RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 RABEP2Q9H5N1 569 aa16.46■□□□□ 0.23
NEK9-209ENST00000556170 HAUS4Q9H6D7 363 aa16.46■□□□□ 0.23
NEK9-209ENST00000556170 AGPAT5Q9NUQ2 364 aa16.46■□□□□ 0.23
NEK9-209ENST00000556170 MTMR4Q9NYA4 1195 aa16.46■□□□□ 0.23
NEK9-209ENST00000556170 RAD17O75943 681 aa16.45■□□□□ 0.22
NEK9-209ENST00000556170 SARSP49591 514 aaKnown RBP16.45■□□□□ 0.22
NEK9-209ENST00000556170 FBXO11Q86XK2 927 aa16.45■□□□□ 0.22
NEK9-209ENST00000556170 SCN11AQ9UI33 1791 aa16.45■□□□□ 0.22
NEK9-209ENST00000556170 A0A0U1RQJ8 604 aa16.45■□□□□ 0.22
NEK9-209ENST00000556170 SFI1A8K8P3 1242 aa16.45■□□□□ 0.22
NEK9-209ENST00000556170 SF3B2Q13435 895 aaKnown RBP16.45■□□□□ 0.22
NEK9-209ENST00000556170 GPATCH4Q5T3I0 446 aaKnown RBP16.45■□□□□ 0.22
NEK9-209ENST00000556170 ATRIPQ8WXE1 791 aa16.45■□□□□ 0.22
NEK9-209ENST00000556170 LSM14BQ9BX40 385 aaKnown RBP16.45■□□□□ 0.22
NEK9-209ENST00000556170 LGALS16A8MUM7 142 aa16.45■□□□□ 0.22
NEK9-209ENST00000556170 GYS1P13807 737 aa16.45■□□□□ 0.22
NEK9-209ENST00000556170 ZNF18P17022 549 aa16.45■□□□□ 0.22
NEK9-209ENST00000556170 CAPN2P17655 700 aa16.45■□□□□ 0.22
NEK9-209ENST00000556170 STAT3P40763 770 aa16.45■□□□□ 0.22
NEK9-209ENST00000556170 FUT2Q10981 343 aa16.45■□□□□ 0.22
NEK9-209ENST00000556170 ADAM9Q13443 819 aa16.45■□□□□ 0.22
NEK9-209ENST00000556170 HAUS3Q68CZ6 603 aa16.45■□□□□ 0.22
NEK9-209ENST00000556170 HDXQ7Z353 690 aa16.45■□□□□ 0.22
NEK9-209ENST00000556170 AMIGO3Q86WK7 504 aa16.45■□□□□ 0.22
NEK9-209ENST00000556170 PLEKHG2Q9H7P9 1386 aa16.45■□□□□ 0.22
NEK9-209ENST00000556170 PNMA6FA0A0J9YX94 578 aa16.45■□□□□ 0.22
NEK9-209ENST00000556170 ADSSL1Q8N142 457 aa16.45■□□□□ 0.22
NEK9-209ENST00000556170 RABGGTAQ92696 567 aa16.45■□□□□ 0.22
NEK9-209ENST00000556170 NHEJ1Q9H9Q4 299 aaPredicted RBP16.45■□□□□ 0.22
NEK9-209ENST00000556170 PDHBP11177 359 aa16.44■□□□□ 0.22
NEK9-209ENST00000556170 PPP1R2P41236 205 aa16.44■□□□□ 0.22
NEK9-209ENST00000556170 CRKP46108 304 aa16.44■□□□□ 0.22
NEK9-209ENST00000556170 RASSF7Q02833 373 aa16.44■□□□□ 0.22
NEK9-209ENST00000556170 NFIAQ12857 509 aa16.44■□□□□ 0.22
NEK9-209ENST00000556170 LONRF2Q1L5Z9 754 aa16.44■□□□□ 0.22
NEK9-209ENST00000556170 MIGA2Q7L4E1 593 aa16.44■□□□□ 0.22
NEK9-209ENST00000556170 NDST4Q9H3R1 872 aa16.44■□□□□ 0.22
NEK9-209ENST00000556170 EEF2P13639 858 aaKnown RBP16.44■□□□□ 0.22
NEK9-209ENST00000556170 PMS1P54277 932 aaKnown RBP16.44■□□□□ 0.22
NEK9-209ENST00000556170 KLHL30Q0D2K2 578 aa16.44■□□□□ 0.22
NEK9-209ENST00000556170 SLC9C1Q4G0N8 1177 aa16.44■□□□□ 0.22
NEK9-209ENST00000556170 MYCT1Q8N699 235 aa16.44■□□□□ 0.22
NEK9-209ENST00000556170 RTFDC1Q9BY42 306 aaPredicted RBP16.44■□□□□ 0.22
NEK9-209ENST00000556170 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.44■□□□□ 0.22
NEK9-209ENST00000556170 GPR75-ASB3A0A0A6YYF3 556 aa16.44■□□□□ 0.22
NEK9-209ENST00000556170 POTEB3A0JP26 581 aa16.44■□□□□ 0.22
NEK9-209ENST00000556170 POTECB2RU33 542 aa16.44■□□□□ 0.22
NEK9-209ENST00000556170 GH2P01242 217 aa16.44■□□□□ 0.22
NEK9-209ENST00000556170 CDC37Q16543 378 aaPredicted RBP16.44■□□□□ 0.22
NEK9-209ENST00000556170 POTEBQ6S5H4 581 aa16.44■□□□□ 0.22
NEK9-209ENST00000556170 SCAF8Q9UPN6 1271 aaKnown RBP16.44■□□□□ 0.22
NEK9-209ENST00000556170 TNIP1Q15025 636 aa16.43■□□□□ 0.22
NEK9-209ENST00000556170 C16orf86Q6ZW13 317 aa16.43■□□□□ 0.22
NEK9-209ENST00000556170 CUEDC2Q9H467 287 aa16.43■□□□□ 0.22
NEK9-209ENST00000556170 NT5C3AQ9H0P0 336 aa16.43■□□□□ 0.22
NEK9-209ENST00000556170 PDE11AQ9HCR9 933 aa16.43■□□□□ 0.22
NEK9-209ENST00000556170 HDAC9Q9UKV0 1011 aa16.43■□□□□ 0.22
NEK9-209ENST00000556170 PALM3A6NDB9 673 aaPredicted RBP16.43■□□□□ 0.22
NEK9-209ENST00000556170 TADA3O75528 432 aa16.43■□□□□ 0.22
NEK9-209ENST00000556170 EIF4A3P38919 411 aaKnown RBP16.43■□□□□ 0.22
NEK9-209ENST00000556170 PDXDC2PQ6P474 469 aa16.43■□□□□ 0.22
NEK9-209ENST00000556170 HS2ST1Q7LGA3 356 aa16.43■□□□□ 0.22
NEK9-209ENST00000556170 SPZ1Q9BXG8 430 aa16.43■□□□□ 0.22
NEK9-209ENST00000556170 AMNQ9BXJ7 453 aa16.43■□□□□ 0.22
NEK9-209ENST00000556170 THAP9Q9H5L6 903 aa16.43■□□□□ 0.22
NEK9-209ENST00000556170 BCCIPQ9P287 314 aaKnown RBP eCLIP16.43■□□□□ 0.22
NEK9-209ENST00000556170 CLIC2O15247 247 aa16.42■□□□□ 0.22
NEK9-209ENST00000556170 IL17AQ16552 155 aa16.42■□□□□ 0.22
NEK9-209ENST00000556170 QRICH1Q2TAL8 776 aa16.42■□□□□ 0.22
NEK9-209ENST00000556170 ODF2Q5BJF6 829 aa16.42■□□□□ 0.22
NEK9-209ENST00000556170 ADAMTSL3P82987 1691 aa16.42■□□□□ 0.22
NEK9-209ENST00000556170 PPP4CP60510 307 aa16.42■□□□□ 0.22
NEK9-209ENST00000556170 DLGAP5Q15398 846 aa16.42■□□□□ 0.22
NEK9-209ENST00000556170 CCSER1Q9C0I3 900 aa16.42■□□□□ 0.22
NEK9-209ENST00000556170 LRRC4BQ9NT99 713 aa16.42■□□□□ 0.22
NEK9-209ENST00000556170 ATRNO75882 1429 aa16.42■□□□□ 0.22
NEK9-209ENST00000556170 CHRNA5P30532 468 aa16.42■□□□□ 0.22
NEK9-209ENST00000556170 SFMBT2Q5VUG0 894 aa16.42■□□□□ 0.22
NEK9-209ENST00000556170 CCDC17Q96LX7 622 aa16.42■□□□□ 0.22
NEK9-209ENST00000556170 ZMYND12Q9H0C1 365 aa16.42■□□□□ 0.22
NEK9-209ENST00000556170 HSD3B7Q9H2F3 369 aa16.42■□□□□ 0.22
NEK9-209ENST00000556170 PI4KBQ9UBF8 816 aa16.42■□□□□ 0.22
NEK9-209ENST00000556170 ARFGEF2Q9Y6D5 1785 aa16.42■□□□□ 0.22
NEK9-209ENST00000556170 ZBTB5O15062 677 aa16.41■□□□□ 0.22
NEK9-209ENST00000556170 ZBED6P86452 979 aa16.41■□□□□ 0.22
NEK9-209ENST00000556170 LIMA1Q9UHB6 759 aaKnown RBP16.41■□□□□ 0.22
NEK9-209ENST00000556170 NPHP3-ACAD11A0A0J9YXS1 232 aa16.41■□□□□ 0.22
NEK9-209ENST00000556170 MYMKA6NI61 221 aa16.41■□□□□ 0.22
NEK9-209ENST00000556170 SLC37A4O43826 429 aa16.41■□□□□ 0.22
NEK9-209ENST00000556170 PLA2G4BP0C869 781 aa16.41■□□□□ 0.22
NEK9-209ENST00000556170 NR2F2P24468 414 aa16.41■□□□□ 0.22
NEK9-209ENST00000556170 MCM3P25205 808 aa16.41■□□□□ 0.22
NEK9-209ENST00000556170 FKBP3Q00688 224 aaKnown RBP16.41■□□□□ 0.22
NEK9-209ENST00000556170 GABPB1Q06547 395 aaPredicted RBP16.41■□□□□ 0.22
NEK9-209ENST00000556170 ANO3Q9BYT9 981 aa16.41■□□□□ 0.22
NEK9-209ENST00000556170 SWAP70Q9UH65 585 aa16.41■□□□□ 0.22
NEK9-209ENST00000556170 FAM237AA0A1B0GTK4 181 aa16.41■□□□□ 0.22
NEK9-209ENST00000556170 POTEFA5A3E0 1075 aa16.41■□□□□ 0.22
NEK9-209ENST00000556170 MOCS3O95396 460 aa16.41■□□□□ 0.22
NEK9-209ENST00000556170 POTEIP0CG38 1075 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms