RNA–Protein interactions for RNA: ENST00000556507.1

TGFB3-205, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-205ENST00000556507 MIS18AQ9NYP9 233 aa4.87□□□□□ -1.63
TGFB3-205ENST00000556507 REV1Q9UBZ9 1251 aa4.87□□□□□ -1.63
TGFB3-205ENST00000556507 KLHL3Q9UH77 587 aa4.87□□□□□ -1.63
TGFB3-205ENST00000556507 CTNND2Q9UQB3 1225 aa4.87□□□□□ -1.63
TGFB3-205ENST00000556507 POLR3KQ9Y2Y1 108 aaPredicted RBP4.87□□□□□ -1.63
TGFB3-205ENST00000556507 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.87□□□□□ -1.63
TGFB3-205ENST00000556507 RGS12O14924 1447 aa4.87□□□□□ -1.63
TGFB3-205ENST00000556507 RIMS1Q86UR5 1692 aaKnown RBP4.86□□□□□ -1.63
TGFB3-205ENST00000556507 REC8O95072 547 aa4.86□□□□□ -1.63
TGFB3-205ENST00000556507 HTR3BO95264 441 aa4.86□□□□□ -1.63
TGFB3-205ENST00000556507 HOXB7P09629 217 aa4.86□□□□□ -1.63
TGFB3-205ENST00000556507 GSPT1P15170 499 aaKnown RBP4.86□□□□□ -1.63
TGFB3-205ENST00000556507 SDSP20132 328 aa4.86□□□□□ -1.63
TGFB3-205ENST00000556507 GARTP22102 1010 aa4.86□□□□□ -1.63
TGFB3-205ENST00000556507 TNNI2P48788 182 aa4.86□□□□□ -1.63
TGFB3-205ENST00000556507 KCNMB1Q16558 191 aa4.86□□□□□ -1.63
TGFB3-205ENST00000556507 SLC4A10Q6U841 1118 aa4.86□□□□□ -1.63
TGFB3-205ENST00000556507 G2E3Q7L622 706 aa4.86□□□□□ -1.63
TGFB3-205ENST00000556507 ERMP1Q7Z2K6 904 aa4.86□□□□□ -1.63
TGFB3-205ENST00000556507 REC114Q7Z4M0 266 aa4.86□□□□□ -1.63
TGFB3-205ENST00000556507 ZSWIM9Q86XI8 627 aa4.86□□□□□ -1.63
TGFB3-205ENST00000556507 SLFN12Q8IYM2 578 aa4.86□□□□□ -1.63
TGFB3-205ENST00000556507 C16orf71Q8IYS4 520 aaPredicted RBP4.86□□□□□ -1.63
TGFB3-205ENST00000556507 IL17REQ8NFR9 667 aa4.86□□□□□ -1.63
TGFB3-205ENST00000556507 FBXO27Q8NI29 283 aa4.86□□□□□ -1.63
TGFB3-205ENST00000556507 CCDC120Q96HB5 630 aa4.86□□□□□ -1.63
TGFB3-205ENST00000556507 Q96M66 194 aa4.86□□□□□ -1.63
TGFB3-205ENST00000556507 GBP4Q96PP9 640 aa4.86□□□□□ -1.63
TGFB3-205ENST00000556507 MEIS3Q99687 375 aa4.86□□□□□ -1.63
TGFB3-205ENST00000556507 TRIT1Q9H3H1 467 aaKnown RBP4.86□□□□□ -1.63
TGFB3-205ENST00000556507 CWC22Q9HCG8 908 aaKnown RBP4.86□□□□□ -1.63
TGFB3-205ENST00000556507 ISY1Q9ULR0 285 aaKnown RBP4.86□□□□□ -1.63
TGFB3-205ENST00000556507 MAP3K5Q99683 1374 aa4.86□□□□□ -1.63
TGFB3-205ENST00000556507 ATP10DQ9P241 1426 aa4.86□□□□□ -1.63
TGFB3-205ENST00000556507 NCOA3Q9Y6Q9 1424 aa4.86□□□□□ -1.63
TGFB3-205ENST00000556507 XRN1Q8IZH2 1706 aaKnown RBP4.86□□□□□ -1.63
TGFB3-205ENST00000556507 CHURC1-FNTBB4DL54 471 aa4.85□□□□□ -1.63
TGFB3-205ENST00000556507 ERC2O15083 957 aa4.85□□□□□ -1.63
TGFB3-205ENST00000556507 TLR3O15455 904 aaKnown RBP4.85□□□□□ -1.63
TGFB3-205ENST00000556507 EPB41L2O43491 1005 aaKnown RBP4.85□□□□□ -1.63
TGFB3-205ENST00000556507 RAB11FIP3O75154 756 aa4.85□□□□□ -1.63
TGFB3-205ENST00000556507 HSP90AA1P07900 732 aaKnown RBP4.85□□□□□ -1.63
TGFB3-205ENST00000556507 EIF4A3P38919 411 aaKnown RBP4.85□□□□□ -1.63
TGFB3-205ENST00000556507 GDNFP39905 211 aa4.85□□□□□ -1.63
TGFB3-205ENST00000556507 PDE1AP54750 535 aa4.85□□□□□ -1.63
TGFB3-205ENST00000556507 RAB3GAP1Q15042 981 aa4.85□□□□□ -1.63
TGFB3-205ENST00000556507 CWF19L2Q2TBE0 894 aaKnown RBP4.85□□□□□ -1.63
TGFB3-205ENST00000556507 AMOTQ4VCS5 1084 aa4.85□□□□□ -1.63
TGFB3-205ENST00000556507 PLEKHO1Q53GL0 409 aaPredicted RBP4.85□□□□□ -1.63
TGFB3-205ENST00000556507 FYB2Q5VWT5 728 aa4.85□□□□□ -1.63
TGFB3-205ENST00000556507 FBXL19Q6PCT2 694 aa4.85□□□□□ -1.63
TGFB3-205ENST00000556507 CLEC17AQ6ZS10 378 aa4.85□□□□□ -1.63
TGFB3-205ENST00000556507 FAM196AQ6ZSG2 479 aa4.85□□□□□ -1.63
TGFB3-205ENST00000556507 TMPRSS7Q7RTY8 843 aa4.85□□□□□ -1.63
TGFB3-205ENST00000556507 PHACTR4Q8IZ21 702 aa4.85□□□□□ -1.63
TGFB3-205ENST00000556507 CCDC74BQ96LY2 380 aa4.85□□□□□ -1.63
TGFB3-205ENST00000556507 ALPK1Q96QP1 1244 aa4.85□□□□□ -1.63
TGFB3-205ENST00000556507 DUSP15Q9H1R2 295 aaPredicted RBP4.85□□□□□ -1.63
TGFB3-205ENST00000556507 GPATCH2Q9NW75 528 aa4.85□□□□□ -1.63
TGFB3-205ENST00000556507 STAP2Q9UGK3 403 aa4.85□□□□□ -1.63
TGFB3-205ENST00000556507 GGT7Q9UJ14 662 aa4.85□□□□□ -1.63
TGFB3-205ENST00000556507 KCNH3Q9ULD8 1083 aa4.85□□□□□ -1.63
TGFB3-205ENST00000556507 HDAC5Q9UQL6 1122 aa4.85□□□□□ -1.63
TGFB3-205ENST00000556507 USP54Q70EL1 1684 aa4.85□□□□□ -1.63
TGFB3-205ENST00000556507 FER1L4A9Z1Z3 1794 aa4.84□□□□□ -1.63
TGFB3-205ENST00000556507 FMN2Q9NZ56 1722 aa4.84□□□□□ -1.63
TGFB3-205ENST00000556507 PIK3C2AO00443 1686 aa4.84□□□□□ -1.63
TGFB3-205ENST00000556507 CEP170BQ9Y4F5 1589 aaPredicted RBP4.84□□□□□ -1.63
TGFB3-205ENST00000556507 ADGRL3Q9HAR2 1447 aa4.84□□□□□ -1.63
TGFB3-205ENST00000556507 MSH6P52701 1360 aa4.84□□□□□ -1.63
TGFB3-205ENST00000556507 AOX1Q06278 1338 aa4.84□□□□□ -1.63
TGFB3-205ENST00000556507 GOLGA6L3A6NEY3 463 aa4.84□□□□□ -1.63
TGFB3-205ENST00000556507 WASH4PA8MWX3 477 aa4.84□□□□□ -1.63
TGFB3-205ENST00000556507 GOLGA6L22H0YM25 854 aa4.84□□□□□ -1.63
TGFB3-205ENST00000556507 SMARCA5O60264 1052 aaPredicted RBP4.84□□□□□ -1.63
TGFB3-205ENST00000556507 FARP2O94887 1054 aaPredicted RBP4.84□□□□□ -1.63
TGFB3-205ENST00000556507 C8AP07357 584 aa4.84□□□□□ -1.63
TGFB3-205ENST00000556507 TPP2P29144 1249 aaPredicted RBP4.84□□□□□ -1.63
TGFB3-205ENST00000556507 MCM2P49736 904 aa4.84□□□□□ -1.63
TGFB3-205ENST00000556507 CHMP4BP1P59074 171 aa4.84□□□□□ -1.63
TGFB3-205ENST00000556507 NUCB2P80303 420 aa4.84□□□□□ -1.63
TGFB3-205ENST00000556507 MRPL58Q14197 206 aaKnown RBP4.84□□□□□ -1.63
TGFB3-205ENST00000556507 ZNF648Q5T619 568 aaPredicted RBP4.84□□□□□ -1.63
TGFB3-205ENST00000556507 HS2ST1Q7LGA3 356 aa4.84□□□□□ -1.63
TGFB3-205ENST00000556507 CREG2Q8IUH2 290 aa4.84□□□□□ -1.63
TGFB3-205ENST00000556507 DHX37Q8IY37 1157 aaKnown RBP4.84□□□□□ -1.63
TGFB3-205ENST00000556507 FAM177A1Q8N128 213 aaPredicted RBP4.84□□□□□ -1.63
TGFB3-205ENST00000556507 BAHD1Q8TBE0 780 aaPredicted RBP4.84□□□□□ -1.63
TGFB3-205ENST00000556507 RNF141Q8WVD5 230 aa4.84□□□□□ -1.63
TGFB3-205ENST00000556507 TNPO1Q92973 898 aaKnown RBP4.84□□□□□ -1.63
TGFB3-205ENST00000556507 LTV1Q96GA3 475 aaPredicted RBP4.84□□□□□ -1.63
TGFB3-205ENST00000556507 KIRREL1Q96J84 757 aa4.84□□□□□ -1.63
TGFB3-205ENST00000556507 LRRCC1Q9C099 1032 aa4.84□□□□□ -1.63
TGFB3-205ENST00000556507 FAM53CQ9NYF3 392 aa4.84□□□□□ -1.63
TGFB3-205ENST00000556507 SLAMF8Q9P0V8 285 aa4.84□□□□□ -1.63
TGFB3-205ENST00000556507 CEMIPQ8WUJ3 1361 aa4.83□□□□□ -1.64
TGFB3-205ENST00000556507 FSD2A1L4K1 749 aa4.83□□□□□ -1.64
TGFB3-205ENST00000556507 LRRC10BA6NIK2 292 aa4.83□□□□□ -1.64
TGFB3-205ENST00000556507 GREM1O60565 184 aa4.83□□□□□ -1.64
TGFB3-205ENST00000556507 LRRN2O75325 713 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms