RNA–Protein interactions for RNA: ENST00000557966.1

AC027088.1-201, humanhuman

TSL 2 BASIC

Gene AC027088.1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027088.1-201ENST00000557966 ITGA7Q13683 1181 aa18.85■□□□□ 0.61
AC027088.1-201ENST00000557966 SART3Q15020 963 aaKnown RBP18.85■□□□□ 0.61
AC027088.1-201ENST00000557966 DEFB123Q8N688 67 aa18.85■□□□□ 0.61
AC027088.1-201ENST00000557966 SCFD2Q8WU76 684 aa18.85■□□□□ 0.61
AC027088.1-201ENST00000557966 LY9Q9HBG7 655 aa18.85■□□□□ 0.61
AC027088.1-201ENST00000557966 TLR3O15455 904 aaKnown RBP18.84■□□□□ 0.61
AC027088.1-201ENST00000557966 CFBP00751 764 aa18.84■□□□□ 0.61
AC027088.1-201ENST00000557966 HSD17B4P51659 736 aa18.84■□□□□ 0.61
AC027088.1-201ENST00000557966 PURAQ00577 322 aaKnown RBP18.84■□□□□ 0.61
AC027088.1-201ENST00000557966 CREB3L3Q68CJ9 461 aa18.84■□□□□ 0.61
AC027088.1-201ENST00000557966 RMDN3Q96TC7 470 aa18.84■□□□□ 0.61
AC027088.1-201ENST00000557966 MYL10Q9BUA6 226 aa18.84■□□□□ 0.61
AC027088.1-201ENST00000557966 PPP1R12CQ9BZL4 782 aa18.84■□□□□ 0.61
AC027088.1-201ENST00000557966 ANO2Q9NQ90 1003 aa18.84■□□□□ 0.61
AC027088.1-201ENST00000557966 NKRFO15226 690 aaKnown RBP eCLIP18.83■□□□□ 0.6
AC027088.1-201ENST00000557966 PRC1O43663 620 aa18.83■□□□□ 0.6
AC027088.1-201ENST00000557966 B4GALT4O60513 344 aa18.83■□□□□ 0.6
AC027088.1-201ENST00000557966 MYL3P08590 195 aa18.83■□□□□ 0.6
AC027088.1-201ENST00000557966 TXNP10599 105 aaKnown RBP18.83■□□□□ 0.6
AC027088.1-201ENST00000557966 EIF2AK2P19525 551 aaKnown RBP18.83■□□□□ 0.6
AC027088.1-201ENST00000557966 NECTIN1Q15223 517 aa18.83■□□□□ 0.6
AC027088.1-201ENST00000557966 MFSD5Q6N075 450 aa18.83■□□□□ 0.6
AC027088.1-201ENST00000557966 CCDC62Q6P9F0 684 aa18.83■□□□□ 0.6
AC027088.1-201ENST00000557966 CATIPQ7Z7H3 387 aa18.83■□□□□ 0.6
AC027088.1-201ENST00000557966 NSUN6Q8TEA1 469 aaKnown RBP18.83■□□□□ 0.6
AC027088.1-201ENST00000557966 PXMP2Q9NR77 195 aa18.83■□□□□ 0.6
AC027088.1-201ENST00000557966 PCDHA1Q9Y5I3 950 aa18.83■□□□□ 0.6
AC027088.1-201ENST00000557966 UMODL1Q5DID0 1318 aa18.82■□□□□ 0.6
AC027088.1-201ENST00000557966 B4DLN1 442 aa18.82■□□□□ 0.6
AC027088.1-201ENST00000557966 SH2B2O14492 632 aaPredicted RBP18.82■□□□□ 0.6
AC027088.1-201ENST00000557966 CPT1AP50416 773 aa18.82■□□□□ 0.6
AC027088.1-201ENST00000557966 MRPL12P52815 198 aaKnown RBP18.82■□□□□ 0.6
AC027088.1-201ENST00000557966 TTLL4Q14679 1199 aa18.82■□□□□ 0.6
AC027088.1-201ENST00000557966 SEPT14Q6ZU15 432 aa18.82■□□□□ 0.6
AC027088.1-201ENST00000557966 ZNF654Q8IZM8 581 aa18.82■□□□□ 0.6
AC027088.1-201ENST00000557966 TRPV6Q9H1D0 765 aa18.82■□□□□ 0.6
AC027088.1-201ENST00000557966 POLR3EQ9NVU0 708 aa18.82■□□□□ 0.6
AC027088.1-201ENST00000557966 MTMR10Q9NXD2 777 aa18.82■□□□□ 0.6
AC027088.1-201ENST00000557966 DDAH1O94760 285 aa18.81■□□□□ 0.6
AC027088.1-201ENST00000557966 HOXA13P31271 388 aaPredicted RBP18.81■□□□□ 0.6
AC027088.1-201ENST00000557966 STXBP2Q15833 593 aa18.81■□□□□ 0.6
AC027088.1-201ENST00000557966 ARHGEF16Q5VV41 709 aa18.81■□□□□ 0.6
AC027088.1-201ENST00000557966 CASC1Q6TDU7 716 aa18.81■□□□□ 0.6
AC027088.1-201ENST00000557966 PPP1R13LQ8WUF5 828 aa18.81■□□□□ 0.6
AC027088.1-201ENST00000557966 RNPC3Q96LT9 517 aaKnown RBP18.81■□□□□ 0.6
AC027088.1-201ENST00000557966 IWS1Q96ST2 819 aa18.81■□□□□ 0.6
AC027088.1-201ENST00000557966 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.81■□□□□ 0.6
AC027088.1-201ENST00000557966 MTG1Q9BT17 334 aaPredicted RBP18.81■□□□□ 0.6
AC027088.1-201ENST00000557966 A6NJR5 290 aa18.8■□□□□ 0.6
AC027088.1-201ENST00000557966 CSF2RAP15509 400 aa18.8■□□□□ 0.6
AC027088.1-201ENST00000557966 CYP2C18P33260 490 aa18.8■□□□□ 0.6
AC027088.1-201ENST00000557966 MCM5P33992 734 aa18.8■□□□□ 0.6
AC027088.1-201ENST00000557966 ARHGAP1Q07960 439 aa18.8■□□□□ 0.6
AC027088.1-201ENST00000557966 LY6KQ17RY6 165 aa18.8■□□□□ 0.6
AC027088.1-201ENST00000557966 C16orf59Q7L2K0 433 aa18.8■□□□□ 0.6
AC027088.1-201ENST00000557966 IL31RAQ8NI17 732 aa18.8■□□□□ 0.6
AC027088.1-201ENST00000557966 PIBF1Q8WXW3 757 aa18.8■□□□□ 0.6
AC027088.1-201ENST00000557966 PDCD2LQ9BRP1 358 aa18.8■□□□□ 0.6
AC027088.1-201ENST00000557966 MTA3Q9BTC8 594 aa18.8■□□□□ 0.6
AC027088.1-201ENST00000557966 LRRC2Q9BYS8 371 aa18.8■□□□□ 0.6
AC027088.1-201ENST00000557966 ALDH8A1Q9H2A2 487 aaPredicted RBP18.8■□□□□ 0.6
AC027088.1-201ENST00000557966 PNMA6FA0A0J9YX94 578 aa18.79■□□□□ 0.6
AC027088.1-201ENST00000557966 PLEKHA8P1O95397 391 aa18.79■□□□□ 0.6
AC027088.1-201ENST00000557966 NR3C2P08235 984 aa18.79■□□□□ 0.6
AC027088.1-201ENST00000557966 RXRAP19793 462 aa18.79■□□□□ 0.6
AC027088.1-201ENST00000557966 TMEM87BQ96K49 555 aa18.79■□□□□ 0.6
AC027088.1-201ENST00000557966 MAP3K14Q99558 947 aa18.79■□□□□ 0.6
AC027088.1-201ENST00000557966 NOC4LQ9BVI4 516 aaKnown RBP18.79■□□□□ 0.6
AC027088.1-201ENST00000557966 SEZ6LQ9BYH1 1024 aa18.79■□□□□ 0.6
AC027088.1-201ENST00000557966 HIPK3Q9H422 1215 aa18.79■□□□□ 0.6
AC027088.1-201ENST00000557966 TRMT13Q9NUP7 481 aaKnown RBP18.79■□□□□ 0.6
AC027088.1-201ENST00000557966 MAP3K20Q9NYL2 800 aaKnown RBP18.79■□□□□ 0.6
AC027088.1-201ENST00000557966 LAMA2P24043 3122 aaKnown RBP18.79■□□□□ 0.6
AC027088.1-201ENST00000557966 SCN10AQ9Y5Y9 1956 aa18.79■□□□□ 0.6
AC027088.1-201ENST00000557966 KIAA1217Q5T5P2 1943 aa18.78■□□□□ 0.6
AC027088.1-201ENST00000557966 RGS20O76081 388 aa18.78■□□□□ 0.6
AC027088.1-201ENST00000557966 GH1P01241 217 aa18.78■□□□□ 0.6
AC027088.1-201ENST00000557966 MMP3P08254 477 aa18.78■□□□□ 0.6
AC027088.1-201ENST00000557966 ACRP10323 421 aa18.78■□□□□ 0.6
AC027088.1-201ENST00000557966 SMAD3P84022 425 aaKnown RBP18.78■□□□□ 0.6
AC027088.1-201ENST00000557966 PPIGQ13427 754 aaKnown RBP eCLIP18.78■□□□□ 0.6
AC027088.1-201ENST00000557966 TMEM240Q5SV17 173 aa18.78■□□□□ 0.6
AC027088.1-201ENST00000557966 FAM109BQ6ICB4 259 aaPredicted RBP18.78■□□□□ 0.6
AC027088.1-201ENST00000557966 RAB11FIP4Q86YS3 637 aa18.78■□□□□ 0.6
AC027088.1-201ENST00000557966 TMEM199Q8N511 208 aa18.78■□□□□ 0.6
AC027088.1-201ENST00000557966 CTCFLQ8NI51 663 aaPredicted RBP18.78■□□□□ 0.6
AC027088.1-201ENST00000557966 AFG1LQ8WV93 481 aa18.78■□□□□ 0.6
AC027088.1-201ENST00000557966 FAM161BQ96MY7 647 aa18.78■□□□□ 0.6
AC027088.1-201ENST00000557966 GUCD1Q96NT3 240 aa18.78■□□□□ 0.6
AC027088.1-201ENST00000557966 SPZ1Q9BXG8 430 aa18.78■□□□□ 0.6
AC027088.1-201ENST00000557966 WNT8AQ9H1J5 351 aa18.78■□□□□ 0.6
AC027088.1-201ENST00000557966 DDX41Q9UJV9 622 aaKnown RBP18.78■□□□□ 0.6
AC027088.1-201ENST00000557966 CCDC69A6NI79 296 aa18.77■□□□□ 0.6
AC027088.1-201ENST00000557966 CDC45O75419 566 aa18.77■□□□□ 0.6
AC027088.1-201ENST00000557966 EIF3JO75822 258 aaKnown RBP18.77■□□□□ 0.6
AC027088.1-201ENST00000557966 MYCLP12524 364 aaPredicted RBP18.77■□□□□ 0.6
AC027088.1-201ENST00000557966 PGM5Q15124 567 aa18.77■□□□□ 0.6
AC027088.1-201ENST00000557966 NBPF20Q3BBV1 942 aa18.77■□□□□ 0.6
AC027088.1-201ENST00000557966 BRDTQ58F21 947 aaPredicted RBP18.77■□□□□ 0.6
AC027088.1-201ENST00000557966 NFXL1Q6ZNB6 911 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms