RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 SRGAP1Q7Z6B7 1085 aa4.71□□□□□ -1.66
TDP1-217ENST00000557782 TMTC2Q8N394 836 aa4.71□□□□□ -1.66
TDP1-217ENST00000557782 EFHBQ8N7U6 833 aa4.71□□□□□ -1.66
TDP1-217ENST00000557782 MDFIQ99750 246 aa4.71□□□□□ -1.66
TDP1-217ENST00000557782 MYD88Q99836 296 aa4.71□□□□□ -1.66
TDP1-217ENST00000557782 SELENOOQ9BVL4 669 aa4.71□□□□□ -1.66
TDP1-217ENST00000557782 NGRNQ9NPE2 291 aaKnown RBP4.71□□□□□ -1.66
TDP1-217ENST00000557782 AAASQ9NRG9 546 aa4.71□□□□□ -1.66
TDP1-217ENST00000557782 DISC1Q9NRI5 854 aa4.71□□□□□ -1.66
TDP1-217ENST00000557782 GPR27Q9NS67 375 aa4.71□□□□□ -1.66
TDP1-217ENST00000557782 PDZRN3Q9UPQ7 1066 aa4.71□□□□□ -1.66
TDP1-217ENST00000557782 DMTF1Q9Y222 760 aa4.71□□□□□ -1.66
TDP1-217ENST00000557782 COQ6Q9Y2Z9 468 aa4.71□□□□□ -1.66
TDP1-217ENST00000557782 SCINQ9Y6U3 715 aa4.71□□□□□ -1.66
TDP1-217ENST00000557782 PTPDC1A2A3K4 754 aa4.7□□□□□ -1.66
TDP1-217ENST00000557782 KLRG2A4D1S0 409 aaPredicted RBP4.7□□□□□ -1.66
TDP1-217ENST00000557782 TRIM75PA6NK02 468 aa4.7□□□□□ -1.66
TDP1-217ENST00000557782 NEURL1BA8MQ27 555 aa4.7□□□□□ -1.66
TDP1-217ENST00000557782 RNGTTO60942 597 aaKnown RBP4.7□□□□□ -1.66
TDP1-217ENST00000557782 LRIG2O94898 1065 aa4.7□□□□□ -1.66
TDP1-217ENST00000557782 SRGAP2CP0DJJ0 459 aa4.7□□□□□ -1.66
TDP1-217ENST00000557782 SETSIPP0DME0 302 aa4.7□□□□□ -1.66
TDP1-217ENST00000557782 ETV3P41162 512 aa4.7□□□□□ -1.66
TDP1-217ENST00000557782 MAP2K3P46734 347 aa4.7□□□□□ -1.66
TDP1-217ENST00000557782 ST5P78524 1137 aa4.7□□□□□ -1.66
TDP1-217ENST00000557782 BIRC3Q13489 604 aa4.7□□□□□ -1.66
TDP1-217ENST00000557782 LRRC32Q14392 662 aa4.7□□□□□ -1.66
TDP1-217ENST00000557782 ODF1Q14990 250 aa4.7□□□□□ -1.66
TDP1-217ENST00000557782 CLUL1Q15846 466 aa4.7□□□□□ -1.66
TDP1-217ENST00000557782 DPY19L1Q2PZI1 675 aa4.7□□□□□ -1.66
TDP1-217ENST00000557782 MSL1Q68DK7 614 aa4.7□□□□□ -1.66
TDP1-217ENST00000557782 SV2AQ7L0J3 742 aa4.7□□□□□ -1.66
TDP1-217ENST00000557782 SRLQ86TD4 932 aa4.7□□□□□ -1.66
TDP1-217ENST00000557782 MYLK4Q86YV6 388 aaPredicted RBP4.7□□□□□ -1.66
TDP1-217ENST00000557782 C2orf69Q8N8R5 385 aa4.7□□□□□ -1.66
TDP1-217ENST00000557782 KREMEN2Q8NCW0 462 aa4.7□□□□□ -1.66
TDP1-217ENST00000557782 SLC35G2Q8TBE7 412 aa4.7□□□□□ -1.66
TDP1-217ENST00000557782 PARD3BQ8TEW8 1205 aa4.7□□□□□ -1.66
TDP1-217ENST00000557782 PPP1R13LQ8WUF5 828 aa4.7□□□□□ -1.66
TDP1-217ENST00000557782 RNF141Q8WVD5 230 aa4.7□□□□□ -1.66
TDP1-217ENST00000557782 ISL2Q96A47 359 aa4.7□□□□□ -1.66
TDP1-217ENST00000557782 VWCEQ96DN2 955 aa4.7□□□□□ -1.66
TDP1-217ENST00000557782 FBXL18Q96ME1 805 aa4.7□□□□□ -1.66
TDP1-217ENST00000557782 RNF38Q9H0F5 515 aa4.7□□□□□ -1.66
TDP1-217ENST00000557782 CSRNP2Q9H175 543 aa4.7□□□□□ -1.66
TDP1-217ENST00000557782 FAM204AQ9H8W3 233 aa4.7□□□□□ -1.66
TDP1-217ENST00000557782 GFOD1Q9NXC2 390 aa4.7□□□□□ -1.66
TDP1-217ENST00000557782 KLF15Q9UIH9 416 aa4.7□□□□□ -1.66
TDP1-217ENST00000557782 ABHD14A-ACY1A0A1B0GW23 586 aa4.69□□□□□ -1.66
TDP1-217ENST00000557782 F5H423 210 aaPredicted RBP4.69□□□□□ -1.66
TDP1-217ENST00000557782 SLC26A4O43511 780 aa4.69□□□□□ -1.66
TDP1-217ENST00000557782 AP1G1O43747 822 aa4.69□□□□□ -1.66
TDP1-217ENST00000557782 NBNO60934 754 aa4.69□□□□□ -1.66
TDP1-217ENST00000557782 ADAM11O75078 769 aa4.69□□□□□ -1.66
TDP1-217ENST00000557782 DLGAP3O95886 979 aa4.69□□□□□ -1.66
TDP1-217ENST00000557782 SOD2P04179 222 aa4.69□□□□□ -1.66
TDP1-217ENST00000557782 CKMP06732 381 aa4.69□□□□□ -1.66
TDP1-217ENST00000557782 NEFMP07197 916 aa4.69□□□□□ -1.66
TDP1-217ENST00000557782 TYRP1P17643 537 aa4.69□□□□□ -1.66
TDP1-217ENST00000557782 RHCEP18577 417 aa4.69□□□□□ -1.66
TDP1-217ENST00000557782 GRK2P25098 689 aa4.69□□□□□ -1.66
TDP1-217ENST00000557782 CD68P34810 354 aaPredicted RBP4.69□□□□□ -1.66
TDP1-217ENST00000557782 LTBRP36941 435 aa4.69□□□□□ -1.66
TDP1-217ENST00000557782 IREB2P48200 963 aaKnown RBP4.69□□□□□ -1.66
TDP1-217ENST00000557782 SARSP49591 514 aaKnown RBP4.69□□□□□ -1.66
TDP1-217ENST00000557782 MECP2P51608 486 aaKnown RBP4.69□□□□□ -1.66
TDP1-217ENST00000557782 HTRA3P83110 453 aa4.69□□□□□ -1.66
TDP1-217ENST00000557782 RHDQ02161 417 aa4.69□□□□□ -1.66
TDP1-217ENST00000557782 GALEQ14376 348 aa4.69□□□□□ -1.66
TDP1-217ENST00000557782 ACAP2Q15057 778 aa4.69□□□□□ -1.66
TDP1-217ENST00000557782 KIZQ2M2Z5 673 aa4.69□□□□□ -1.66
TDP1-217ENST00000557782 E4F1Q66K89 784 aaPredicted RBP4.69□□□□□ -1.66
TDP1-217ENST00000557782 CWF19L1Q69YN2 538 aaKnown RBP4.69□□□□□ -1.66
TDP1-217ENST00000557782 DENND5AQ6IQ26 1287 aa4.69□□□□□ -1.66
TDP1-217ENST00000557782 ARMCX6Q7L4S7 300 aa4.69□□□□□ -1.66
TDP1-217ENST00000557782 CHST15Q7LFX5 561 aaPredicted RBP4.69□□□□□ -1.66
TDP1-217ENST00000557782 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.69□□□□□ -1.66
TDP1-217ENST00000557782 FAM43AQ8N2R8 423 aa4.69□□□□□ -1.66
TDP1-217ENST00000557782 DNAJB8Q8NHS0 232 aa4.69□□□□□ -1.66
TDP1-217ENST00000557782 DIO2Q92813 273 aa4.69□□□□□ -1.66
TDP1-217ENST00000557782 PRDM14Q9GZV8 571 aa4.69□□□□□ -1.66
TDP1-217ENST00000557782 AS3MTQ9HBK9 375 aa4.69□□□□□ -1.66
TDP1-217ENST00000557782 CYP4F12Q9HCS2 524 aa4.69□□□□□ -1.66
TDP1-217ENST00000557782 ATP13A2Q9NQ11 1180 aa4.69□□□□□ -1.66
TDP1-217ENST00000557782 PTPN22Q9Y2R2 807 aa4.69□□□□□ -1.66
TDP1-217ENST00000557782 MORC2Q9Y6X9 1032 aaPredicted RBP4.69□□□□□ -1.66
TDP1-217ENST00000557782 GOLGA8AA7E2F4 631 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 GOLGA8BA8MQT2 603 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 H7C1D1 291 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 TPP1O14773 563 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 DDX3YO15523 660 aaKnown RBP4.68□□□□□ -1.66
TDP1-217ENST00000557782 PCDHGA12O60330 932 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 ZBED1O96006 694 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 ALBP02768 609 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 THBDP07204 575 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 LSP1P33241 339 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 CASP2P42575 452 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 DNM2P50570 870 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 SCAND1P57086 179 aa4.68□□□□□ -1.66
TDP1-217ENST00000557782 CYP4F3Q08477 520 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms