RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 PTPDC1A2A3K4 754 aa21.66■■□□□ 1.06
ABCD4-228ENST00000557588 WDR5P61964 334 aaKnown RBP21.66■■□□□ 1.06
ABCD4-228ENST00000557588 ZMYM1Q5SVZ6 1142 aa21.66■■□□□ 1.06
ABCD4-228ENST00000557588 SYDE2Q5VT97 1194 aa21.66■■□□□ 1.06
ABCD4-228ENST00000557588 AFAP1L1Q8TED9 768 aa21.66■■□□□ 1.06
ABCD4-228ENST00000557588 PPP1R13LQ8WUF5 828 aa21.66■■□□□ 1.06
ABCD4-228ENST00000557588 CLEC4DQ8WXI8 215 aa21.66■■□□□ 1.06
ABCD4-228ENST00000557588 MUC6Q6W4X9 2439 aa21.66■■□□□ 1.06
ABCD4-228ENST00000557588 TTC41PQ6P2S7 1318 aa21.65■■□□□ 1.06
ABCD4-228ENST00000557588 SIP14410 1827 aa21.65■■□□□ 1.06
ABCD4-228ENST00000557588 LCHNA4D1U4 455 aa21.65■■□□□ 1.06
ABCD4-228ENST00000557588 SLC16A2P36021 539 aa21.65■■□□□ 1.06
ABCD4-228ENST00000557588 KCNJ6P48051 423 aa21.65■■□□□ 1.06
ABCD4-228ENST00000557588 PDE4DQ08499 809 aa21.65■■□□□ 1.06
ABCD4-228ENST00000557588 TTBK2Q6IQ55 1244 aa21.65■■□□□ 1.06
ABCD4-228ENST00000557588 CCDC155Q8N6L0 562 aa21.65■■□□□ 1.06
ABCD4-228ENST00000557588 CAGE1Q8TC20 777 aa21.65■■□□□ 1.06
ABCD4-228ENST00000557588 CTAGE1Q96RT6 745 aa21.65■■□□□ 1.06
ABCD4-228ENST00000557588 MPHOSPH6Q99547 160 aaKnown RBP21.65■■□□□ 1.06
ABCD4-228ENST00000557588 DCTPP1Q9H773 170 aa21.65■■□□□ 1.06
ABCD4-228ENST00000557588 ANAPC4Q9UJX5 808 aa21.65■■□□□ 1.06
ABCD4-228ENST00000557588 PNMA2Q9UL42 364 aa21.65■■□□□ 1.06
ABCD4-228ENST00000557588 MTMR7Q9Y216 660 aa21.65■■□□□ 1.06
ABCD4-228ENST00000557588 NOD1Q9Y239 953 aa21.65■■□□□ 1.06
ABCD4-228ENST00000557588 CALML3P27482 149 aa21.64■■□□□ 1.05
ABCD4-228ENST00000557588 CTDSPL2Q05D32 466 aa21.64■■□□□ 1.05
ABCD4-228ENST00000557588 RNF207Q6ZRF8 634 aa21.64■■□□□ 1.05
ABCD4-228ENST00000557588 SESTD1Q86VW0 696 aa21.64■■□□□ 1.05
ABCD4-228ENST00000557588 DNERQ8NFT8 737 aa21.64■■□□□ 1.05
ABCD4-228ENST00000557588 PI4K2BQ8TCG2 481 aa21.64■■□□□ 1.05
ABCD4-228ENST00000557588 GDPD5Q8WTR4 605 aa21.64■■□□□ 1.05
ABCD4-228ENST00000557588 COPS5Q92905 334 aa21.64■■□□□ 1.05
ABCD4-228ENST00000557588 INCENPQ9NQS7 918 aa21.64■■□□□ 1.05
ABCD4-228ENST00000557588 TRIP12Q14669 1992 aaPredicted RBP21.64■■□□□ 1.05
ABCD4-228ENST00000557588 WDR19Q8NEZ3 1342 aa21.63■■□□□ 1.05
ABCD4-228ENST00000557588 PI4K2BG5E9Z4 385 aa21.63■■□□□ 1.05
ABCD4-228ENST00000557588 ORC4O43929 436 aa21.63■■□□□ 1.05
ABCD4-228ENST00000557588 RANBP6O60518 1105 aaKnown RBP21.63■■□□□ 1.05
ABCD4-228ENST00000557588 RPS6P62753 249 aaKnown RBP21.63■■□□□ 1.05
ABCD4-228ENST00000557588 RBL2Q08999 1139 aa21.63■■□□□ 1.05
ABCD4-228ENST00000557588 GPNMBQ14956 572 aa21.63■■□□□ 1.05
ABCD4-228ENST00000557588 PTGISQ16647 500 aa21.63■■□□□ 1.05
ABCD4-228ENST00000557588 FSD1Q9BTV5 496 aa21.63■■□□□ 1.05
ABCD4-228ENST00000557588 FAM86C2PA6NEL3 165 aa21.62■■□□□ 1.05
ABCD4-228ENST00000557588 FGRP09769 529 aa21.62■■□□□ 1.05
ABCD4-228ENST00000557588 CD320Q9NPF0 282 aa21.62■■□□□ 1.05
ABCD4-228ENST00000557588 FRMPD2Q68DX3 1309 aaPredicted RBP21.61■■□□□ 1.05
ABCD4-228ENST00000557588 ARIH2O95376 493 aa21.61■■□□□ 1.05
ABCD4-228ENST00000557588 PARNO95453 639 aaKnown RBP21.61■■□□□ 1.05
ABCD4-228ENST00000557588 CXCL10P02778 98 aa21.61■■□□□ 1.05
ABCD4-228ENST00000557588 TXNP10599 105 aaKnown RBP21.61■■□□□ 1.05
ABCD4-228ENST00000557588 TOP1P11387 765 aaKnown RBP21.61■■□□□ 1.05
ABCD4-228ENST00000557588 SELPP16109 830 aa21.61■■□□□ 1.05
ABCD4-228ENST00000557588 DEFB103AP81534 67 aa21.61■■□□□ 1.05
ABCD4-228ENST00000557588 CNKSR3Q6P9H4 555 aa21.61■■□□□ 1.05
ABCD4-228ENST00000557588 LRRC8DQ7L1W4 858 aa21.61■■□□□ 1.05
ABCD4-228ENST00000557588 GJB5O95377 273 aa21.6■■□□□ 1.05
ABCD4-228ENST00000557588 GDF6Q6KF10 455 aaPredicted RBP21.6■■□□□ 1.05
ABCD4-228ENST00000557588 TMCO2Q7Z6W1 182 aaPredicted RBP21.6■■□□□ 1.05
ABCD4-228ENST00000557588 DHX38Q92620 1227 aaKnown RBP21.6■■□□□ 1.05
ABCD4-228ENST00000557588 TMEM47Q9BQJ4 181 aa21.6■■□□□ 1.05
ABCD4-228ENST00000557588 UBE2ZQ9H832 354 aaPredicted RBP21.6■■□□□ 1.05
ABCD4-228ENST00000557588 MMP3P08254 477 aa21.59■■□□□ 1.05
ABCD4-228ENST00000557588 PDHBP11177 359 aa21.59■■□□□ 1.05
ABCD4-228ENST00000557588 ERVK-21P61565 698 aa21.59■■□□□ 1.05
ABCD4-228ENST00000557588 C20orf194Q5TEA3 1177 aa21.59■■□□□ 1.05
ABCD4-228ENST00000557588 CCDC62Q6P9F0 684 aa21.59■■□□□ 1.05
ABCD4-228ENST00000557588 TGS1Q96RS0 853 aaKnown RBP21.59■■□□□ 1.05
ABCD4-228ENST00000557588 ZBED2Q9BTP6 218 aa21.59■■□□□ 1.05
ABCD4-228ENST00000557588 SUGCTQ9HAC7 445 aa21.59■■□□□ 1.05
ABCD4-228ENST00000557588 GPCPD1Q9NPB8 672 aa21.59■■□□□ 1.05
ABCD4-228ENST00000557588 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.58■■□□□ 1.05
ABCD4-228ENST00000557588 B4DLN1 442 aa21.58■■□□□ 1.05
ABCD4-228ENST00000557588 MRPL12P52815 198 aaKnown RBP21.58■■□□□ 1.05
ABCD4-228ENST00000557588 LEXMQ3ZCV2 418 aa21.58■■□□□ 1.05
ABCD4-228ENST00000557588 VPS53Q5VIR6 699 aa21.58■■□□□ 1.05
ABCD4-228ENST00000557588 AFG1LQ8WV93 481 aa21.58■■□□□ 1.05
ABCD4-228ENST00000557588 KAT2BQ92831 832 aa21.58■■□□□ 1.05
ABCD4-228ENST00000557588 RAD9AQ99638 391 aa21.58■■□□□ 1.05
ABCD4-228ENST00000557588 TCP11L1Q9NUJ3 509 aa21.58■■□□□ 1.05
ABCD4-228ENST00000557588 KIAA1217Q5T5P2 1943 aa21.58■■□□□ 1.04
ABCD4-228ENST00000557588 ABHD14A-ACY1A0A1B0GW23 586 aa21.57■■□□□ 1.04
ABCD4-228ENST00000557588 LINC01553A4QN01 128 aa21.57■■□□□ 1.04
ABCD4-228ENST00000557588 PRR33A8MZF0 331 aa21.57■■□□□ 1.04
ABCD4-228ENST00000557588 NBNO60934 754 aa21.57■■□□□ 1.04
ABCD4-228ENST00000557588 EFCAB14O75071 495 aa21.57■■□□□ 1.04
ABCD4-228ENST00000557588 ARHGAP1Q07960 439 aa21.57■■□□□ 1.04
ABCD4-228ENST00000557588 ZNF543Q08ER8 600 aa21.57■■□□□ 1.04
ABCD4-228ENST00000557588 RGS22Q8NE09 1264 aa21.57■■□□□ 1.04
ABCD4-228ENST00000557588 RCAN3Q9UKA8 241 aa21.57■■□□□ 1.04
ABCD4-228ENST00000557588 MTUS1Q9ULD2 1270 aa21.57■■□□□ 1.04
ABCD4-228ENST00000557588 GH1P01241 217 aa21.56■■□□□ 1.04
ABCD4-228ENST00000557588 SNHG28P0DPA3 235 aa21.56■■□□□ 1.04
ABCD4-228ENST00000557588 CKBP12277 381 aa21.56■■□□□ 1.04
ABCD4-228ENST00000557588 CHMP4BP1P59074 171 aa21.56■■□□□ 1.04
ABCD4-228ENST00000557588 TCTN1Q2MV58 587 aa21.56■■□□□ 1.04
ABCD4-228ENST00000557588 FAM178BQ8IXR5 827 aa21.56■■□□□ 1.04
ABCD4-228ENST00000557588 MAF1Q9H063 256 aa21.56■■□□□ 1.04
ABCD4-228ENST00000557588 GTF2IRD1Q9UHL9 959 aa21.56■■□□□ 1.04
ABCD4-228ENST00000557588 ALX1Q15699 326 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms