RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 COL6A1P12109 1028 aa18.34■□□□□ 0.53
TUBB3-214ENST00000557490 PLA2G5P39877 138 aa18.34■□□□□ 0.53
TUBB3-214ENST00000557490 RCAN1P53805 252 aa18.34■□□□□ 0.53
TUBB3-214ENST00000557490 LRRC41Q15345 812 aa18.34■□□□□ 0.53
TUBB3-214ENST00000557490 NOL8Q76FK4 1167 aaKnown RBP18.34■□□□□ 0.53
TUBB3-214ENST00000557490 RUFY3Q7L099 469 aa18.34■□□□□ 0.53
TUBB3-214ENST00000557490 EEPD1Q7L9B9 569 aa18.34■□□□□ 0.53
TUBB3-214ENST00000557490 FBXO16Q8IX29 292 aaPredicted RBP18.34■□□□□ 0.53
TUBB3-214ENST00000557490 FBXL16Q8N461 479 aa18.34■□□□□ 0.53
TUBB3-214ENST00000557490 NSUN6Q8TEA1 469 aaKnown RBP18.34■□□□□ 0.53
TUBB3-214ENST00000557490 SYMPKQ92797 1274 aaKnown RBP18.34■□□□□ 0.53
TUBB3-214ENST00000557490 BRF1Q92994 677 aa18.34■□□□□ 0.53
TUBB3-214ENST00000557490 LENG1Q96BZ8 264 aaPredicted RBP18.34■□□□□ 0.53
TUBB3-214ENST00000557490 CDX2Q99626 313 aaPredicted RBP18.34■□□□□ 0.53
TUBB3-214ENST00000557490 TM6SF1Q9BZW5 370 aa18.34■□□□□ 0.53
TUBB3-214ENST00000557490 SPC25Q9HBM1 224 aa18.34■□□□□ 0.53
TUBB3-214ENST00000557490 ZSWIM6Q9HCJ5 1215 aa18.34■□□□□ 0.53
TUBB3-214ENST00000557490 MAP3K20Q9NYL2 800 aaKnown RBP18.34■□□□□ 0.53
TUBB3-214ENST00000557490 DNAH12Q6ZR08 3092 aa18.34■□□□□ 0.53
TUBB3-214ENST00000557490 GCOM1H8Y6P7 765 aaPredicted RBP18.33■□□□□ 0.52
TUBB3-214ENST00000557490 POLR2MP0CAP2 368 aa18.33■□□□□ 0.52
TUBB3-214ENST00000557490 HSD17B4P51659 736 aa18.33■□□□□ 0.52
TUBB3-214ENST00000557490 MDM2Q00987 491 aaPredicted RBP18.33■□□□□ 0.52
TUBB3-214ENST00000557490 TNFAIP2Q03169 654 aa18.33■□□□□ 0.52
TUBB3-214ENST00000557490 APOBRQ0VD83 1088 aa18.33■□□□□ 0.52
TUBB3-214ENST00000557490 IQSEC1Q6DN90 963 aa18.33■□□□□ 0.52
TUBB3-214ENST00000557490 CCDC82Q8N4S0 544 aa18.33■□□□□ 0.52
TUBB3-214ENST00000557490 TAAR1Q96RJ0 339 aa18.33■□□□□ 0.52
TUBB3-214ENST00000557490 RMDN3Q96TC7 470 aa18.33■□□□□ 0.52
TUBB3-214ENST00000557490 SENP6Q9GZR1 1112 aaPredicted RBP18.33■□□□□ 0.52
TUBB3-214ENST00000557490 SYNRGQ9UMZ2 1314 aa18.32■□□□□ 0.52
TUBB3-214ENST00000557490 CCDC196A0A1B0GTZ2 297 aa18.32■□□□□ 0.52
TUBB3-214ENST00000557490 OPLAHO14841 1288 aa18.32■□□□□ 0.52
TUBB3-214ENST00000557490 EDNRBP24530 442 aa18.32■□□□□ 0.52
TUBB3-214ENST00000557490 ADCYAP1R1P41586 468 aa18.32■□□□□ 0.52
TUBB3-214ENST00000557490 METAP2P50579 478 aaKnown RBP eCLIP18.32■□□□□ 0.52
TUBB3-214ENST00000557490 GHRHRQ02643 423 aa18.32■□□□□ 0.52
TUBB3-214ENST00000557490 PPP2R5BQ15173 497 aa18.32■□□□□ 0.52
TUBB3-214ENST00000557490 ARHGEF16Q5VV41 709 aa18.32■□□□□ 0.52
TUBB3-214ENST00000557490 COL20A1Q9P218 1284 aa18.32■□□□□ 0.52
TUBB3-214ENST00000557490 ADAMTS4O75173 837 aa18.31■□□□□ 0.52
TUBB3-214ENST00000557490 HOXA13P31271 388 aaPredicted RBP18.31■□□□□ 0.52
TUBB3-214ENST00000557490 TAPT1Q6NXT6 567 aa18.31■□□□□ 0.52
TUBB3-214ENST00000557490 IWS1Q96ST2 819 aa18.31■□□□□ 0.52
TUBB3-214ENST00000557490 AGXT2Q9BYV1 514 aa18.31■□□□□ 0.52
TUBB3-214ENST00000557490 PDGFCQ9NRA1 345 aa18.31■□□□□ 0.52
TUBB3-214ENST00000557490 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.3■□□□□ 0.52
TUBB3-214ENST00000557490 ADCY6O43306 1168 aa18.3■□□□□ 0.52
TUBB3-214ENST00000557490 C6orf222P0C671 652 aaPredicted RBP18.3■□□□□ 0.52
TUBB3-214ENST00000557490 SMPD1P17405 629 aa18.3■□□□□ 0.52
TUBB3-214ENST00000557490 ANAPC15P60006 121 aa18.3■□□□□ 0.52
TUBB3-214ENST00000557490 CUL5Q93034 780 aa18.3■□□□□ 0.52
TUBB3-214ENST00000557490 TSEN34Q9BSV6 310 aaKnown RBP18.3■□□□□ 0.52
TUBB3-214ENST00000557490 UPF3BQ9BZI7 483 aaKnown RBP18.3■□□□□ 0.52
TUBB3-214ENST00000557490 AP5M1Q9H0R1 490 aa18.3■□□□□ 0.52
TUBB3-214ENST00000557490 UPF3AQ9H1J1 476 aaKnown RBP18.3■□□□□ 0.52
TUBB3-214ENST00000557490 PXMP2Q9NR77 195 aa18.3■□□□□ 0.52
TUBB3-214ENST00000557490 PHF24Q9UPV7 400 aa18.3■□□□□ 0.52
TUBB3-214ENST00000557490 CNTNAP5Q8WYK1 1306 aa18.29■□□□□ 0.52
TUBB3-214ENST00000557490 BDP1A6H8Y1 2624 aa18.29■□□□□ 0.52
TUBB3-214ENST00000557490 FRMPD3Q5JV73 1810 aa18.29■□□□□ 0.52
TUBB3-214ENST00000557490 hCG_1642624A0A1W2PR95 340 aa18.29■□□□□ 0.52
TUBB3-214ENST00000557490 EIF2AK2P19525 551 aaKnown RBP18.29■□□□□ 0.52
TUBB3-214ENST00000557490 GJA9P57773 515 aa18.29■□□□□ 0.52
TUBB3-214ENST00000557490 STXBP2Q15833 593 aa18.29■□□□□ 0.52
TUBB3-214ENST00000557490 HEATR3Q7Z4Q2 680 aa18.29■□□□□ 0.52
TUBB3-214ENST00000557490 FCHSD1Q86WN1 690 aa18.29■□□□□ 0.52
TUBB3-214ENST00000557490 PCSK9Q8NBP7 692 aaKnown RBP18.29■□□□□ 0.52
TUBB3-214ENST00000557490 KLHDC9Q8NEP7 349 aa18.29■□□□□ 0.52
TUBB3-214ENST00000557490 SCFD2Q8WU76 684 aa18.29■□□□□ 0.52
TUBB3-214ENST00000557490 WDR11Q9BZH6 1224 aa18.29■□□□□ 0.52
TUBB3-214ENST00000557490 FAM217BQ9NTX9 383 aaPredicted RBP18.29■□□□□ 0.52
TUBB3-214ENST00000557490 PDRG1Q9NUG6 133 aa18.29■□□□□ 0.52
TUBB3-214ENST00000557490 GNEQ9Y223 722 aaKnown RBP18.29■□□□□ 0.52
TUBB3-214ENST00000557490 Q9Y3F1 56 aa18.29■□□□□ 0.52
TUBB3-214ENST00000557490 BAZ2BQ9UIF8 2168 aaKnown RBP18.29■□□□□ 0.52
TUBB3-214ENST00000557490 MYH6P13533 1939 aa18.29■□□□□ 0.52
TUBB3-214ENST00000557490 MCM3APO60318 1980 aa18.28■□□□□ 0.52
TUBB3-214ENST00000557490 LCTP09848 1927 aa18.28■□□□□ 0.52
TUBB3-214ENST00000557490 RBM47A0AV96 593 aaKnown RBP18.28■□□□□ 0.52
TUBB3-214ENST00000557490 TNFRSF10AO00220 468 aa18.28■□□□□ 0.52
TUBB3-214ENST00000557490 DYNC1LI2O43237 492 aaPredicted RBP18.28■□□□□ 0.52
TUBB3-214ENST00000557490 NR3C2P08235 984 aa18.28■□□□□ 0.52
TUBB3-214ENST00000557490 CST5P28325 142 aaPredicted RBP18.28■□□□□ 0.52
TUBB3-214ENST00000557490 CDC27P30260 824 aa18.28■□□□□ 0.52
TUBB3-214ENST00000557490 ATN1P54259 1190 aaPredicted RBP18.28■□□□□ 0.52
TUBB3-214ENST00000557490 LRRC26Q2I0M4 334 aa18.28■□□□□ 0.52
TUBB3-214ENST00000557490 DUSP28Q4G0W2 176 aa18.28■□□□□ 0.52
TUBB3-214ENST00000557490 GNASQ5JWF2 1037 aa18.28■□□□□ 0.52
TUBB3-214ENST00000557490 TLK2Q86UE8 772 aa18.28■□□□□ 0.52
TUBB3-214ENST00000557490 SMARCC2Q8TAQ2 1214 aa18.28■□□□□ 0.52
TUBB3-214ENST00000557490 FERMT2Q96AC1 680 aa18.28■□□□□ 0.52
TUBB3-214ENST00000557490 V9GY48 417 aaPredicted RBP18.28■□□□□ 0.52
TUBB3-214ENST00000557490 MYADML2A6NDP7 307 aa18.27■□□□□ 0.52
TUBB3-214ENST00000557490 MOXD2PA6NHM9 499 aa18.27■□□□□ 0.52
TUBB3-214ENST00000557490 EIF3JO75822 258 aaKnown RBP18.27■□□□□ 0.52
TUBB3-214ENST00000557490 ADD1P35611 737 aaKnown RBP18.27■□□□□ 0.52
TUBB3-214ENST00000557490 ACLYP53396 1101 aa18.27■□□□□ 0.52
TUBB3-214ENST00000557490 EVCP57679 992 aa18.27■□□□□ 0.52
TUBB3-214ENST00000557490 FUT2Q10981 343 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms