RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 MTG1Q9BT17 334 aaPredicted RBP26.36■■□□□ 1.81
ACTN1-220ENST00000556433 NOC4LQ9BVI4 516 aaKnown RBP26.36■■□□□ 1.81
ACTN1-220ENST00000556433 ALDH8A1Q9H2A2 487 aaPredicted RBP26.36■■□□□ 1.81
ACTN1-220ENST00000556433 UMODL1Q5DID0 1318 aa26.36■■□□□ 1.81
ACTN1-220ENST00000556433 TTLL4Q14679 1199 aa26.35■■□□□ 1.81
ACTN1-220ENST00000556433 NSUN6Q8TEA1 469 aaKnown RBP26.35■■□□□ 1.81
ACTN1-220ENST00000556433 MYLIPQ8WY64 445 aa26.35■■□□□ 1.81
ACTN1-220ENST00000556433 U3KPZ7 1027 aaPredicted RBP26.35■■□□□ 1.81
ACTN1-220ENST00000556433 DNAJB2P25686 324 aa26.34■■□□□ 1.81
ACTN1-220ENST00000556433 PTH1RQ03431 593 aa26.34■■□□□ 1.81
ACTN1-220ENST00000556433 RASIP1Q5U651 963 aa26.34■■□□□ 1.81
ACTN1-220ENST00000556433 COL20A1Q9P218 1284 aa26.34■■□□□ 1.81
ACTN1-220ENST00000556433 A6NJR5 290 aa26.33■■□□□ 1.81
ACTN1-220ENST00000556433 KLRF2D3W0D1 207 aa26.33■■□□□ 1.81
ACTN1-220ENST00000556433 KPNA6O60684 536 aa26.33■■□□□ 1.81
ACTN1-220ENST00000556433 FGBP02675 491 aa26.33■■□□□ 1.81
ACTN1-220ENST00000556433 SUPT20HL2P0C7V6 817 aa26.33■■□□□ 1.81
ACTN1-220ENST00000556433 RMDN3Q96TC7 470 aa26.33■■□□□ 1.81
ACTN1-220ENST00000556433 TRMT13Q9NUP7 481 aaKnown RBP26.33■■□□□ 1.81
ACTN1-220ENST00000556433 GRXCR1A8MXD5 290 aa26.32■■□□□ 1.8
ACTN1-220ENST00000556433 ARIH2O95376 493 aa26.32■■□□□ 1.8
ACTN1-220ENST00000556433 CYP21A2P08686 494 aa26.32■■□□□ 1.8
ACTN1-220ENST00000556433 NBPF20Q3BBV1 942 aa26.32■■□□□ 1.8
ACTN1-220ENST00000556433 SEPT14Q6ZU15 432 aa26.32■■□□□ 1.8
ACTN1-220ENST00000556433 HERVK_113Q902F9 699 aa26.32■■□□□ 1.8
ACTN1-220ENST00000556433 TIFAQ96CG3 184 aa26.32■■□□□ 1.8
ACTN1-220ENST00000556433 IWS1Q96ST2 819 aa26.32■■□□□ 1.8
ACTN1-220ENST00000556433 AMNQ9BXJ7 453 aa26.32■■□□□ 1.8
ACTN1-220ENST00000556433 CYP2C9P11712 490 aa26.31■■□□□ 1.8
ACTN1-220ENST00000556433 STXBP2Q15833 593 aa26.31■■□□□ 1.8
ACTN1-220ENST00000556433 FAM47CQ5HY64 1035 aa26.31■■□□□ 1.8
ACTN1-220ENST00000556433 ARHGEF16Q5VV41 709 aa26.31■■□□□ 1.8
ACTN1-220ENST00000556433 CCDC62Q6P9F0 684 aa26.31■■□□□ 1.8
ACTN1-220ENST00000556433 MAFAQ8NHW3 353 aaPredicted RBP26.31■■□□□ 1.8
ACTN1-220ENST00000556433 WNT8AQ9H1J5 351 aa26.31■■□□□ 1.8
ACTN1-220ENST00000556433 MAD2L2Q9UI95 211 aa26.31■■□□□ 1.8
ACTN1-220ENST00000556433 PALM3A6NDB9 673 aaPredicted RBP26.3■■□□□ 1.8
ACTN1-220ENST00000556433 IFIT3O14879 490 aaKnown RBP26.3■■□□□ 1.8
ACTN1-220ENST00000556433 CFBP00751 764 aa26.3■■□□□ 1.8
ACTN1-220ENST00000556433 FOSL2P15408 326 aa26.3■■□□□ 1.8
ACTN1-220ENST00000556433 GRIN2CQ14957 1233 aa26.3■■□□□ 1.8
ACTN1-220ENST00000556433 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.3■■□□□ 1.8
ACTN1-220ENST00000556433 RPUSD2Q8IZ73 545 aaKnown RBP26.3■■□□□ 1.8
ACTN1-220ENST00000556433 MTIF3Q9H2K0 278 aaKnown RBP26.3■■□□□ 1.8
ACTN1-220ENST00000556433 ZNF576Q9H609 170 aa26.3■■□□□ 1.8
ACTN1-220ENST00000556433 ERICH2A1L162 156 aa26.29■■□□□ 1.8
ACTN1-220ENST00000556433 EIF2AK2P19525 551 aaKnown RBP26.29■■□□□ 1.8
ACTN1-220ENST00000556433 PBX2P40425 430 aa26.29■■□□□ 1.8
ACTN1-220ENST00000556433 LY6KQ17RY6 165 aa26.29■■□□□ 1.8
ACTN1-220ENST00000556433 OTOP2Q7RTS6 562 aa26.29■■□□□ 1.8
ACTN1-220ENST00000556433 RALYLQ86SE5 291 aaKnown RBP26.29■■□□□ 1.8
ACTN1-220ENST00000556433 PPP1R13LQ8WUF5 828 aa26.29■■□□□ 1.8
ACTN1-220ENST00000556433 SCLYQ96I15 445 aa26.29■■□□□ 1.8
ACTN1-220ENST00000556433 PBX4Q9BYU1 374 aa26.29■■□□□ 1.8
ACTN1-220ENST00000556433 CXXC1Q9P0U4 656 aaPredicted RBP26.29■■□□□ 1.8
ACTN1-220ENST00000556433 E7EWF7 191 aa26.28■■□□□ 1.8
ACTN1-220ENST00000556433 ZBTB5O15062 677 aa26.28■■□□□ 1.8
ACTN1-220ENST00000556433 SGSM2O43147 1006 aa26.28■■□□□ 1.8
ACTN1-220ENST00000556433 GH1P01241 217 aa26.28■■□□□ 1.8
ACTN1-220ENST00000556433 NFRKBQ6P4R8 1299 aa26.28■■□□□ 1.8
ACTN1-220ENST00000556433 NCOA7Q8NI08 942 aa26.28■■□□□ 1.8
ACTN1-220ENST00000556433 AFG1LQ8WV93 481 aa26.28■■□□□ 1.8
ACTN1-220ENST00000556433 MTMR8Q96EF0 704 aa26.28■■□□□ 1.8
ACTN1-220ENST00000556433 PCDHA1Q9Y5I3 950 aa26.28■■□□□ 1.8
ACTN1-220ENST00000556433 TAF6LQ9Y6J9 622 aa26.28■■□□□ 1.8
ACTN1-220ENST00000556433 PPP1R11O60927 126 aaPredicted RBP26.27■■□□□ 1.8
ACTN1-220ENST00000556433 EIF3JO75822 258 aaKnown RBP26.27■■□□□ 1.8
ACTN1-220ENST00000556433 NR3C2P08235 984 aa26.27■■□□□ 1.8
ACTN1-220ENST00000556433 CHMP4BP1P59074 171 aa26.27■■□□□ 1.8
ACTN1-220ENST00000556433 GRM4Q14833 912 aa26.27■■□□□ 1.8
ACTN1-220ENST00000556433 CHST3Q7LGC8 479 aa26.27■■□□□ 1.8
ACTN1-220ENST00000556433 SENP2Q9HC62 589 aa26.27■■□□□ 1.8
ACTN1-220ENST00000556433 PXMP2Q9NR77 195 aa26.27■■□□□ 1.8
ACTN1-220ENST00000556433 OPLAHO14841 1288 aa26.26■■□□□ 1.79
ACTN1-220ENST00000556433 HSD17B4P51659 736 aa26.26■■□□□ 1.79
ACTN1-220ENST00000556433 PTPN11Q06124 597 aaPredicted RBP26.26■■□□□ 1.79
ACTN1-220ENST00000556433 WTAPQ15007 396 aa26.26■■□□□ 1.79
ACTN1-220ENST00000556433 SART3Q15020 963 aaKnown RBP26.26■■□□□ 1.79
ACTN1-220ENST00000556433 HOMER1Q86YM7 354 aa26.26■■□□□ 1.79
ACTN1-220ENST00000556433 MSRAQ9UJ68 235 aa26.26■■□□□ 1.79
ACTN1-220ENST00000556433 ARHGAP1Q07960 439 aa26.25■■□□□ 1.79
ACTN1-220ENST00000556433 STOX1Q6ZVD7 989 aa26.25■■□□□ 1.79
ACTN1-220ENST00000556433 MAP4K1Q92918 833 aa26.25■■□□□ 1.79
ACTN1-220ENST00000556433 MAP3K20Q9NYL2 800 aaKnown RBP26.25■■□□□ 1.79
ACTN1-220ENST00000556433 DDX41Q9UJV9 622 aaKnown RBP26.25■■□□□ 1.79
ACTN1-220ENST00000556433 MMP3P08254 477 aa26.24■■□□□ 1.79
ACTN1-220ENST00000556433 GHRHRQ02643 423 aa26.24■■□□□ 1.79
ACTN1-220ENST00000556433 RAB30Q15771 203 aa26.24■■□□□ 1.79
ACTN1-220ENST00000556433 SLC35G1Q2M3R5 365 aa26.24■■□□□ 1.79
ACTN1-220ENST00000556433 VWCEQ96DN2 955 aa26.24■■□□□ 1.79
ACTN1-220ENST00000556433 PIGSQ96S52 555 aa26.24■■□□□ 1.79
ACTN1-220ENST00000556433 RIOX1Q9H6W3 641 aa26.24■■□□□ 1.79
ACTN1-220ENST00000556433 MYH6P13533 1939 aa26.24■■□□□ 1.79
ACTN1-220ENST00000556433 MYCLP12524 364 aaPredicted RBP26.23■■□□□ 1.79
ACTN1-220ENST00000556433 CASTP20810 708 aaKnown RBP26.23■■□□□ 1.79
ACTN1-220ENST00000556433 TROAPQ12815 778 aa26.23■■□□□ 1.79
ACTN1-220ENST00000556433 TRAF1Q13077 416 aa26.23■■□□□ 1.79
ACTN1-220ENST00000556433 TMEM67Q5HYA8 995 aa26.23■■□□□ 1.79
ACTN1-220ENST00000556433 DEFB128Q7Z7B8 93 aa26.23■■□□□ 1.79
ACTN1-220ENST00000556433 SAMD3Q8N6K7 520 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms