RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 CETPP11597 493 aa11.21□□□□□ -0.61
GTF2A1-204ENST00000556268 SETDB1Q15047 1291 aa11.21□□□□□ -0.61
GTF2A1-204ENST00000556268 TAF1CQ15572 869 aaPredicted RBP11.21□□□□□ -0.61
GTF2A1-204ENST00000556268 CAVIN4Q5BKX8 364 aa11.21□□□□□ -0.61
GTF2A1-204ENST00000556268 TXNDC11Q6PKC3 985 aa11.21□□□□□ -0.61
GTF2A1-204ENST00000556268 C17orf99Q6UX52 265 aa11.21□□□□□ -0.61
GTF2A1-204ENST00000556268 TEKT1Q969V4 418 aa11.21□□□□□ -0.61
GTF2A1-204ENST00000556268 POP1Q99575 1024 aaKnown RBP11.21□□□□□ -0.61
GTF2A1-204ENST00000556268 USP44Q9H0E7 712 aa11.21□□□□□ -0.61
GTF2A1-204ENST00000556268 TPSG1Q9NRR2 321 aa11.21□□□□□ -0.61
GTF2A1-204ENST00000556268 ZNF112Q9UJU3 913 aa11.21□□□□□ -0.61
GTF2A1-204ENST00000556268 BRPF3Q9ULD4 1205 aa11.21□□□□□ -0.61
GTF2A1-204ENST00000556268 PTCH2Q9Y6C5 1203 aa11.21□□□□□ -0.61
GTF2A1-204ENST00000556268 CDC27P30260 824 aa11.2□□□□□ -0.62
GTF2A1-204ENST00000556268 PRMT2P55345 433 aa11.2□□□□□ -0.62
GTF2A1-204ENST00000556268 LACTBP83111 547 aaPredicted RBP11.2□□□□□ -0.62
GTF2A1-204ENST00000556268 PPATQ06203 517 aa11.2□□□□□ -0.62
GTF2A1-204ENST00000556268 PPIL2Q13356 520 aa11.2□□□□□ -0.62
GTF2A1-204ENST00000556268 SNAPC2Q13487 334 aa11.2□□□□□ -0.62
GTF2A1-204ENST00000556268 VPS37DQ86XT2 251 aa11.2□□□□□ -0.62
GTF2A1-204ENST00000556268 ZKSCAN4Q969J2 545 aaPredicted RBP11.2□□□□□ -0.62
GTF2A1-204ENST00000556268 HOOK2Q96ED9 719 aa11.2□□□□□ -0.62
GTF2A1-204ENST00000556268 HHIPQ96QV1 700 aa11.2□□□□□ -0.62
GTF2A1-204ENST00000556268 MUC3BQ9H195 1237 aa11.2□□□□□ -0.62
GTF2A1-204ENST00000556268 SRA1Q9HD15 236 aaKnown RBP11.2□□□□□ -0.62
GTF2A1-204ENST00000556268 DZANK1Q9NVP4 752 aa11.2□□□□□ -0.62
GTF2A1-204ENST00000556268 A0A1B0GUL6 1792 aa11.19□□□□□ -0.62
GTF2A1-204ENST00000556268 ZNF521Q96K83 1311 aa11.19□□□□□ -0.62
GTF2A1-204ENST00000556268 LINC01387J3KSC0 135 aa11.19□□□□□ -0.62
GTF2A1-204ENST00000556268 K7ELQ4 463 aaPredicted RBP11.19□□□□□ -0.62
GTF2A1-204ENST00000556268 PTPRAP18433 802 aa11.19□□□□□ -0.62
GTF2A1-204ENST00000556268 RFX5P48382 616 aaPredicted RBP11.19□□□□□ -0.62
GTF2A1-204ENST00000556268 CACNB3P54284 484 aa11.19□□□□□ -0.62
GTF2A1-204ENST00000556268 CHAF1AQ13111 956 aaPredicted RBP11.19□□□□□ -0.62
GTF2A1-204ENST00000556268 MOGSQ13724 837 aa11.19□□□□□ -0.62
GTF2A1-204ENST00000556268 SLC9C1Q4G0N8 1177 aa11.19□□□□□ -0.62
GTF2A1-204ENST00000556268 METTL24Q5JXM2 366 aa11.19□□□□□ -0.62
GTF2A1-204ENST00000556268 IGF2-ASQ6U949 168 aa11.19□□□□□ -0.62
GTF2A1-204ENST00000556268 FAM151AQ8WW52 585 aa11.19□□□□□ -0.62
GTF2A1-204ENST00000556268 ARHGAP39Q9C0H5 1083 aa11.19□□□□□ -0.62
GTF2A1-204ENST00000556268 NDUFB5O43674 189 aa11.18□□□□□ -0.62
GTF2A1-204ENST00000556268 WDHD1O75717 1129 aaPredicted RBP11.18□□□□□ -0.62
GTF2A1-204ENST00000556268 BRD1O95696 1058 aa11.18□□□□□ -0.62
GTF2A1-204ENST00000556268 EPHA1P21709 976 aa11.18□□□□□ -0.62
GTF2A1-204ENST00000556268 CDC25BP30305 580 aa11.18□□□□□ -0.62
GTF2A1-204ENST00000556268 FXR1P51114 621 aaKnown RBP eCLIP11.18□□□□□ -0.62
GTF2A1-204ENST00000556268 MAP4K3Q8IVH8 894 aa11.18□□□□□ -0.62
GTF2A1-204ENST00000556268 KLHDC4Q8TBB5 520 aa11.18□□□□□ -0.62
GTF2A1-204ENST00000556268 WRNIP1Q96S55 665 aa11.18□□□□□ -0.62
GTF2A1-204ENST00000556268 SH2B1Q9NRF2 756 aaPredicted RBP11.18□□□□□ -0.62
GTF2A1-204ENST00000556268 EYA2O00167 538 aa11.17□□□□□ -0.62
GTF2A1-204ENST00000556268 FRAT2O75474 233 aaPredicted RBP11.17□□□□□ -0.62
GTF2A1-204ENST00000556268 IFIT1P09914 478 aaKnown RBP11.17□□□□□ -0.62
GTF2A1-204ENST00000556268 CTGFP29279 349 aa11.17□□□□□ -0.62
GTF2A1-204ENST00000556268 PUM3Q15397 648 aaKnown RBP11.17□□□□□ -0.62
GTF2A1-204ENST00000556268 DCAF15Q66K64 600 aa11.17□□□□□ -0.62
GTF2A1-204ENST00000556268 MIGA2Q7L4E1 593 aa11.17□□□□□ -0.62
GTF2A1-204ENST00000556268 ATG9AQ7Z3C6 839 aa11.17□□□□□ -0.62
GTF2A1-204ENST00000556268 ANKRD23Q86SG2 305 aa11.17□□□□□ -0.62
GTF2A1-204ENST00000556268 WDR66Q8TBY9 1149 aa11.17□□□□□ -0.62
GTF2A1-204ENST00000556268 LPIN2Q92539 896 aa11.17□□□□□ -0.62
GTF2A1-204ENST00000556268 ZKSCAN3Q9BRR0 538 aa11.17□□□□□ -0.62
GTF2A1-204ENST00000556268 ZNF341Q9BYN7 854 aa11.17□□□□□ -0.62
GTF2A1-204ENST00000556268 TMOD2Q9NZR1 351 aa11.17□□□□□ -0.62
GTF2A1-204ENST00000556268 RBBP6Q7Z6E9 1792 aaKnown RBP11.17□□□□□ -0.62
GTF2A1-204ENST00000556268 MAST3O60307 1309 aa11.16□□□□□ -0.62
GTF2A1-204ENST00000556268 PTPRCP08575 1304 aa11.16□□□□□ -0.62
GTF2A1-204ENST00000556268 ADGRA2Q96PE1 1338 aa11.16□□□□□ -0.62
GTF2A1-204ENST00000556268 PDE2AO00408 941 aaPredicted RBP11.16□□□□□ -0.62
GTF2A1-204ENST00000556268 CXCL11O14625 94 aa11.16□□□□□ -0.62
GTF2A1-204ENST00000556268 ANP32CO43423 234 aa11.16□□□□□ -0.62
GTF2A1-204ENST00000556268 EDN3P14138 238 aa11.16□□□□□ -0.62
GTF2A1-204ENST00000556268 KIF22Q14807 665 aa11.16□□□□□ -0.62
GTF2A1-204ENST00000556268 SLC4A8Q2Y0W8 1093 aa11.16□□□□□ -0.62
GTF2A1-204ENST00000556268 NOL9Q5SY16 702 aaKnown RBP11.16□□□□□ -0.62
GTF2A1-204ENST00000556268 CDC42EP5Q6NZY7 148 aa11.16□□□□□ -0.62
GTF2A1-204ENST00000556268 UBE2Q1Q7Z7E8 422 aa11.16□□□□□ -0.62
GTF2A1-204ENST00000556268 GALNT11Q8NCW6 608 aa11.16□□□□□ -0.62
GTF2A1-204ENST00000556268 SH3TC2Q8TF17 1288 aa11.16□□□□□ -0.62
GTF2A1-204ENST00000556268 OSMRQ99650 979 aa11.16□□□□□ -0.62
GTF2A1-204ENST00000556268 ADAM19Q9H013 955 aa11.16□□□□□ -0.62
GTF2A1-204ENST00000556268 LATS2Q9NRM7 1088 aa11.16□□□□□ -0.62
GTF2A1-204ENST00000556268 SRRDQ9UH36 339 aa11.16□□□□□ -0.62
GTF2A1-204ENST00000556268 RPAP1Q9BWH6 1393 aaPredicted RBP11.16□□□□□ -0.62
GTF2A1-204ENST00000556268 CEP290O15078 2479 aa11.15□□□□□ -0.62
GTF2A1-204ENST00000556268 SOWAHDA6NJG2 315 aa11.15□□□□□ -0.62
GTF2A1-204ENST00000556268 H0YGN5 161 aa11.15□□□□□ -0.62
GTF2A1-204ENST00000556268 PSMC4P43686 418 aa11.15□□□□□ -0.62
GTF2A1-204ENST00000556268 RSPO4Q2I0M5 234 aaPredicted RBP11.15□□□□□ -0.62
GTF2A1-204ENST00000556268 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.15□□□□□ -0.62
GTF2A1-204ENST00000556268 SSH1Q8WYL5 1049 aa11.15□□□□□ -0.62
GTF2A1-204ENST00000556268 GNEQ9Y223 722 aaKnown RBP11.15□□□□□ -0.62
GTF2A1-204ENST00000556268 DAGLAQ9Y4D2 1042 aa11.15□□□□□ -0.62
GTF2A1-204ENST00000556268 OTOFQ9HC10 1997 aa11.14□□□□□ -0.63
GTF2A1-204ENST00000556268 PDHXO00330 501 aa11.14□□□□□ -0.63
GTF2A1-204ENST00000556268 POLR3DP05423 398 aaPredicted RBP11.14□□□□□ -0.63
GTF2A1-204ENST00000556268 HOXD10P28358 340 aa11.14□□□□□ -0.63
GTF2A1-204ENST00000556268 NOS3P29474 1203 aa11.14□□□□□ -0.63
GTF2A1-204ENST00000556268 NFIAQ12857 509 aa11.14□□□□□ -0.63
GTF2A1-204ENST00000556268 ZFPM1Q8IX07 1006 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms