00000558376 MAP4K1Q92918 833 aa13.08□□□□□ -0.32
RABGGTA-204ENST00000558376 WDR11Q9BZH6 1224 aa13.08□□□□□ -0.32
RABGGTA-204ENST00000558376 TNKSO95271 1327 aa13.08□□□□□ -0.32
RABGGTA-204ENST00000558376 CCDC171Q6TFL3 1326 aa13.08□□□□□ -0.32
RABGGTA-204ENST00000558376 RAD50Q92878 1312 aa13.08□□□□□ -0.32
RABGGTA-204ENST00000558376 RBM47A0AV96 593 aaKnown RBP13.08□□□□□ -0.32
RABGGTA-204ENST00000558376 EPOPA6NHQ4 379 aa13.08□□□□□ -0.32
RABGGTA-204ENST00000558376 TSPY2A6NKD2 308 aa13.08□□□□□ -0.32
RABGGTA-204ENST00000558376 ICAM1P05362 532 aa13.08□□□□□ -0.32
RABGGTA-204ENST00000558376 ALDH5A1P51649 535 aaPredicted RBP13.08□□□□□ -0.32
RABGGTA-204ENST00000558376 PURAQ00577 322 aaKnown RBP13.08□□□□□ -0.32
RABGGTA-204ENST00000558376 RANBP17Q9H2T7 1088 aaKnown RBP13.08□□□□□ -0.32
RABGGTA-204ENST00000558376 DAXXQ9UER7 740 aaPredicted RBP13.08□□□□□ -0.32
RABGGTA-204ENST00000558376 TAF6LQ9Y6J9 622 aa13.08□□□□□ -0.32
RABGGTA-204ENST00000558376 NFIBO00712 420 aa13.07□□□□□ -0.32
RABGGTA-204ENST00000558376 ARHGEF15O94989 841 aa13.07□□□□□ -0.32
RABGGTA-204ENST00000558376 MYL3P08590 195 aa13.07□□□□□ -0.32
RABGGTA-204ENST00000558376 KCNQ1P51787 676 aa13.07□□□□□ -0.32
RABGGTA-204ENST00000558376 COL9A3Q14050 684 aaPredicted RBP13.07□□□□□ -0.32
RABGGTA-204ENST00000558376 CCDC96Q2M329 555 aa13.07□□□□□ -0.32
RABGGTA-204ENST00000558376 LRRFIP1Q32MZ4 808 aaKnown RBP13.07□□□□□ -0.32
RABGGTA-204ENST00000558376 IL27Q8NEV9 243 aa13.07□□□□□ -0.32
RABGGTA-204ENST00000558376 CERS4Q9HA82 394 aa13.07□□□□□ -0.32
RABGGTA-204ENST00000558376 HELLSQ9NRZ9 838 aa13.07□□□□□ -0.32
RABGGTA-204ENST00000558376 POLR3EQ9NVU0 708 aa13.07□□□□□ -0.32
RABGGTA-204ENST00000558376 RBM8AQ9Y5S9 174 aaKnown RBP13.07□□□□□ -0.32
RABGGTA-204ENST00000558376 MTCH2Q9Y6C9 303 aa13.07□□□□□ -0.32
RABGGTA-204ENST00000558376 CA3P07451 260 aa13.06□□□□□ -0.32
RABGGTA-204ENST00000558376 SUPT20HL2P0C7V6 817 aa13.06□□□□□ -0.32
RABGGTA-204ENST00000558376 CPA1P15085 419 aa13.06□□□□□ -0.32
RABGGTA-204ENST00000558376 POU3F3P20264 500 aaPredicted RBP13.06□□□□□ -0.32
RABGGTA-204ENST00000558376 NECTIN1Q15223 517 aa13.06□□□□□ -0.32
RABGGTA-204ENST00000558376 NBPF20Q3BBV1 942 aa13.06□□□□□ -0.32
RABGGTA-204ENST00000558376 TMEM67Q5HYA8 995 aa13.06□□□□□ -0.32
RABGGTA-204ENST00000558376 PPP4R3BQ5MIZ7 849 aa13.06□□□□□ -0.32
RABGGTA-204ENST00000558376 KRT40Q6A162 431 aa13.06□□□□□ -0.32
RABGGTA-204ENST00000558376 BTNL9Q6UXG8 535 aa13.06□□□□□ -0.32
RABGGTA-204ENST00000558376 CLEC4DQ8WXI8 215 aa13.06□□□□□ -0.32
RABGGTA-204ENST00000558376 MTG1Q9BT17 334 aaPredicted RBP13.06□□□□□ -0.32
RABGGTA-204ENST00000558376 ANP32EQ9BTT0 268 aa13.06□□□□□ -0.32
RABGGTA-204ENST00000558376 TSPYL2Q9H2G4 693 aaPredicted RBP13.06□□□□□ -0.32
RABGGTA-204ENST00000558376 SNX14Q9Y5W7 946 aa13.06□□□□□ -0.32
RABGGTA-204ENST00000558376 PTPRSQ13332 1948 aa13.06□□□□□ -0.32
RABGGTA-204ENST00000558376 RANBP6O60518 1105 aaKnown RBP13.06□□□□□ -0.32
RABGGTA-204ENST00000558376 PFKMP08237 780 aa13.06□□□□□ -0.32
RABGGTA-204ENST00000558376 NEK4P51957 841 aa13.06□□□□□ -0.32
RABGGTA-204ENST00000558376 ADCK5Q3MIX3 580 aa13.06□□□□□ -0.32
RABGGTA-204ENST00000558376 SYDE2Q5VT97 1194 aa13.06□□□□□ -0.32
RABGGTA-204ENST00000558376 SLC30A10Q6XR72 485 aa13.06□□□□□ -0.32
RABGGTA-204ENST00000558376 OR6J1Q8NGC5 347 aa13.06□□□□□ -0.32
RABGGTA-204ENST00000558376 DCAF4Q8WV16 495 aa13.06□□□□□ -0.32
RABGGTA-204ENST00000558376 COPS5Q92905 334 aa13.06□□□□□ -0.32
RABGGTA-204ENST00000558376 UPF3BQ9BZI7 483 aaKnown RBP13.06□□□□□ -0.32
RABGGTA-204ENST00000558376 GPCPD1Q9NPB8 672 aa13.06□□□□□ -0.32
RABGGTA-204ENST00000558376 ADD3Q9UEY8 706 aaKnown RBP13.06□□□□□ -0.32
RABGGTA-204ENST00000558376 ANAPC4Q9UJX5 808 aa13.06□□□□□ -0.32
RABGGTA-204ENST00000558376 CREB3L3Q68CJ9 461 aa13.05□□□□□ -0.32
RABGGTA-204ENST00000558376 FRMPD2Q68DX3 1309 aaPredicted RBP13.05□□□□□ -0.32
RABGGTA-204ENST00000558376 XIRP2A4UGR9 3374 aa13.04□□□□□ -0.32
RABGGTA-204ENST00000558376 PTPDC1A2A3K4 754 aa13.04□□□□□ -0.32
RABGGTA-204ENST00000558376 ORC4O43929 436 aa13.04□□□□□ -0.32
RABGGTA-204ENST00000558376 FGRP09769 529 aa13.04□□□□□ -0.32
RABGGTA-204ENST00000558376 IQCF3P0C7M6 154 aa13.04□□□□□ -0.32
RABGGTA-204ENST00000558376 HSPD1P10809 573 aaKnown RBP13.04□□□□□ -0.32
RABGGTA-204ENST00000558376 CALML3P27482 149 aa13.04□□□□□ -0.32
RABGGTA-204ENST00000558376 BECN1Q14457 450 aa13.04□□□□□ -0.32
RABGGTA-204ENST00000558376 RABEP1Q15276 862 aa13.04□□□□□ -0.32
RABGGTA-204ENST00000558376 SKIV2LQ15477 1246 aaKnown RBP13.04□□□□□ -0.32
RABGGTA-204ENST00000558376 FAM47CQ5HY64 1035 aa13.04□□□□□ -0.32
RABGGTA-204ENST00000558376 TMEM47Q9BQJ4 181 aa13.04□□□□□ -0.32
RABGGTA-204ENST00000558376 TANC1Q9C0D5 1861 aa13.04□□□□□ -0.32
RABGGTA-204ENST00000558376 LOC102724159A0A0B4J2E5 919 aa13.04□□□□□ -0.32
RABGGTA-204ENST00000558376 RBAK-RBAKDNI3L0D1 243 aa13.04□□□□□ -0.32
RABGGTA-204ENST00000558376 SLC27A2O14975 620 aa13.04□□□□□ -0.32
RABGGTA-204ENST00000558376 CPT1AP50416 773 aa13.04□□□□□ -0.32
RABGGTA-204ENST00000558376 TAP1Q03518 808 aa13.04□□□□□ -0.32
RABGGTA-204ENST00000558376 PWP2Q15269 919 aaKnown RBP13.04□□□□□ -0.32
RABGGTA-204ENST00000558376 SPRED2Q7Z698 418 aa13.04□□□□□ -0.32
RABGGTA-204ENST00000558376 LARP6Q9BRS8 491 aaKnown RBP13.04□□□□□ -0.32
RABGGTA-204ENST00000558376 GPHNQ9NQX3 736 aaPredicted RBP13.04□□□□□ -0.32
RABGGTA-204ENST00000558376 TOP1P11387 765 aaKnown RBP13.03□□□□□ -0.32
RABGGTA-204ENST00000558376 ACTN1P12814 892 aa13.03□□□□□ -0.32
RABGGTA-204ENST00000558376 EDNRBP24530 442 aa13.03□□□□□ -0.32
RABGGTA-204ENST00000558376 NFRKBQ6P4R8 1299 aa13.03□□□□□ -0.32
RABGGTA-204ENST00000558376 HERC6Q8IVU3 1022 aa13.03□□□□□ -0.32
RABGGTA-204ENST00000558376 PHOSPHO2Q8TCD6 241 aa13.03□□□□□ -0.32
RABGGTA-204ENST00000558376 ARNTL2Q8WYA1 636 aa13.03□□□□□ -0.32
RABGGTA-204ENST00000558376 SNX21Q969T3 373 aa13.03□□□□□ -0.32
RABGGTA-204ENST00000558376 A6NJR5 290 aa13.02□□□□□ -0.32
RABGGTA-204ENST00000558376 EPB41L2O43491 1005 aaKnown RBP13.02□□□□□ -0.32
RABGGTA-204ENST00000558376 GTPBP6O43824 516 aaPredicted RBP13.02□□□□□ -0.32
RABGGTA-204ENST00000558376 TLL1O43897 1013 aa13.02□□□□□ -0.32
RABGGTA-204ENST00000558376 RFC2P35250 354 aa13.02□□□□□ -0.32
RABGGTA-204ENST00000558376 PLA2G5P39877 138 aa13.02□□□□□ -0.32
RABGGTA-204ENST00000558376 ANAPC15P60006 121 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms