RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 CXCL10P02778 98 aa14.89□□□□□ -0.03
PSEN1-221ENST00000557293 GNAT2P19087 354 aa14.89□□□□□ -0.03
PSEN1-221ENST00000557293 EDNRBP24530 442 aa14.89□□□□□ -0.03
PSEN1-221ENST00000557293 LRRFIP1Q32MZ4 808 aaKnown RBP14.89□□□□□ -0.03
PSEN1-221ENST00000557293 BTNL9Q6UXG8 535 aa14.89□□□□□ -0.03
PSEN1-221ENST00000557293 RANBP17Q9H2T7 1088 aaKnown RBP14.89□□□□□ -0.03
PSEN1-221ENST00000557293 ADD3Q9UEY8 706 aaKnown RBP14.89□□□□□ -0.03
PSEN1-221ENST00000557293 ISY1Q9ULR0 285 aaKnown RBP14.89□□□□□ -0.03
PSEN1-221ENST00000557293 TANC1Q9C0D5 1861 aa14.89□□□□□ -0.03
PSEN1-221ENST00000557293 GRXCR2A6NFK2 248 aa14.88□□□□□ -0.03
PSEN1-221ENST00000557293 NKRFO15226 690 aaKnown RBP eCLIP14.88□□□□□ -0.03
PSEN1-221ENST00000557293 FOXP2O15409 715 aa14.88□□□□□ -0.03
PSEN1-221ENST00000557293 NBNO60934 754 aa14.88□□□□□ -0.03
PSEN1-221ENST00000557293 ARIH2O95376 493 aa14.88□□□□□ -0.03
PSEN1-221ENST00000557293 GJB5O95377 273 aa14.88□□□□□ -0.03
PSEN1-221ENST00000557293 APPP05067 770 aa14.88□□□□□ -0.03
PSEN1-221ENST00000557293 SLC16A2P36021 539 aa14.88□□□□□ -0.03
PSEN1-221ENST00000557293 NHLH1Q02575 133 aa14.88□□□□□ -0.03
PSEN1-221ENST00000557293 RBL2Q08999 1139 aa14.88□□□□□ -0.03
PSEN1-221ENST00000557293 GDF6Q6KF10 455 aaPredicted RBP14.88□□□□□ -0.03
PSEN1-221ENST00000557293 TRAF7Q6Q0C0 670 aa14.88□□□□□ -0.03
PSEN1-221ENST00000557293 SLC30A10Q6XR72 485 aa14.88□□□□□ -0.03
PSEN1-221ENST00000557293 KAT2BQ92831 832 aa14.88□□□□□ -0.03
PSEN1-221ENST00000557293 TGS1Q96RS0 853 aaKnown RBP14.88□□□□□ -0.03
PSEN1-221ENST00000557293 RAD9AQ99638 391 aa14.88□□□□□ -0.03
PSEN1-221ENST00000557293 ECHDC1Q9NTX5 307 aa14.88□□□□□ -0.03
PSEN1-221ENST00000557293 KCNA5P22460 613 aa14.87□□□□□ -0.03
PSEN1-221ENST00000557293 KCNJ6P48051 423 aa14.87□□□□□ -0.03
PSEN1-221ENST00000557293 PDE4BQ07343 736 aa14.87□□□□□ -0.03
PSEN1-221ENST00000557293 PPARAQ07869 468 aa14.87□□□□□ -0.03
PSEN1-221ENST00000557293 PTGISQ16647 500 aa14.87□□□□□ -0.03
PSEN1-221ENST00000557293 CCDC62Q6P9F0 684 aa14.87□□□□□ -0.03
PSEN1-221ENST00000557293 SESTD1Q86VW0 696 aa14.87□□□□□ -0.03
PSEN1-221ENST00000557293 NEK9Q8TD19 979 aa14.87□□□□□ -0.03
PSEN1-221ENST00000557293 AFAP1L1Q8TED9 768 aa14.87□□□□□ -0.03
PSEN1-221ENST00000557293 FBXL18Q96ME1 805 aa14.87□□□□□ -0.03
PSEN1-221ENST00000557293 ZBED2Q9BTP6 218 aa14.87□□□□□ -0.03
PSEN1-221ENST00000557293 LRRCC1Q9C099 1032 aa14.87□□□□□ -0.03
PSEN1-221ENST00000557293 MTUS1Q9ULD2 1270 aa14.87□□□□□ -0.03
PSEN1-221ENST00000557293 ZFYP08048 801 aaPredicted RBP14.86□□□□□ -0.03
PSEN1-221ENST00000557293 TXNP10599 105 aaKnown RBP14.86□□□□□ -0.03
PSEN1-221ENST00000557293 SELPP16109 830 aa14.86□□□□□ -0.03
PSEN1-221ENST00000557293 TSHZ3Q63HK5 1081 aa14.86□□□□□ -0.03
PSEN1-221ENST00000557293 PTCRAQ6ISU1 281 aaPredicted RBP14.86□□□□□ -0.03
PSEN1-221ENST00000557293 CNKSR3Q6P9H4 555 aa14.86□□□□□ -0.03
PSEN1-221ENST00000557293 CAGE1Q8TC20 777 aa14.86□□□□□ -0.03
PSEN1-221ENST00000557293 SCFD2Q8WU76 684 aa14.86□□□□□ -0.03
PSEN1-221ENST00000557293 ANKS1AQ92625 1134 aa14.86□□□□□ -0.03
PSEN1-221ENST00000557293 ABHD14A-ACY1A0A1B0GW23 586 aa14.85□□□□□ -0.03
PSEN1-221ENST00000557293 PTPDC1A2A3K4 754 aa14.85□□□□□ -0.03
PSEN1-221ENST00000557293 CKBP12277 381 aa14.85□□□□□ -0.03
PSEN1-221ENST00000557293 ALADP13716 330 aa14.85□□□□□ -0.03
PSEN1-221ENST00000557293 CTDSPL2Q05D32 466 aa14.85□□□□□ -0.03
PSEN1-221ENST00000557293 MKRN4PQ13434 485 aaPredicted RBP14.85□□□□□ -0.03
PSEN1-221ENST00000557293 MBTPS1Q14703 1052 aa14.85□□□□□ -0.03
PSEN1-221ENST00000557293 PPP2R5BQ15173 497 aa14.85□□□□□ -0.03
PSEN1-221ENST00000557293 TRIM71Q2Q1W2 868 aaKnown RBP14.85□□□□□ -0.03
PSEN1-221ENST00000557293 BRDTQ58F21 947 aaPredicted RBP14.85□□□□□ -0.03
PSEN1-221ENST00000557293 LRRC8DQ7L1W4 858 aa14.85□□□□□ -0.03
PSEN1-221ENST00000557293 C17orf80Q9BSJ5 609 aa14.85□□□□□ -0.03
PSEN1-221ENST00000557293 STX8Q9UNK0 236 aa14.85□□□□□ -0.03
PSEN1-221ENST00000557293 C19orf67A6NJJ6 358 aa14.84□□□□□ -0.03
PSEN1-221ENST00000557293 CALML3P27482 149 aa14.84□□□□□ -0.03
PSEN1-221ENST00000557293 SSTR3P32745 418 aaPredicted RBP14.84□□□□□ -0.03
PSEN1-221ENST00000557293 RPS6P62753 249 aaKnown RBP14.84□□□□□ -0.03
PSEN1-221ENST00000557293 PDE4DQ08499 809 aa14.84□□□□□ -0.03
PSEN1-221ENST00000557293 SYDE2Q5VT97 1194 aa14.84□□□□□ -0.03
PSEN1-221ENST00000557293 DCAF4Q8WV16 495 aa14.84□□□□□ -0.03
PSEN1-221ENST00000557293 AFG1LQ8WV93 481 aa14.84□□□□□ -0.03
PSEN1-221ENST00000557293 WNT8BQ93098 351 aa14.84□□□□□ -0.03
PSEN1-221ENST00000557293 UIMC1Q96RL1 719 aa14.84□□□□□ -0.03
PSEN1-221ENST00000557293 DDX19BQ9UMR2 479 aa14.84□□□□□ -0.03
PSEN1-221ENST00000557293 MTMR7Q9Y216 660 aa14.84□□□□□ -0.03
PSEN1-221ENST00000557293 NOD1Q9Y239 953 aa14.84□□□□□ -0.03
PSEN1-221ENST00000557293 FGRP09769 529 aa14.83□□□□□ -0.04
PSEN1-221ENST00000557293 CHMP4BP1P59074 171 aa14.83□□□□□ -0.04
PSEN1-221ENST00000557293 HTRA4P83105 476 aaPredicted RBP14.83□□□□□ -0.04
PSEN1-221ENST00000557293 COL19A1Q14993 1142 aa14.83□□□□□ -0.04
PSEN1-221ENST00000557293 ZMYM1Q5SVZ6 1142 aa14.83□□□□□ -0.04
PSEN1-221ENST00000557293 FAM117BQ6P1L5 589 aa14.83□□□□□ -0.04
PSEN1-221ENST00000557293 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.83□□□□□ -0.04
PSEN1-221ENST00000557293 RNF207Q6ZRF8 634 aa14.83□□□□□ -0.04
PSEN1-221ENST00000557293 DNERQ8NFT8 737 aa14.83□□□□□ -0.04
PSEN1-221ENST00000557293 TBC1D5Q92609 795 aa14.83□□□□□ -0.04
PSEN1-221ENST00000557293 GPCPD1Q9NPB8 672 aa14.83□□□□□ -0.04
PSEN1-221ENST00000557293 HDAC6Q9UBN7 1215 aa14.83□□□□□ -0.04
PSEN1-221ENST00000557293 SIP14410 1827 aa14.82□□□□□ -0.04
PSEN1-221ENST00000557293 TSPY2A6NKD2 308 aa14.82□□□□□ -0.04
PSEN1-221ENST00000557293 H3BQ06 376 aaPredicted RBP14.82□□□□□ -0.04
PSEN1-221ENST00000557293 DCXO43602 365 aa14.82□□□□□ -0.04
PSEN1-221ENST00000557293 PARNO95453 639 aaKnown RBP14.82□□□□□ -0.04
PSEN1-221ENST00000557293 MMP3P08254 477 aa14.82□□□□□ -0.04
PSEN1-221ENST00000557293 ARHGAP1Q07960 439 aa14.82□□□□□ -0.04
PSEN1-221ENST00000557293 HIC1Q14526 733 aa14.82□□□□□ -0.04
PSEN1-221ENST00000557293 LY6KQ17RY6 165 aa14.82□□□□□ -0.04
PSEN1-221ENST00000557293 CCDC96Q2M329 555 aa14.82□□□□□ -0.04
PSEN1-221ENST00000557293 PPP4R3BQ5MIZ7 849 aa14.82□□□□□ -0.04
PSEN1-221ENST00000557293 ZNF618Q5T7W0 954 aa14.82□□□□□ -0.04
PSEN1-221ENST00000557293 CCDC155Q8N6L0 562 aa14.82□□□□□ -0.04
PSEN1-221ENST00000557293 FBXO22Q8NEZ5 403 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms