RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 V9GYY5 206 aaPredicted RBP11.36□□□□□ -0.59
TMEM260-211ENST00000556648 COL2A1P02458 1487 aaPredicted RBP11.35□□□□□ -0.59
TMEM260-211ENST00000556648 NKRFO15226 690 aaKnown RBP eCLIP11.35□□□□□ -0.59
TMEM260-211ENST00000556648 STX10O60499 249 aa11.35□□□□□ -0.59
TMEM260-211ENST00000556648 PPP4R3BQ5MIZ7 849 aa11.35□□□□□ -0.59
TMEM260-211ENST00000556648 RBM26Q5T8P6 1007 aaKnown RBP11.35□□□□□ -0.59
TMEM260-211ENST00000556648 ANKRD40Q6AI12 368 aa11.35□□□□□ -0.59
TMEM260-211ENST00000556648 PPP4R3AQ6IN85 833 aa11.35□□□□□ -0.59
TMEM260-211ENST00000556648 DYMQ7RTS9 669 aa11.35□□□□□ -0.59
TMEM260-211ENST00000556648 PPFIBP1Q86W92 1011 aa11.35□□□□□ -0.59
TMEM260-211ENST00000556648 FCHSD1Q86WN1 690 aa11.35□□□□□ -0.59
TMEM260-211ENST00000556648 TTLL6Q8N841 843 aa11.35□□□□□ -0.59
TMEM260-211ENST00000556648 GMCL1P1Q8NEA9 526 aa11.35□□□□□ -0.59
TMEM260-211ENST00000556648 ACER1Q8TDN7 264 aa11.35□□□□□ -0.59
TMEM260-211ENST00000556648 RAD54LQ92698 747 aa11.35□□□□□ -0.59
TMEM260-211ENST00000556648 GMLQ99445 158 aa11.35□□□□□ -0.59
TMEM260-211ENST00000556648 SRRTQ9BXP5 876 aaKnown RBP11.35□□□□□ -0.59
TMEM260-211ENST00000556648 MRPL44Q9H9J2 332 aaKnown RBP11.35□□□□□ -0.59
TMEM260-211ENST00000556648 SLC39A2Q9NP94 309 aa11.35□□□□□ -0.59
TMEM260-211ENST00000556648 ZNF70Q9UC06 446 aaPredicted RBP11.35□□□□□ -0.59
TMEM260-211ENST00000556648 ZNF215Q9UL58 517 aaPredicted RBP11.35□□□□□ -0.59
TMEM260-211ENST00000556648 ITIH6Q6UXX5 1313 aa11.35□□□□□ -0.59
TMEM260-211ENST00000556648 LRRC10BA6NIK2 292 aa11.35□□□□□ -0.59
TMEM260-211ENST00000556648 H7C1D1 291 aa11.35□□□□□ -0.59
TMEM260-211ENST00000556648 MEIS2O14770 477 aa11.35□□□□□ -0.59
TMEM260-211ENST00000556648 PSMA7O14818 248 aa11.35□□□□□ -0.59
TMEM260-211ENST00000556648 STAT3P40763 770 aa11.35□□□□□ -0.59
TMEM260-211ENST00000556648 SPAG1Q07617 926 aa11.35□□□□□ -0.59
TMEM260-211ENST00000556648 IKQ13123 557 aaPredicted RBP11.35□□□□□ -0.59
TMEM260-211ENST00000556648 SYDE2Q5VT97 1194 aa11.35□□□□□ -0.59
TMEM260-211ENST00000556648 LARGE2Q8N3Y3 721 aa11.35□□□□□ -0.59
TMEM260-211ENST00000556648 GLIS3Q8NEA6 775 aa11.35□□□□□ -0.59
TMEM260-211ENST00000556648 ANKRD7Q92527 254 aa11.35□□□□□ -0.59
TMEM260-211ENST00000556648 LARP4BQ92615 738 aaKnown RBP11.35□□□□□ -0.59
TMEM260-211ENST00000556648 P2RX5Q93086 422 aa11.35□□□□□ -0.59
TMEM260-211ENST00000556648 GMCL1Q96IK5 515 aa11.35□□□□□ -0.59
TMEM260-211ENST00000556648 PANX2Q96RD6 677 aa11.35□□□□□ -0.59
TMEM260-211ENST00000556648 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.35□□□□□ -0.59
TMEM260-211ENST00000556648 DNAI1Q9UI46 699 aa11.35□□□□□ -0.59
TMEM260-211ENST00000556648 SCAF8Q9UPN6 1271 aaKnown RBP11.35□□□□□ -0.59
TMEM260-211ENST00000556648 SHTN1A0MZ66 631 aa11.34□□□□□ -0.59
TMEM260-211ENST00000556648 KIF2AO00139 706 aaPredicted RBP11.34□□□□□ -0.59
TMEM260-211ENST00000556648 OPLAHO14841 1288 aa11.34□□□□□ -0.59
TMEM260-211ENST00000556648 SV2BQ7L1I2 683 aa11.34□□□□□ -0.59
TMEM260-211ENST00000556648 STK17AQ9UEE5 414 aa11.34□□□□□ -0.59
TMEM260-211ENST00000556648 SMCHD1A6NHR9 2005 aa11.34□□□□□ -0.59
TMEM260-211ENST00000556648 B4DLN1 442 aa11.33□□□□□ -0.6
TMEM260-211ENST00000556648 VIL1P09327 827 aaKnown RBP11.33□□□□□ -0.6
TMEM260-211ENST00000556648 BMP3P12645 472 aa11.33□□□□□ -0.6
TMEM260-211ENST00000556648 CCNE1P24864 410 aa11.33□□□□□ -0.6
TMEM260-211ENST00000556648 ETF1P62495 437 aaKnown RBP11.33□□□□□ -0.6
TMEM260-211ENST00000556648 ERVK-24P63145 666 aa11.33□□□□□ -0.6
TMEM260-211ENST00000556648 UBXN1Q04323 297 aa11.33□□□□□ -0.6
TMEM260-211ENST00000556648 STIM1Q13586 685 aa11.33□□□□□ -0.6
TMEM260-211ENST00000556648 DHTKD1Q96HY7 919 aaPredicted RBP11.33□□□□□ -0.6
TMEM260-211ENST00000556648 CDK5RAP3Q96JB5 506 aa11.33□□□□□ -0.6
TMEM260-211ENST00000556648 WDR24Q96S15 920 aa11.33□□□□□ -0.6
TMEM260-211ENST00000556648 PSMD1Q99460 953 aa11.33□□□□□ -0.6
TMEM260-211ENST00000556648 SEMA6BQ9H3T3 888 aa11.33□□□□□ -0.6
TMEM260-211ENST00000556648 THAP9Q9H5L6 903 aa11.33□□□□□ -0.6
TMEM260-211ENST00000556648 VEZTQ9HBM0 779 aa11.33□□□□□ -0.6
TMEM260-211ENST00000556648 LGALS16A8MUM7 142 aa11.33□□□□□ -0.6
TMEM260-211ENST00000556648 CCP110O43303 1012 aa11.33□□□□□ -0.6
TMEM260-211ENST00000556648 HOXA13P31271 388 aaPredicted RBP11.33□□□□□ -0.6
TMEM260-211ENST00000556648 KLK7P49862 253 aa11.33□□□□□ -0.6
TMEM260-211ENST00000556648 PDIA5Q14554 519 aa11.33□□□□□ -0.6
TMEM260-211ENST00000556648 DLGAP5Q15398 846 aa11.33□□□□□ -0.6
TMEM260-211ENST00000556648 KRT79Q5XKE5 535 aa11.33□□□□□ -0.6
TMEM260-211ENST00000556648 CCDC84Q86UT8 332 aaPredicted RBP11.33□□□□□ -0.6
TMEM260-211ENST00000556648 FBXO11Q86XK2 927 aa11.33□□□□□ -0.6
TMEM260-211ENST00000556648 CSGALNACT2Q8N6G5 542 aa11.33□□□□□ -0.6
TMEM260-211ENST00000556648 AMNQ9BXJ7 453 aa11.33□□□□□ -0.6
TMEM260-211ENST00000556648 FGFBP2Q9BYJ0 223 aa11.33□□□□□ -0.6
TMEM260-211ENST00000556648 TMEM39BQ9GZU3 492 aa11.33□□□□□ -0.6
TMEM260-211ENST00000556648 PRR12Q9ULL5 1215 aa11.33□□□□□ -0.6
TMEM260-211ENST00000556648 KIF13BQ9NQT8 1826 aa11.33□□□□□ -0.6
TMEM260-211ENST00000556648 PHLPP2Q6ZVD8 1323 aa11.32□□□□□ -0.6
TMEM260-211ENST00000556648 GOLGB1Q14789 3259 aaKnown RBP11.32□□□□□ -0.6
TMEM260-211ENST00000556648 ZSCAN12O43309 604 aa11.32□□□□□ -0.6
TMEM260-211ENST00000556648 MARCH6O60337 910 aa11.32□□□□□ -0.6
TMEM260-211ENST00000556648 GCFC2P16383 781 aaKnown RBP11.32□□□□□ -0.6
TMEM260-211ENST00000556648 ARHGAP4P98171 946 aa11.32□□□□□ -0.6
TMEM260-211ENST00000556648 AMPD3Q01432 767 aa11.32□□□□□ -0.6
TMEM260-211ENST00000556648 LRRC41Q15345 812 aa11.32□□□□□ -0.6
TMEM260-211ENST00000556648 ZYXQ15942 572 aaKnown RBP11.32□□□□□ -0.6
TMEM260-211ENST00000556648 SPDYE2Q495Y8 402 aa11.32□□□□□ -0.6
TMEM260-211ENST00000556648 FAM83BQ5T0W9 1011 aa11.32□□□□□ -0.6
TMEM260-211ENST00000556648 UNC13DQ70J99 1090 aa11.32□□□□□ -0.6
TMEM260-211ENST00000556648 RTKN2Q8IZC4 609 aa11.32□□□□□ -0.6
TMEM260-211ENST00000556648 MB21D1Q8N884 522 aa11.32□□□□□ -0.6
TMEM260-211ENST00000556648 ACRBPQ8NEB7 543 aa11.32□□□□□ -0.6
TMEM260-211ENST00000556648 ANKRD20A12PQ8NF67 263 aa11.32□□□□□ -0.6
TMEM260-211ENST00000556648 ZNF507Q8TCN5 953 aa11.32□□□□□ -0.6
TMEM260-211ENST00000556648 CRYGNQ8WXF5 182 aa11.32□□□□□ -0.6
TMEM260-211ENST00000556648 DDX12PQ92771 950 aa11.32□□□□□ -0.6
TMEM260-211ENST00000556648 CCDC47Q96A33 483 aaKnown RBP11.32□□□□□ -0.6
TMEM260-211ENST00000556648 CNOT6LQ96LI5 555 aaKnown RBP11.32□□□□□ -0.6
TMEM260-211ENST00000556648 L2HGDHQ9H9P8 463 aa11.32□□□□□ -0.6
TMEM260-211ENST00000556648 KCNMB3Q9NPA1 279 aa11.32□□□□□ -0.6
TMEM260-211ENST00000556648 ABHD10Q9NUJ1 306 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms