RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 DNERQ8NFT8 737 aa10.22□□□□□ -0.77
SNRPA1-206ENST00000558059 SYTL5Q8TDW5 730 aaPredicted RBP10.22□□□□□ -0.77
SNRPA1-206ENST00000558059 MTA3Q9BTC8 594 aa10.22□□□□□ -0.77
SNRPA1-206ENST00000558059 RIOX1Q9H6W3 641 aa10.22□□□□□ -0.77
SNRPA1-206ENST00000558059 SPC25Q9HBM1 224 aa10.22□□□□□ -0.77
SNRPA1-206ENST00000558059 PDLIM7Q9NR12 457 aa10.22□□□□□ -0.77
SNRPA1-206ENST00000558059 COL20A1Q9P218 1284 aa10.22□□□□□ -0.77
SNRPA1-206ENST00000558059 MRPL11Q9Y3B7 192 aaKnown RBP10.22□□□□□ -0.77
SNRPA1-206ENST00000558059 MYH7BA7E2Y1 1941 aa10.21□□□□□ -0.77
SNRPA1-206ENST00000558059 TRIM43BA6NCK2 446 aa10.21□□□□□ -0.77
SNRPA1-206ENST00000558059 SH2B2O14492 632 aaPredicted RBP10.21□□□□□ -0.77
SNRPA1-206ENST00000558059 ZBTB5O15062 677 aa10.21□□□□□ -0.77
SNRPA1-206ENST00000558059 DYNC1LI2O43237 492 aaPredicted RBP10.21□□□□□ -0.77
SNRPA1-206ENST00000558059 CDC45O75419 566 aa10.21□□□□□ -0.77
SNRPA1-206ENST00000558059 ASGR1P07306 291 aa10.21□□□□□ -0.77
SNRPA1-206ENST00000558059 MCM5P33992 734 aa10.21□□□□□ -0.77
SNRPA1-206ENST00000558059 CDK7P50613 346 aa10.21□□□□□ -0.77
SNRPA1-206ENST00000558059 BEX3Q00994 111 aa10.21□□□□□ -0.77
SNRPA1-206ENST00000558059 GHRHRQ02643 423 aa10.21□□□□□ -0.77
SNRPA1-206ENST00000558059 DUSP28Q4G0W2 176 aa10.21□□□□□ -0.77
SNRPA1-206ENST00000558059 CASC1Q6TDU7 716 aa10.21□□□□□ -0.77
SNRPA1-206ENST00000558059 NOL8Q76FK4 1167 aaKnown RBP10.21□□□□□ -0.77
SNRPA1-206ENST00000558059 ANKRD33Q7Z3H0 272 aa10.21□□□□□ -0.77
SNRPA1-206ENST00000558059 CATIPQ7Z7H3 387 aa10.21□□□□□ -0.77
SNRPA1-206ENST00000558059 TLK2Q86UE8 772 aa10.21□□□□□ -0.77
SNRPA1-206ENST00000558059 MCF2L2Q86YR7 1114 aa10.21□□□□□ -0.77
SNRPA1-206ENST00000558059 NUP133Q8WUM0 1156 aa10.21□□□□□ -0.77
SNRPA1-206ENST00000558059 MARVELD3Q96A59 401 aa10.21□□□□□ -0.77
SNRPA1-206ENST00000558059 TRIM43Q96BQ3 446 aaPredicted RBP10.21□□□□□ -0.77
SNRPA1-206ENST00000558059 TAAR1Q96RJ0 339 aa10.21□□□□□ -0.77
SNRPA1-206ENST00000558059 PIGSQ96S52 555 aa10.21□□□□□ -0.77
SNRPA1-206ENST00000558059 MAP3K14Q99558 947 aa10.21□□□□□ -0.77
SNRPA1-206ENST00000558059 AMNQ9BXJ7 453 aa10.21□□□□□ -0.77
SNRPA1-206ENST00000558059 STARD7Q9NQZ5 370 aa10.21□□□□□ -0.77
SNRPA1-206ENST00000558059 Q9Y3F1 56 aa10.21□□□□□ -0.77
SNRPA1-206ENST00000558059 ELP1O95163 1332 aa10.21□□□□□ -0.78
SNRPA1-206ENST00000558059 PQBP1O60828 265 aaKnown RBP10.2□□□□□ -0.78
SNRPA1-206ENST00000558059 LIFRP42702 1097 aa10.2□□□□□ -0.78
SNRPA1-206ENST00000558059 HSD17B4P51659 736 aa10.2□□□□□ -0.78
SNRPA1-206ENST00000558059 PDE4DQ08499 809 aa10.2□□□□□ -0.78
SNRPA1-206ENST00000558059 FSCN1Q16658 493 aaKnown RBP10.2□□□□□ -0.78
SNRPA1-206ENST00000558059 ZNF654Q8IZM8 581 aa10.2□□□□□ -0.78
SNRPA1-206ENST00000558059 TMEM87BQ96K49 555 aa10.2□□□□□ -0.78
SNRPA1-206ENST00000558059 GLT1D1Q96MS3 346 aa10.2□□□□□ -0.78
SNRPA1-206ENST00000558059 TOX2Q96NM4 488 aa10.2□□□□□ -0.78
SNRPA1-206ENST00000558059 MYL10Q9BUA6 226 aa10.2□□□□□ -0.78
SNRPA1-206ENST00000558059 WDR11Q9BZH6 1224 aa10.2□□□□□ -0.78
SNRPA1-206ENST00000558059 UBE2OQ9C0C9 1292 aaKnown RBP10.2□□□□□ -0.78
SNRPA1-206ENST00000558059 AP5M1Q9H0R1 490 aa10.2□□□□□ -0.78
SNRPA1-206ENST00000558059 PRDM5Q9NQX1 630 aaPredicted RBP10.2□□□□□ -0.78
SNRPA1-206ENST00000558059 PRKAG2Q9UGJ0 569 aa10.2□□□□□ -0.78
SNRPA1-206ENST00000558059 PCDHA1Q9Y5I3 950 aa10.2□□□□□ -0.78
SNRPA1-206ENST00000558059 SCN10AQ9Y5Y9 1956 aa10.19□□□□□ -0.78
SNRPA1-206ENST00000558059 GRIN2DO15399 1336 aa10.19□□□□□ -0.78
SNRPA1-206ENST00000558059 PNMA6FA0A0J9YX94 578 aa10.19□□□□□ -0.78
SNRPA1-206ENST00000558059 B4DLN1 442 aa10.19□□□□□ -0.78
SNRPA1-206ENST00000558059 ARVCFO00192 962 aa10.19□□□□□ -0.78
SNRPA1-206ENST00000558059 SOX1O00570 391 aaPredicted RBP10.19□□□□□ -0.78
SNRPA1-206ENST00000558059 KIAA0355O15063 1070 aa10.19□□□□□ -0.78
SNRPA1-206ENST00000558059 DDAH1O94760 285 aa10.19□□□□□ -0.78
SNRPA1-206ENST00000558059 CFBP00751 764 aa10.19□□□□□ -0.78
SNRPA1-206ENST00000558059 CLTBP09497 229 aa10.19□□□□□ -0.78
SNRPA1-206ENST00000558059 ITGB8P26012 769 aa10.19□□□□□ -0.78
SNRPA1-206ENST00000558059 MRPL12P52815 198 aaKnown RBP10.19□□□□□ -0.78
SNRPA1-206ENST00000558059 EXOSC10Q01780 885 aaKnown RBP10.19□□□□□ -0.78
SNRPA1-206ENST00000558059 FAAP100Q0VG06 881 aa10.19□□□□□ -0.78
SNRPA1-206ENST00000558059 TSGA10IPQ3SY00 556 aa10.19□□□□□ -0.78
SNRPA1-206ENST00000558059 CXCL17Q6UXB2 119 aa10.19□□□□□ -0.78
SNRPA1-206ENST00000558059 HOMER1Q86YM7 354 aa10.19□□□□□ -0.78
SNRPA1-206ENST00000558059 TDHQ8IZJ6 230 aa10.19□□□□□ -0.78
SNRPA1-206ENST00000558059 TMTC2Q8N394 836 aa10.19□□□□□ -0.78
SNRPA1-206ENST00000558059 SLC43A3Q8NBI5 491 aa10.19□□□□□ -0.78
SNRPA1-206ENST00000558059 NSUN6Q8TEA1 469 aaKnown RBP10.19□□□□□ -0.78
SNRPA1-206ENST00000558059 VTI1AQ96AJ9 217 aa10.19□□□□□ -0.78
SNRPA1-206ENST00000558059 IWS1Q96ST2 819 aa10.19□□□□□ -0.78
SNRPA1-206ENST00000558059 RMDN3Q96TC7 470 aa10.19□□□□□ -0.78
SNRPA1-206ENST00000558059 MPHOSPH6Q99547 160 aaKnown RBP10.19□□□□□ -0.78
SNRPA1-206ENST00000558059 LBHD1Q9BQE6 289 aaPredicted RBP10.19□□□□□ -0.78
SNRPA1-206ENST00000558059 LRRC2Q9BYS8 371 aa10.19□□□□□ -0.78
SNRPA1-206ENST00000558059 A0A0U1RQG5 324 aaPredicted RBP10.18□□□□□ -0.78
SNRPA1-206ENST00000558059 ARIH2O95376 493 aa10.18□□□□□ -0.78
SNRPA1-206ENST00000558059 NEFLP07196 543 aa10.18□□□□□ -0.78
SNRPA1-206ENST00000558059 SMARCA1P28370 1054 aa10.18□□□□□ -0.78
SNRPA1-206ENST00000558059 KIF5BP33176 963 aa10.18□□□□□ -0.78
SNRPA1-206ENST00000558059 GSE1Q14687 1217 aa10.18□□□□□ -0.78
SNRPA1-206ENST00000558059 ADCK5Q3MIX3 580 aa10.18□□□□□ -0.78
SNRPA1-206ENST00000558059 RNF20Q5VTR2 975 aa10.18□□□□□ -0.78
SNRPA1-206ENST00000558059 CCDC62Q6P9F0 684 aa10.18□□□□□ -0.78
SNRPA1-206ENST00000558059 NFXL1Q6ZNB6 911 aa10.18□□□□□ -0.78
SNRPA1-206ENST00000558059 SGMS1Q86VZ5 419 aa10.18□□□□□ -0.78
SNRPA1-206ENST00000558059 SRBD1Q8N5C6 995 aaKnown RBP10.18□□□□□ -0.78
SNRPA1-206ENST00000558059 SAMD3Q8N6K7 520 aa10.18□□□□□ -0.78
SNRPA1-206ENST00000558059 SCFD2Q8WU76 684 aa10.18□□□□□ -0.78
SNRPA1-206ENST00000558059 COPS5Q92905 334 aa10.18□□□□□ -0.78
SNRPA1-206ENST00000558059 BADQ92934 168 aa10.18□□□□□ -0.78
SNRPA1-206ENST00000558059 KCNB2Q92953 911 aa10.18□□□□□ -0.78
SNRPA1-206ENST00000558059 NEK1Q96PY6 1258 aa10.18□□□□□ -0.78
SNRPA1-206ENST00000558059 SPZ1Q9BXG8 430 aa10.18□□□□□ -0.78
SNRPA1-206ENST00000558059 PXMP2Q9NR77 195 aa10.18□□□□□ -0.78
SNRPA1-206ENST00000558059 TMEM39AQ9NV64 488 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms