RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 PDHXO00330 501 aa6.12□□□□□ -1.43
ATXN3-247ENST00000557311 HOXD8P13378 290 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-247ENST00000557311 ACPPP15309 386 aa6.12□□□□□ -1.43
ATXN3-247ENST00000557311 CRKP46108 304 aa6.12□□□□□ -1.43
ATXN3-247ENST00000557311 LAMB2P55268 1798 aa6.12□□□□□ -1.43
ATXN3-247ENST00000557311 FCGRTP55899 365 aa6.12□□□□□ -1.43
ATXN3-247ENST00000557311 HDLBPQ00341 1268 aaKnown RBP6.12□□□□□ -1.43
ATXN3-247ENST00000557311 IFIT5Q13325 482 aaKnown RBP6.12□□□□□ -1.43
ATXN3-247ENST00000557311 GCKRQ14397 625 aa6.12□□□□□ -1.43
ATXN3-247ENST00000557311 GRIK5Q16478 980 aa6.12□□□□□ -1.43
ATXN3-247ENST00000557311 CWF19L2Q2TBE0 894 aaKnown RBP6.12□□□□□ -1.43
ATXN3-247ENST00000557311 LRIT3Q3SXY7 679 aa6.12□□□□□ -1.43
ATXN3-247ENST00000557311 MFSD14BQ5SR56 506 aa6.12□□□□□ -1.43
ATXN3-247ENST00000557311 DDX60Q8IY21 1712 aaKnown RBP6.12□□□□□ -1.43
ATXN3-247ENST00000557311 GJD3Q8N144 294 aa6.12□□□□□ -1.43
ATXN3-247ENST00000557311 C8orf58Q8NAV2 365 aa6.12□□□□□ -1.43
ATXN3-247ENST00000557311 TDRD7Q8NHU6 1098 aaKnown RBP6.12□□□□□ -1.43
ATXN3-247ENST00000557311 ZKSCAN4Q969J2 545 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-247ENST00000557311 YTHDC1Q96MU7 727 aaKnown RBP6.12□□□□□ -1.43
ATXN3-247ENST00000557311 WRNIP1Q96S55 665 aa6.12□□□□□ -1.43
ATXN3-247ENST00000557311 OSMRQ99650 979 aa6.12□□□□□ -1.43
ATXN3-247ENST00000557311 MRIQ9BWK5 157 aa6.12□□□□□ -1.43
ATXN3-247ENST00000557311 MUC3BQ9H195 1237 aa6.12□□□□□ -1.43
ATXN3-247ENST00000557311 MTMR10Q9NXD2 777 aa6.12□□□□□ -1.43
ATXN3-247ENST00000557311 JAG2Q9Y219 1238 aa6.12□□□□□ -1.43
ATXN3-247ENST00000557311 IVNS1ABPQ9Y6Y0 642 aa6.12□□□□□ -1.43
ATXN3-247ENST00000557311 PDE2AO00408 941 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-247ENST00000557311 DYRK3O43781 588 aa6.11□□□□□ -1.43
ATXN3-247ENST00000557311 ADCY3O60266 1144 aa6.11□□□□□ -1.43
ATXN3-247ENST00000557311 MAPK1P28482 360 aa6.11□□□□□ -1.43
ATXN3-247ENST00000557311 HIBADHP31937 336 aaKnown RBP6.11□□□□□ -1.43
ATXN3-247ENST00000557311 CASP7P55210 303 aa6.11□□□□□ -1.43
ATXN3-247ENST00000557311 ARHGAP4P98171 946 aa6.11□□□□□ -1.43
ATXN3-247ENST00000557311 NRG1Q02297 640 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-247ENST00000557311 PRKCZQ05513 592 aa6.11□□□□□ -1.43
ATXN3-247ENST00000557311 FKBP1CQ5VVH2 108 aa6.11□□□□□ -1.43
ATXN3-247ENST00000557311 DCAF15Q66K64 600 aa6.11□□□□□ -1.43
ATXN3-247ENST00000557311 NECAB2Q7Z6G3 386 aa6.11□□□□□ -1.43
ATXN3-247ENST00000557311 FAM83AQ86UY5 434 aa6.11□□□□□ -1.43
ATXN3-247ENST00000557311 CACTIN-AS1Q8N1I8 211 aa6.11□□□□□ -1.43
ATXN3-247ENST00000557311 DTWD1Q8N5C7 304 aa6.11□□□□□ -1.43
ATXN3-247ENST00000557311 CEP120Q8N960 986 aa6.11□□□□□ -1.43
ATXN3-247ENST00000557311 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-247ENST00000557311 SLC7A3Q8WY07 619 aa6.11□□□□□ -1.43
ATXN3-247ENST00000557311 PAWRQ96IZ0 340 aaKnown RBP6.11□□□□□ -1.43
ATXN3-247ENST00000557311 DEFB118Q96PH6 123 aa6.11□□□□□ -1.43
ATXN3-247ENST00000557311 PARK7Q99497 189 aaKnown RBP6.11□□□□□ -1.43
ATXN3-247ENST00000557311 ZNF341Q9BYN7 854 aa6.11□□□□□ -1.43
ATXN3-247ENST00000557311 SH2B1Q9NRF2 756 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-247ENST00000557311 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-247ENST00000557311 HTTP42858 3142 aa6.11□□□□□ -1.43
ATXN3-247ENST00000557311 SZT2Q5T011 3432 aa6.11□□□□□ -1.43
ATXN3-247ENST00000557311 CXCL11O14625 94 aa6.1□□□□□ -1.43
ATXN3-247ENST00000557311 PLIN1O60240 522 aa6.1□□□□□ -1.43
ATXN3-247ENST00000557311 KIF4AO95239 1232 aa6.1□□□□□ -1.43
ATXN3-247ENST00000557311 FLT3LGP49771 235 aa6.1□□□□□ -1.43
ATXN3-247ENST00000557311 KCNA1Q09470 495 aa6.1□□□□□ -1.43
ATXN3-247ENST00000557311 UBE4AQ14139 1066 aa6.1□□□□□ -1.43
ATXN3-247ENST00000557311 WDR43Q15061 677 aaKnown RBP eCLIP6.1□□□□□ -1.43
ATXN3-247ENST00000557311 LDHAL6AQ6ZMR3 332 aa6.1□□□□□ -1.43
ATXN3-247ENST00000557311 Q7L0L9 218 aa6.1□□□□□ -1.43
ATXN3-247ENST00000557311 MIGA2Q7L4E1 593 aa6.1□□□□□ -1.43
ATXN3-247ENST00000557311 FBXO11Q86XK2 927 aa6.1□□□□□ -1.43
ATXN3-247ENST00000557311 TBC1D22AQ8WUA7 517 aa6.1□□□□□ -1.43
ATXN3-247ENST00000557311 FAM84BQ96KN1 310 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-247ENST00000557311 POP1Q99575 1024 aaKnown RBP6.1□□□□□ -1.43
ATXN3-247ENST00000557311 STK31Q9BXU1 1019 aa6.1□□□□□ -1.43
ATXN3-247ENST00000557311 NIF3L1Q9GZT8 377 aa6.1□□□□□ -1.43
ATXN3-247ENST00000557311 CHRDQ9H2X0 955 aa6.1□□□□□ -1.43
ATXN3-247ENST00000557311 MYH16Q9H6N6 1097 aa6.1□□□□□ -1.43
ATXN3-247ENST00000557311 PAK6Q9NQU5 681 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-247ENST00000557311 TMOD2Q9NZR1 351 aa6.1□□□□□ -1.43
ATXN3-247ENST00000557311 SALL4Q9UJQ4 1053 aa6.1□□□□□ -1.43
ATXN3-247ENST00000557311 RBBP6Q7Z6E9 1792 aaKnown RBP6.09□□□□□ -1.43
ATXN3-247ENST00000557311 ADGRA2Q96PE1 1338 aa6.09□□□□□ -1.43
ATXN3-247ENST00000557311 PATL2C9JE40 543 aaKnown RBP6.09□□□□□ -1.43
ATXN3-247ENST00000557311 GYG1P46976 350 aa6.09□□□□□ -1.43
ATXN3-247ENST00000557311 CACNB3P54284 484 aa6.09□□□□□ -1.43
ATXN3-247ENST00000557311 FOXO4P98177 505 aa6.09□□□□□ -1.43
ATXN3-247ENST00000557311 MOGSQ13724 837 aa6.09□□□□□ -1.43
ATXN3-247ENST00000557311 CCDC57Q2TAC2 916 aa6.09□□□□□ -1.43
ATXN3-247ENST00000557311 FAM109BQ6ICB4 259 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-247ENST00000557311 APOBEC3HQ6NTF7 200 aaKnown RBP6.09□□□□□ -1.43
ATXN3-247ENST00000557311 FASTKD5Q7L8L6 764 aaKnown RBP6.09□□□□□ -1.43
ATXN3-247ENST00000557311 FBXO33Q7Z6M2 555 aa6.09□□□□□ -1.43
ATXN3-247ENST00000557311 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.09□□□□□ -1.43
ATXN3-247ENST00000557311 TDHQ8IZJ6 230 aa6.09□□□□□ -1.43
ATXN3-247ENST00000557311 LINS1Q8NG48 757 aa6.09□□□□□ -1.43
ATXN3-247ENST00000557311 TEKT1Q969V4 418 aa6.09□□□□□ -1.43
ATXN3-247ENST00000557311 ZDHHC15Q96MV8 337 aa6.09□□□□□ -1.43
ATXN3-247ENST00000557311 ZKSCAN3Q9BRR0 538 aa6.09□□□□□ -1.43
ATXN3-247ENST00000557311 CNNM1Q9NRU3 951 aa6.09□□□□□ -1.43
ATXN3-247ENST00000557311 DZANK1Q9NVP4 752 aa6.09□□□□□ -1.43
ATXN3-247ENST00000557311 ZNF112Q9UJU3 913 aa6.09□□□□□ -1.43
ATXN3-247ENST00000557311 ZMYND8Q9ULU4 1186 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-247ENST00000557311 GABRQQ9UN88 632 aa6.09□□□□□ -1.43
ATXN3-247ENST00000557311 BRCA2P51587 3418 aa6.09□□□□□ -1.44
ATXN3-247ENST00000557311 TNPO2O14787 897 aaKnown RBP6.08□□□□□ -1.44
ATXN3-247ENST00000557311 CPNE3O75131 537 aaKnown RBP6.08□□□□□ -1.44
ATXN3-247ENST00000557311 GADD45BO75293 160 aaPredicted RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms