RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 PNMA5Q96PV4 448 aa20.59■□□□□ 0.89
SDR39U1-220ENST00000556548 SH2D4AQ9H788 454 aa20.59■□□□□ 0.89
SDR39U1-220ENST00000556548 RMND1Q9NWS8 449 aa20.59■□□□□ 0.89
SDR39U1-220ENST00000556548 CFBP00751 764 aa20.59■□□□□ 0.89
SDR39U1-220ENST00000556548 ZNF658Q5TYW1 1059 aaPredicted RBP20.59■□□□□ 0.89
SDR39U1-220ENST00000556548 RAB34Q9BZG1 259 aa20.59■□□□□ 0.89
SDR39U1-220ENST00000556548 PCDHA12Q9UN75 941 aa20.59■□□□□ 0.89
SDR39U1-220ENST00000556548 SMCHD1A6NHR9 2005 aa20.58■□□□□ 0.89
SDR39U1-220ENST00000556548 KLRC4O43908 158 aa20.58■□□□□ 0.89
SDR39U1-220ENST00000556548 GCFC2P16383 781 aaKnown RBP20.58■□□□□ 0.89
SDR39U1-220ENST00000556548 INPP5BP32019 993 aa20.58■□□□□ 0.89
SDR39U1-220ENST00000556548 AP3B2Q13367 1082 aa20.58■□□□□ 0.89
SDR39U1-220ENST00000556548 PRR16Q569H4 304 aa20.58■□□□□ 0.89
SDR39U1-220ENST00000556548 ANGEL2Q5VTE6 544 aaKnown RBP20.58■□□□□ 0.89
SDR39U1-220ENST00000556548 SPATA1Q5VX52 437 aa20.58■□□□□ 0.89
SDR39U1-220ENST00000556548 TRPM4Q8TD43 1214 aa20.58■□□□□ 0.89
SDR39U1-220ENST00000556548 INTS13Q9NVM9 706 aa20.58■□□□□ 0.89
SDR39U1-220ENST00000556548 CBFA2T2O43439 604 aa20.58■□□□□ 0.88
SDR39U1-220ENST00000556548 PRCPP42785 496 aa20.58■□□□□ 0.88
SDR39U1-220ENST00000556548 USP11P51784 963 aa20.58■□□□□ 0.88
SDR39U1-220ENST00000556548 MCM6Q14566 821 aa20.58■□□□□ 0.88
SDR39U1-220ENST00000556548 ECM1Q16610 540 aa20.58■□□□□ 0.88
SDR39U1-220ENST00000556548 KRT79Q5XKE5 535 aa20.58■□□□□ 0.88
SDR39U1-220ENST00000556548 H7C1D1 291 aa20.57■□□□□ 0.88
SDR39U1-220ENST00000556548 OFD1O75665 1012 aa20.57■□□□□ 0.88
SDR39U1-220ENST00000556548 PDIA5Q14554 519 aa20.57■□□□□ 0.88
SDR39U1-220ENST00000556548 TPD52L1Q16890 204 aaPredicted RBP20.57■□□□□ 0.88
SDR39U1-220ENST00000556548 STAT3P40763 770 aa20.56■□□□□ 0.88
SDR39U1-220ENST00000556548 ASIC1P78348 528 aa20.56■□□□□ 0.88
SDR39U1-220ENST00000556548 DNTTIP2Q5QJE6 756 aaKnown RBP20.56■□□□□ 0.88
SDR39U1-220ENST00000556548 KCNK18Q7Z418 384 aa20.56■□□□□ 0.88
SDR39U1-220ENST00000556548 NELFBQ8WX92 580 aa20.56■□□□□ 0.88
SDR39U1-220ENST00000556548 TRIM9Q9C026 710 aa20.56■□□□□ 0.88
SDR39U1-220ENST00000556548 RANBP17Q9H2T7 1088 aaKnown RBP20.56■□□□□ 0.88
SDR39U1-220ENST00000556548 CUEDC2Q9H467 287 aa20.56■□□□□ 0.88
SDR39U1-220ENST00000556548 BLOC1S4Q9NUP1 217 aa20.56■□□□□ 0.88
SDR39U1-220ENST00000556548 CREBRFQ8IUR6 639 aa20.56■□□□□ 0.88
SDR39U1-220ENST00000556548 CYP2W1Q8TAV3 490 aa20.56■□□□□ 0.88
SDR39U1-220ENST00000556548 FEM1BQ9UK73 627 aa20.56■□□□□ 0.88
SDR39U1-220ENST00000556548 FAM86B1E9PN63 330 aa20.55■□□□□ 0.88
SDR39U1-220ENST00000556548 FAM86B2P0C5J1 330 aa20.55■□□□□ 0.88
SDR39U1-220ENST00000556548 MMP14P50281 582 aa20.55■□□□□ 0.88
SDR39U1-220ENST00000556548 UBXN2AP68543 259 aa20.55■□□□□ 0.88
SDR39U1-220ENST00000556548 GOLGA8FQ08AF8 430 aa20.55■□□□□ 0.88
SDR39U1-220ENST00000556548 GOLGA8DPQ0D2H9 430 aa20.55■□□□□ 0.88
SDR39U1-220ENST00000556548 PAK1Q13153 545 aa20.55■□□□□ 0.88
SDR39U1-220ENST00000556548 ARMCX5Q6P1M9 558 aa20.55■□□□□ 0.88
SDR39U1-220ENST00000556548 CRYGNQ8WXF5 182 aa20.55■□□□□ 0.88
SDR39U1-220ENST00000556548 HPS3Q969F9 1004 aa20.55■□□□□ 0.88
SDR39U1-220ENST00000556548 IMPACTQ9P2X3 320 aa20.55■□□□□ 0.88
SDR39U1-220ENST00000556548 A0A0U1RQG5 324 aaPredicted RBP20.55■□□□□ 0.88
SDR39U1-220ENST00000556548 SKILP12757 684 aa20.55■□□□□ 0.88
SDR39U1-220ENST00000556548 SV2BQ7L1I2 683 aa20.55■□□□□ 0.88
SDR39U1-220ENST00000556548 DYMQ7RTS9 669 aa20.55■□□□□ 0.88
SDR39U1-220ENST00000556548 ZKSCAN4Q969J2 545 aaPredicted RBP20.55■□□□□ 0.88
SDR39U1-220ENST00000556548 ZFP91Q96JP5 570 aaPredicted RBP20.55■□□□□ 0.88
SDR39U1-220ENST00000556548 AGBL1Q96MI9 1066 aa20.55■□□□□ 0.88
SDR39U1-220ENST00000556548 NAP1L4Q99733 375 aaKnown RBP20.55■□□□□ 0.88
SDR39U1-220ENST00000556548 CYP3A7-CYP3A51PA0A087WV96 503 aa20.54■□□□□ 0.88
SDR39U1-220ENST00000556548 TRIM49BA6NDI0 452 aa20.54■□□□□ 0.88
SDR39U1-220ENST00000556548 CYP3A7P24462 503 aa20.54■□□□□ 0.88
SDR39U1-220ENST00000556548 CT47A1Q5JQC4 288 aaPredicted RBP20.54■□□□□ 0.88
SDR39U1-220ENST00000556548 FAM160B2Q86V87 743 aa20.54■□□□□ 0.88
SDR39U1-220ENST00000556548 LARP4BQ92615 738 aaKnown RBP20.54■□□□□ 0.88
SDR39U1-220ENST00000556548 KCNMB3Q9NPA1 279 aa20.54■□□□□ 0.88
SDR39U1-220ENST00000556548 CTNND1O60716 968 aaKnown RBP20.54■□□□□ 0.88
SDR39U1-220ENST00000556548 FOSP01100 380 aaPredicted RBP20.54■□□□□ 0.88
SDR39U1-220ENST00000556548 ZNF76P36508 570 aa20.54■□□□□ 0.88
SDR39U1-220ENST00000556548 SREBF1P36956 1147 aa20.54■□□□□ 0.88
SDR39U1-220ENST00000556548 EPS15P42566 896 aa20.54■□□□□ 0.88
SDR39U1-220ENST00000556548 PDE4DQ08499 809 aa20.54■□□□□ 0.88
SDR39U1-220ENST00000556548 LDHDQ86WU2 507 aa20.54■□□□□ 0.88
SDR39U1-220ENST00000556548 VSTM4Q8IW00 320 aa20.54■□□□□ 0.88
SDR39U1-220ENST00000556548 C7orf25Q9BPX7 421 aa20.54■□□□□ 0.88
SDR39U1-220ENST00000556548 MAGEF1Q9HAY2 307 aa20.54■□□□□ 0.88
SDR39U1-220ENST00000556548 RWDD2AQ9UIY3 292 aa20.54■□□□□ 0.88
SDR39U1-220ENST00000556548 RHOBTB3O94955 611 aa20.53■□□□□ 0.88
SDR39U1-220ENST00000556548 MYL1P05976 194 aa20.53■□□□□ 0.88
SDR39U1-220ENST00000556548 FCER1AP12319 257 aa20.53■□□□□ 0.88
SDR39U1-220ENST00000556548 CCT6AP40227 531 aaKnown RBP20.53■□□□□ 0.88
SDR39U1-220ENST00000556548 GSDMDP57764 484 aa20.53■□□□□ 0.88
SDR39U1-220ENST00000556548 CCZ1BP86790 482 aa20.53■□□□□ 0.88
SDR39U1-220ENST00000556548 CCZ1P86791 482 aaPredicted RBP20.53■□□□□ 0.88
SDR39U1-220ENST00000556548 MTMR2Q13614 643 aa20.53■□□□□ 0.88
SDR39U1-220ENST00000556548 KCNB1Q14721 858 aa20.53■□□□□ 0.88
SDR39U1-220ENST00000556548 TANGO6Q9C0B7 1094 aa20.53■□□□□ 0.88
SDR39U1-220ENST00000556548 FHDC1Q9C0D6 1143 aaPredicted RBP20.53■□□□□ 0.88
SDR39U1-220ENST00000556548 EXOC1Q9NV70 894 aa20.53■□□□□ 0.88
SDR39U1-220ENST00000556548 MYMKA6NI61 221 aa20.53■□□□□ 0.88
SDR39U1-220ENST00000556548 PMS1P54277 932 aaKnown RBP20.53■□□□□ 0.88
SDR39U1-220ENST00000556548 AMPD3Q01432 767 aa20.53■□□□□ 0.88
SDR39U1-220ENST00000556548 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.53■□□□□ 0.88
SDR39U1-220ENST00000556548 ADSSL1Q8N142 457 aa20.53■□□□□ 0.88
SDR39U1-220ENST00000556548 RAD54LQ92698 747 aa20.53■□□□□ 0.88
SDR39U1-220ENST00000556548 SPTLC3Q9NUV7 552 aa20.53■□□□□ 0.88
SDR39U1-220ENST00000556548 GPRC5DQ9NZD1 345 aa20.53■□□□□ 0.88
SDR39U1-220ENST00000556548 GCOM1H8Y6P7 765 aaPredicted RBP20.52■□□□□ 0.88
SDR39U1-220ENST00000556548 POLR2MP0CAP2 368 aa20.52■□□□□ 0.88
SDR39U1-220ENST00000556548 STK4Q13043 487 aa20.52■□□□□ 0.88
SDR39U1-220ENST00000556548 CDKAL1Q5VV42 579 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms