RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 TPCN1Q9ULQ1 816 aa8.3□□□□□ -1.08
MARK3-212ENST00000558223 ZBTB1Q9Y2K1 713 aa8.3□□□□□ -1.08
MARK3-212ENST00000558223 ZMYM6O95789 1325 aa8.29□□□□□ -1.08
MARK3-212ENST00000558223 GOLGA6CA6NDK9 693 aa8.29□□□□□ -1.08
MARK3-212ENST00000558223 GOLGA6BA6NDN3 693 aa8.29□□□□□ -1.08
MARK3-212ENST00000558223 GOLGA6L4A6NEF3 574 aa8.29□□□□□ -1.08
MARK3-212ENST00000558223 ZNF213O14771 459 aa8.29□□□□□ -1.08
MARK3-212ENST00000558223 LILRA1O75019 489 aa8.29□□□□□ -1.08
MARK3-212ENST00000558223 KATNA1O75449 491 aa8.29□□□□□ -1.08
MARK3-212ENST00000558223 GOLGA6DP0CG33 693 aa8.29□□□□□ -1.08
MARK3-212ENST00000558223 MCM5P33992 734 aa8.29□□□□□ -1.08
MARK3-212ENST00000558223 IDH3AP50213 366 aa8.29□□□□□ -1.08
MARK3-212ENST00000558223 MAP3K12Q12852 859 aa8.29□□□□□ -1.08
MARK3-212ENST00000558223 RAPGEF1Q13905 1077 aa8.29□□□□□ -1.08
MARK3-212ENST00000558223 TOB2Q14106 344 aaPredicted RBP8.29□□□□□ -1.08
MARK3-212ENST00000558223 KIAA0319Q5VV43 1072 aa8.29□□□□□ -1.08
MARK3-212ENST00000558223 CPLX2Q6PUV4 134 aaKnown RBP8.29□□□□□ -1.08
MARK3-212ENST00000558223 Q6ZUG5 572 aa8.29□□□□□ -1.08
MARK3-212ENST00000558223 GLIS3Q8NEA6 775 aa8.29□□□□□ -1.08
MARK3-212ENST00000558223 SVIPQ8NHG7 77 aa8.29□□□□□ -1.08
MARK3-212ENST00000558223 NCOA7Q8NI08 942 aa8.29□□□□□ -1.08
MARK3-212ENST00000558223 GPT2Q8TD30 523 aa8.29□□□□□ -1.08
MARK3-212ENST00000558223 ZNF669Q96BR6 464 aaPredicted RBP8.29□□□□□ -1.08
MARK3-212ENST00000558223 NIFKQ9BYG3 293 aaKnown RBP8.29□□□□□ -1.08
MARK3-212ENST00000558223 NYXQ9GZU5 481 aa8.29□□□□□ -1.08
MARK3-212ENST00000558223 TSPY26PQ9H489 355 aa8.29□□□□□ -1.08
MARK3-212ENST00000558223 GOLGA6AQ9NYA3 693 aa8.29□□□□□ -1.08
MARK3-212ENST00000558223 ANAPC4Q9UJX5 808 aa8.29□□□□□ -1.08
MARK3-212ENST00000558223 INTUQ9ULD6 942 aa8.29□□□□□ -1.08
MARK3-212ENST00000558223 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.29□□□□□ -1.08
MARK3-212ENST00000558223 RPS6KL1Q9Y6S9 549 aa8.29□□□□□ -1.08
MARK3-212ENST00000558223 ROBO1Q9Y6N7 1651 aa8.29□□□□□ -1.08
MARK3-212ENST00000558223 H3BQV1 296 aa8.28□□□□□ -1.08
MARK3-212ENST00000558223 CDKL5O76039 1030 aa8.28□□□□□ -1.08
MARK3-212ENST00000558223 BMP1P13497 986 aa8.28□□□□□ -1.08
MARK3-212ENST00000558223 LMNB1P20700 586 aa8.28□□□□□ -1.08
MARK3-212ENST00000558223 CRKLP46109 303 aaKnown RBP8.28□□□□□ -1.08
MARK3-212ENST00000558223 ARSDP51689 593 aa8.28□□□□□ -1.08
MARK3-212ENST00000558223 PABPC4Q13310 644 aaKnown RBP eCLIP8.28□□□□□ -1.08
MARK3-212ENST00000558223 HLFQ16534 295 aa8.28□□□□□ -1.08
MARK3-212ENST00000558223 INTS5Q6P9B9 1019 aaKnown RBP8.28□□□□□ -1.08
MARK3-212ENST00000558223 TPTE2Q6XPS3 522 aa8.28□□□□□ -1.08
MARK3-212ENST00000558223 RALYLQ86SE5 291 aaKnown RBP8.28□□□□□ -1.08
MARK3-212ENST00000558223 VGLL2Q8N8G2 317 aa8.28□□□□□ -1.08
MARK3-212ENST00000558223 SMARCC2Q8TAQ2 1214 aa8.28□□□□□ -1.08
MARK3-212ENST00000558223 KIFC2Q96AC6 838 aa8.28□□□□□ -1.08
MARK3-212ENST00000558223 ZNF396Q96N95 335 aaPredicted RBP8.28□□□□□ -1.08
MARK3-212ENST00000558223 PUS3Q9BZE2 481 aaKnown RBP8.28□□□□□ -1.08
MARK3-212ENST00000558223 ASPSCR1Q9BZE9 553 aa8.28□□□□□ -1.08
MARK3-212ENST00000558223 NACAP1Q9BZK3 213 aa8.28□□□□□ -1.08
MARK3-212ENST00000558223 GREM2Q9H772 168 aa8.28□□□□□ -1.08
MARK3-212ENST00000558223 CNNM2Q9H8M5 875 aa8.28□□□□□ -1.08
MARK3-212ENST00000558223 USP20Q9Y2K6 914 aa8.28□□□□□ -1.08
MARK3-212ENST00000558223 LTBP4Q8N2S1 1624 aa8.28□□□□□ -1.08
MARK3-212ENST00000558223 CICQ96RK0 1608 aaPredicted RBP8.28□□□□□ -1.08
MARK3-212ENST00000558223 SLIT2O94813 1529 aa8.28□□□□□ -1.08
MARK3-212ENST00000558223 ATRNO75882 1429 aa8.28□□□□□ -1.08
MARK3-212ENST00000558223 MAST3O60307 1309 aa8.28□□□□□ -1.08
MARK3-212ENST00000558223 SPATA31A6Q5VVP1 1343 aa8.28□□□□□ -1.08
MARK3-212ENST00000558223 CNTNAP4Q9C0A0 1308 aa8.28□□□□□ -1.08
MARK3-212ENST00000558223 NWD2Q9ULI1 1742 aa8.27□□□□□ -1.09
MARK3-212ENST00000558223 E2F8A0AVK6 867 aa8.27□□□□□ -1.09
MARK3-212ENST00000558223 VPS37CA5D8V6 355 aaPredicted RBP8.27□□□□□ -1.09
MARK3-212ENST00000558223 E7EWF7 191 aa8.27□□□□□ -1.09
MARK3-212ENST00000558223 CTAGE5O15320 804 aa8.27□□□□□ -1.09
MARK3-212ENST00000558223 AKAP10O43572 662 aa8.27□□□□□ -1.09
MARK3-212ENST00000558223 CAMTA2O94983 1202 aa8.27□□□□□ -1.09
MARK3-212ENST00000558223 PCP11498 1178 aaKnown RBP8.27□□□□□ -1.09
MARK3-212ENST00000558223 IMPDH2P12268 514 aa8.27□□□□□ -1.09
MARK3-212ENST00000558223 FGFR2P21802 821 aa8.27□□□□□ -1.09
MARK3-212ENST00000558223 GPTP24298 496 aa8.27□□□□□ -1.09
MARK3-212ENST00000558223 GTF2E1P29083 439 aaPredicted RBP8.27□□□□□ -1.09
MARK3-212ENST00000558223 ADD1P35611 737 aaKnown RBP8.27□□□□□ -1.09
MARK3-212ENST00000558223 ADD2P35612 726 aa8.27□□□□□ -1.09
MARK3-212ENST00000558223 NNTQ13423 1086 aa8.27□□□□□ -1.09
MARK3-212ENST00000558223 MLC1Q15049 377 aa8.27□□□□□ -1.09
MARK3-212ENST00000558223 PPP2R5BQ15173 497 aa8.27□□□□□ -1.09
MARK3-212ENST00000558223 SF3B3Q15393 1217 aaKnown RBP8.27□□□□□ -1.09
MARK3-212ENST00000558223 SLC10A5Q5PT55 438 aa8.27□□□□□ -1.09
MARK3-212ENST00000558223 RNF180Q86T96 592 aa8.27□□□□□ -1.09
MARK3-212ENST00000558223 GAS2L3Q86XJ1 694 aa8.27□□□□□ -1.09
MARK3-212ENST00000558223 C1orf127Q8N9H9 656 aa8.27□□□□□ -1.09
MARK3-212ENST00000558223 RIN3Q8TB24 985 aa8.27□□□□□ -1.09
MARK3-212ENST00000558223 EDC3Q96F86 508 aaKnown RBP8.27□□□□□ -1.09
MARK3-212ENST00000558223 TMEM87BQ96K49 555 aa8.27□□□□□ -1.09
MARK3-212ENST00000558223 SMAD5Q99717 465 aaKnown RBP8.27□□□□□ -1.09
MARK3-212ENST00000558223 CEP44Q9C0F1 390 aa8.27□□□□□ -1.09
MARK3-212ENST00000558223 CHRDQ9H2X0 955 aa8.27□□□□□ -1.09
MARK3-212ENST00000558223 ENAMQ9NRM1 1142 aa8.27□□□□□ -1.09
MARK3-212ENST00000558223 AASDHPPTQ9NRN7 309 aa8.27□□□□□ -1.09
MARK3-212ENST00000558223 DDX19AQ9NUU7 478 aaKnown RBP8.27□□□□□ -1.09
MARK3-212ENST00000558223 MAPRE3Q9UPY8 281 aa8.27□□□□□ -1.09
MARK3-212ENST00000558223 TJP1Q07157 1748 aa8.26□□□□□ -1.09
MARK3-212ENST00000558223 TOGARAM1Q9Y4F4 1720 aa8.26□□□□□ -1.09
MARK3-212ENST00000558223 CCDC163A0A0D9SF12 145 aa8.26□□□□□ -1.09
MARK3-212ENST00000558223 RFPL3O75679 317 aa8.26□□□□□ -1.09
MARK3-212ENST00000558223 ADAMTS2O95450 1211 aa8.26□□□□□ -1.09
MARK3-212ENST00000558223 TPM3P06753 285 aa8.26□□□□□ -1.09
MARK3-212ENST00000558223 FAM153BP0C7A2 387 aa8.26□□□□□ -1.09
MARK3-212ENST00000558223 RCAN1P53805 252 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms