RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	BICD1	Q96G01	975 aa		13.6	□□□□□ -0.23
TMPO-212	ENST00000556029	ATP8A2	Q9NTI2	1148 aa		13.6	□□□□□ -0.23
TMPO-212	ENST00000556029	LIMA1	Q9UHB6	759 aa	Known RBP	13.6	□□□□□ -0.23
TMPO-212	ENST00000556029	GYS2	P54840	703 aa		13.59	□□□□□ -0.23
TMPO-212	ENST00000556029	WHAMMP3	Q1A5X7	153 aa		13.59	□□□□□ -0.23
TMPO-212	ENST00000556029	SPICE1	Q8N0Z3	855 aa		13.59	□□□□□ -0.23
TMPO-212	ENST00000556029	OR8K1	Q8NGG5	319 aa		13.59	□□□□□ -0.23
TMPO-212	ENST00000556029	DCP1A	Q9NPI6	582 aa	Predicted RBP	13.59	□□□□□ -0.23
TMPO-212	ENST00000556029	OPA1	O60313	960 aa		13.59	□□□□□ -0.23
TMPO-212	ENST00000556029	BBOX1	O75936	387 aa		13.59	□□□□□ -0.23
TMPO-212	ENST00000556029	VIM	P08670	466 aa	Known RBP	13.59	□□□□□ -0.23
TMPO-212	ENST00000556029	PRCP	P42785	496 aa		13.59	□□□□□ -0.23
TMPO-212	ENST00000556029	KRT83	P78385	493 aa		13.59	□□□□□ -0.23
TMPO-212	ENST00000556029	FUT2	Q10981	343 aa		13.59	□□□□□ -0.23
TMPO-212	ENST00000556029	FAM76A	Q8TAV0	307 aa		13.59	□□□□□ -0.23
TMPO-212	ENST00000556029	TRIM49B	A6NDI0	452 aa		13.59	□□□□□ -0.23
TMPO-212	ENST00000556029	DCAF17	Q5H9S7	520 aa	Predicted RBP	13.59	□□□□□ -0.23
TMPO-212	ENST00000556029	USP17L2	Q6R6M4	530 aa		13.59	□□□□□ -0.23
TMPO-212	ENST00000556029	SHISA4	Q96DD7	197 aa		13.59	□□□□□ -0.23
TMPO-212	ENST00000556029	PDE11A	Q9HCR9	933 aa		13.59	□□□□□ -0.23
TMPO-212	ENST00000556029	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	13.59	□□□□□ -0.23
TMPO-212	ENST00000556029	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.59	□□□□□ -0.23
TMPO-212	ENST00000556029	ITIH6	Q6UXX5	1313 aa		13.58	□□□□□ -0.23
TMPO-212	ENST00000556029	SMCO2	A6NFE2	343 aa		13.58	□□□□□ -0.24
TMPO-212	ENST00000556029	BAG6	P46379	1132 aa		13.58	□□□□□ -0.24
TMPO-212	ENST00000556029	KRT79	Q5XKE5	535 aa		13.58	□□□□□ -0.24
TMPO-212	ENST00000556029	GSTA5	Q7RTV2	222 aa		13.58	□□□□□ -0.24
TMPO-212	ENST00000556029	PNMA8A	Q86V59	439 aa	Predicted RBP	13.58	□□□□□ -0.24
TMPO-212	ENST00000556029	PPP1R12C	Q9BZL4	782 aa		13.58	□□□□□ -0.24
TMPO-212	ENST00000556029	TRAF5	O00463	557 aa		13.58	□□□□□ -0.24
TMPO-212	ENST00000556029	CHMP2A	O43633	222 aa		13.58	□□□□□ -0.24
TMPO-212	ENST00000556029	SLC16A2	P36021	539 aa		13.58	□□□□□ -0.24
TMPO-212	ENST00000556029	FAM212A	Q96EL1	285 aa		13.58	□□□□□ -0.24
TMPO-212	ENST00000556029	PCDHA4	Q9UN74	947 aa		13.58	□□□□□ -0.24
TMPO-212	ENST00000556029	SPATA31A6	Q5VVP1	1343 aa		13.58	□□□□□ -0.24
TMPO-212	ENST00000556029	ARL1	P40616	181 aa	Predicted RBP	13.58	□□□□□ -0.24
TMPO-212	ENST00000556029	HNRNPH2	P55795	449 aa	Known RBP	13.58	□□□□□ -0.24
TMPO-212	ENST00000556029	IRX3	P78415	501 aa	Predicted RBP	13.58	□□□□□ -0.24
TMPO-212	ENST00000556029	DLGAP5	Q15398	846 aa		13.58	□□□□□ -0.24
TMPO-212	ENST00000556029	ARL6IP4	Q66PJ3	421 aa	Known RBP	13.58	□□□□□ -0.24
TMPO-212	ENST00000556029	CSGALNACT2	Q8N6G5	542 aa		13.58	□□□□□ -0.24
TMPO-212	ENST00000556029	NSUN4	Q96CB9	384 aa	Known RBP	13.58	□□□□□ -0.24
TMPO-212	ENST00000556029	FUT8	Q9BYC5	575 aa		13.58	□□□□□ -0.24
TMPO-212	ENST00000556029	IQCG	Q9H095	443 aa	Known RBP	13.58	□□□□□ -0.24
TMPO-212	ENST00000556029	ORC4	O43929	436 aa		13.57	□□□□□ -0.24
TMPO-212	ENST00000556029	ERVK-24	P63145	666 aa		13.57	□□□□□ -0.24
TMPO-212	ENST00000556029	APTX	Q7Z2E3	356 aa	Known RBP	13.57	□□□□□ -0.24
TMPO-212	ENST00000556029	SELENOO	Q9BVL4	669 aa		13.57	□□□□□ -0.24
TMPO-212	ENST00000556029	NDUFA10	O95299	355 aa		13.57	□□□□□ -0.24
TMPO-212	ENST00000556029	PDXDC2P	Q6P474	469 aa		13.57	□□□□□ -0.24
TMPO-212	ENST00000556029	CD209	Q9NNX6	404 aa		13.57	□□□□□ -0.24
TMPO-212	ENST00000556029	ABCB6	Q9NP58	842 aa		13.57	□□□□□ -0.24
TMPO-212	ENST00000556029	DISC1	Q9NRI5	854 aa		13.57	□□□□□ -0.24
TMPO-212	ENST00000556029	MYO1A	Q9UBC5	1043 aa		13.57	□□□□□ -0.24
TMPO-212	ENST00000556029	ENC1	O14682	589 aa		13.57	□□□□□ -0.24
TMPO-212	ENST00000556029	GDF11	O95390	407 aa		13.57	□□□□□ -0.24
TMPO-212	ENST00000556029	PBX1	P40424	430 aa		13.57	□□□□□ -0.24
TMPO-212	ENST00000556029	C3orf67	Q6ZVT6	689 aa		13.57	□□□□□ -0.24
TMPO-212	ENST00000556029	CCDC63	Q8NA47	563 aa		13.57	□□□□□ -0.24
TMPO-212	ENST00000556029	SYNC	Q9H7C4	482 aa		13.57	□□□□□ -0.24
TMPO-212	ENST00000556029	PP2D1	A8MPX8	630 aa		13.56	□□□□□ -0.24
TMPO-212	ENST00000556029	C21orf2	O43822	256 aa		13.56	□□□□□ -0.24
TMPO-212	ENST00000556029	EVX2	Q03828	476 aa		13.56	□□□□□ -0.24
TMPO-212	ENST00000556029	NCAPH2	Q6IBW4	605 aa		13.56	□□□□□ -0.24
TMPO-212	ENST00000556029	GBP6	Q6ZN66	633 aa		13.56	□□□□□ -0.24
TMPO-212	ENST00000556029	DYM	Q7RTS9	669 aa		13.56	□□□□□ -0.24
TMPO-212	ENST00000556029	CCDC50	Q8IVM0	306 aa		13.56	□□□□□ -0.24
TMPO-212	ENST00000556029	CHP1	Q99653	195 aa		13.56	□□□□□ -0.24
TMPO-212	ENST00000556029	MRPL12	P52815	198 aa	Known RBP	13.56	□□□□□ -0.24
TMPO-212	ENST00000556029	GPSM2	P81274	684 aa		13.56	□□□□□ -0.24
TMPO-212	ENST00000556029	PDE4D	Q08499	809 aa		13.56	□□□□□ -0.24
TMPO-212	ENST00000556029	E2F4	Q16254	413 aa		13.56	□□□□□ -0.24
TMPO-212	ENST00000556029	MB21D1	Q8N884	522 aa		13.56	□□□□□ -0.24
TMPO-212	ENST00000556029	VEGFA	P15692	232 aa	Predicted RBP	13.56	□□□□□ -0.24
TMPO-212	ENST00000556029	NONO	Q15233	471 aa	Known RBP eCLIP	13.56	□□□□□ -0.24	5e-7	■■□□□ 13.6
TMPO-212	ENST00000556029	PAPPA	Q13219	1627 aa		13.56	□□□□□ -0.24
TMPO-212	ENST00000556029	TTC26	A0AVF1	554 aa		13.56	□□□□□ -0.24
TMPO-212	ENST00000556029	CFB	P00751	764 aa		13.56	□□□□□ -0.24
TMPO-212	ENST00000556029	TUBB	P07437	444 aa		13.56	□□□□□ -0.24
TMPO-212	ENST00000556029	KLHL7	Q8IXQ5	586 aa		13.56	□□□□□ -0.24
TMPO-212	ENST00000556029	TNFRSF25	Q93038	417 aa		13.56	□□□□□ -0.24
TMPO-212	ENST00000556029	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.55	□□□□□ -0.24
TMPO-212	ENST00000556029		B4DLN1	442 aa		13.55	□□□□□ -0.24
TMPO-212	ENST00000556029	TFRC	P02786	760 aa	Known RBP	13.55	□□□□□ -0.24
TMPO-212	ENST00000556029	PRR5L	Q6MZQ0	368 aa		13.55	□□□□□ -0.24
TMPO-212	ENST00000556029	KCTD1	Q719H9	257 aa		13.55	□□□□□ -0.24
TMPO-212	ENST00000556029	REXO1	Q8N1G1	1221 aa	Known RBP	13.55	□□□□□ -0.24
TMPO-212	ENST00000556029	JAKMIP2	Q96AA8	810 aa		13.55	□□□□□ -0.24
TMPO-212	ENST00000556029	HAUS4	Q9H6D7	363 aa		13.55	□□□□□ -0.24
TMPO-212	ENST00000556029	TBC1D7	Q9P0N9	293 aa		13.55	□□□□□ -0.24
TMPO-212	ENST00000556029	BAZ2B	Q9UIF8	2168 aa	Known RBP	13.55	□□□□□ -0.24
TMPO-212	ENST00000556029	EEF1G	P26641	437 aa	Known RBP	13.55	□□□□□ -0.24
TMPO-212	ENST00000556029	EN1	Q05925	392 aa	Predicted RBP	13.55	□□□□□ -0.24
TMPO-212	ENST00000556029	STAG2	Q8N3U4	1231 aa		13.55	□□□□□ -0.24
TMPO-212	ENST00000556029	PNKP	Q96T60	521 aa		13.55	□□□□□ -0.24
TMPO-212	ENST00000556029	ATP6V0A2	Q9Y487	856 aa		13.55	□□□□□ -0.24
TMPO-212	ENST00000556029	DNM2	P50570	870 aa		13.55	□□□□□ -0.24
TMPO-212	ENST00000556029	CABP7	Q86V35	215 aa		13.55	□□□□□ -0.24
TMPO-212	ENST00000556029	CERS3	Q8IU89	383 aa		13.55	□□□□□ -0.24
TMPO-212	ENST00000556029	MXD3	Q9BW11	206 aa		13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms