RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 TBX10O75333 385 aa15.02■□□□□ -0
PSEN1-220ENST00000557037 CSPG5O95196 566 aa15.02■□□□□ -0
PSEN1-220ENST00000557037 GTF2F1P35269 517 aaKnown RBP eCLIP15.02■□□□□ -0
PSEN1-220ENST00000557037 PTPN11Q06124 597 aaPredicted RBP15.02■□□□□ -0
PSEN1-220ENST00000557037 SIGLEC14Q08ET2 396 aa15.02■□□□□ -0
PSEN1-220ENST00000557037 HYAL1Q12794 435 aa15.02■□□□□ -0
PSEN1-220ENST00000557037 CTC1Q2NKJ3 1217 aa15.02■□□□□ -0
PSEN1-220ENST00000557037 TMED8Q6PL24 325 aaPredicted RBP15.02■□□□□ -0
PSEN1-220ENST00000557037 TMEM192Q8IY95 271 aa15.02■□□□□ -0
PSEN1-220ENST00000557037 ADSSL1Q8N142 457 aa15.02■□□□□ -0
PSEN1-220ENST00000557037 CTAGE1Q96RT6 745 aa15.02■□□□□ -0
PSEN1-220ENST00000557037 IGFLR1Q9H665 355 aa15.02■□□□□ -0
PSEN1-220ENST00000557037 CD207Q9UJ71 328 aa15.02■□□□□ -0
PSEN1-220ENST00000557037 ATRXP46100 2492 aa15.01□□□□□ -0.01
PSEN1-220ENST00000557037 LINC01565O15544 149 aa15.01□□□□□ -0.01
PSEN1-220ENST00000557037 EFCAB14O75071 495 aa15.01□□□□□ -0.01
PSEN1-220ENST00000557037 PDGFBP01127 241 aaPredicted RBP15.01□□□□□ -0.01
PSEN1-220ENST00000557037 GNAI2P04899 355 aa15.01□□□□□ -0.01
PSEN1-220ENST00000557037 ALAS1P13196 640 aa15.01□□□□□ -0.01
PSEN1-220ENST00000557037 BRDTQ58F21 947 aaPredicted RBP15.01□□□□□ -0.01
PSEN1-220ENST00000557037 GDF6Q6KF10 455 aaPredicted RBP15.01□□□□□ -0.01
PSEN1-220ENST00000557037 SP7Q8TDD2 431 aaPredicted RBP15.01□□□□□ -0.01
PSEN1-220ENST00000557037 EAF2Q96CJ1 260 aaPredicted RBP15.01□□□□□ -0.01
PSEN1-220ENST00000557037 ASIC4Q96FT7 647 aa15.01□□□□□ -0.01
PSEN1-220ENST00000557037 SAMD11Q96NU1 681 aa15.01□□□□□ -0.01
PSEN1-220ENST00000557037 TRERF1Q96PN7 1200 aa15.01□□□□□ -0.01
PSEN1-220ENST00000557037 FEM1BQ9UK73 627 aa15.01□□□□□ -0.01
PSEN1-220ENST00000557037 ISY1Q9ULR0 285 aaKnown RBP15.01□□□□□ -0.01
PSEN1-220ENST00000557037 MICAL3Q7RTP6 2002 aa15□□□□□ -0.01
PSEN1-220ENST00000557037 GALR2O43603 387 aaPredicted RBP15□□□□□ -0.01
PSEN1-220ENST00000557037 SURF6O75683 361 aaKnown RBP15□□□□□ -0.01
PSEN1-220ENST00000557037 HTRA4P83105 476 aaPredicted RBP15□□□□□ -0.01
PSEN1-220ENST00000557037 FRMD5Q7Z6J6 570 aa15□□□□□ -0.01
PSEN1-220ENST00000557037 STK11IPQ8N1F8 1099 aa15□□□□□ -0.01
PSEN1-220ENST00000557037 COPS5Q92905 334 aa15□□□□□ -0.01
PSEN1-220ENST00000557037 CHMP4CQ96CF2 233 aa15□□□□□ -0.01
PSEN1-220ENST00000557037 CLIP2Q9UDT6 1046 aa15□□□□□ -0.01
PSEN1-220ENST00000557037 VPS13AQ96RL7 3174 aa15□□□□□ -0.01
PSEN1-220ENST00000557037 LOC730098B7Z3J9 87 aa14.99□□□□□ -0.01
PSEN1-220ENST00000557037 MBD4O95243 580 aa14.99□□□□□ -0.01
PSEN1-220ENST00000557037 AMHP03971 560 aa14.99□□□□□ -0.01
PSEN1-220ENST00000557037 CKBP12277 381 aa14.99□□□□□ -0.01
PSEN1-220ENST00000557037 NBL1P41271 181 aa14.99□□□□□ -0.01
PSEN1-220ENST00000557037 SNAP25P60880 206 aa14.99□□□□□ -0.01
PSEN1-220ENST00000557037 SLFNL1Q499Z3 407 aa14.99□□□□□ -0.01
PSEN1-220ENST00000557037 MUM1L1Q5H9M0 696 aa14.99□□□□□ -0.01
PSEN1-220ENST00000557037 NSMFQ6X4W1 530 aa14.99□□□□□ -0.01
PSEN1-220ENST00000557037 FBXO11Q86XK2 927 aa14.99□□□□□ -0.01
PSEN1-220ENST00000557037 AMOTL1Q8IY63 956 aa14.99□□□□□ -0.01
PSEN1-220ENST00000557037 CNTNAP3BQ96NU0 1288 aa14.99□□□□□ -0.01
PSEN1-220ENST00000557037 YME1L1Q96TA2 773 aa14.99□□□□□ -0.01
PSEN1-220ENST00000557037 CNTNAP3Q9BZ76 1288 aa14.99□□□□□ -0.01
PSEN1-220ENST00000557037 CYP39A1Q9NYL5 469 aa14.99□□□□□ -0.01
PSEN1-220ENST00000557037 NYAP2Q9P242 653 aa14.99□□□□□ -0.01
PSEN1-220ENST00000557037 ATG2AQ2TAZ0 1938 aa14.98□□□□□ -0.01
PSEN1-220ENST00000557037 DMDP11532 3685 aa14.98□□□□□ -0.01
PSEN1-220ENST00000557037 TCRBV5S4A2TA0A5A2 114 aa14.98□□□□□ -0.01
PSEN1-220ENST00000557037 KPNA6O60684 536 aa14.98□□□□□ -0.01
PSEN1-220ENST00000557037 BCAR3O75815 825 aa14.98□□□□□ -0.01
PSEN1-220ENST00000557037 MBTPS1Q14703 1052 aa14.98□□□□□ -0.01
PSEN1-220ENST00000557037 MORC4Q8TE76 937 aa14.98□□□□□ -0.01
PSEN1-220ENST00000557037 NKD2Q969F2 451 aaPredicted RBP14.98□□□□□ -0.01
PSEN1-220ENST00000557037 ATP8A2Q9NTI2 1148 aa14.98□□□□□ -0.01
PSEN1-220ENST00000557037 MAP1BP46821 2468 aaKnown RBP14.98□□□□□ -0.01
PSEN1-220ENST00000557037 RAD50Q92878 1312 aa14.97□□□□□ -0.01
PSEN1-220ENST00000557037 A6NJR5 290 aa14.97□□□□□ -0.01
PSEN1-220ENST00000557037 TMEM232C9JQI7 657 aa14.97□□□□□ -0.01
PSEN1-220ENST00000557037 UPP2O95045 317 aa14.97□□□□□ -0.01
PSEN1-220ENST00000557037 PARNO95453 639 aaKnown RBP14.97□□□□□ -0.01
PSEN1-220ENST00000557037 DGLUCYQ7Z3D6 616 aa14.97□□□□□ -0.01
PSEN1-220ENST00000557037 LRRC47Q8N1G4 583 aaKnown RBP14.97□□□□□ -0.01
PSEN1-220ENST00000557037 RMDN1Q96DB5 314 aa14.97□□□□□ -0.01
PSEN1-220ENST00000557037 RPGRIP1Q96KN7 1286 aa14.97□□□□□ -0.01
PSEN1-220ENST00000557037 INCENPQ9NQS7 918 aa14.97□□□□□ -0.01
PSEN1-220ENST00000557037 LCTP09848 1927 aa14.97□□□□□ -0.01
PSEN1-220ENST00000557037 NLRC5Q86WI3 1866 aa14.97□□□□□ -0.01
PSEN1-220ENST00000557037 RBM47A0AV96 593 aaKnown RBP14.96□□□□□ -0.01
PSEN1-220ENST00000557037 GRM6O15303 877 aa14.96□□□□□ -0.01
PSEN1-220ENST00000557037 LGR5O75473 907 aa14.96□□□□□ -0.01
PSEN1-220ENST00000557037 CTNNB1P35222 781 aa14.96□□□□□ -0.01
PSEN1-220ENST00000557037 NDUFV1P49821 464 aa14.96□□□□□ -0.01
PSEN1-220ENST00000557037 POLA2Q14181 598 aa14.96□□□□□ -0.01
PSEN1-220ENST00000557037 CBX2Q14781 532 aaPredicted RBP14.96□□□□□ -0.01
PSEN1-220ENST00000557037 PPP2R5BQ15173 497 aa14.96□□□□□ -0.01
PSEN1-220ENST00000557037 TKFCQ3LXA3 575 aa14.96□□□□□ -0.01
PSEN1-220ENST00000557037 TRAF7Q6Q0C0 670 aa14.96□□□□□ -0.01
PSEN1-220ENST00000557037 FAM9BQ8IZU0 186 aa14.96□□□□□ -0.01
PSEN1-220ENST00000557037 DMXL1Q9Y485 3027 aa14.96□□□□□ -0.01
PSEN1-220ENST00000557037 BMP3P12645 472 aa14.95□□□□□ -0.02
PSEN1-220ENST00000557037 RASA1P20936 1047 aa14.95□□□□□ -0.02
PSEN1-220ENST00000557037 RRP1P56182 461 aaKnown RBP14.95□□□□□ -0.02
PSEN1-220ENST00000557037 RBL2Q08999 1139 aa14.95□□□□□ -0.02
PSEN1-220ENST00000557037 IKQ13123 557 aaPredicted RBP14.95□□□□□ -0.02
PSEN1-220ENST00000557037 ADAM15Q13444 863 aa14.95□□□□□ -0.02
PSEN1-220ENST00000557037 TTF1Q15361 905 aaPredicted RBP14.95□□□□□ -0.02
PSEN1-220ENST00000557037 ZNF618Q5T7W0 954 aa14.95□□□□□ -0.02
PSEN1-220ENST00000557037 SLFN13Q68D06 897 aa14.95□□□□□ -0.02
PSEN1-220ENST00000557037 CTR9Q6PD62 1173 aa14.95□□□□□ -0.02
PSEN1-220ENST00000557037 DBF4BQ8NFT6 615 aa14.95□□□□□ -0.02
PSEN1-220ENST00000557037 WNT8BQ93098 351 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms