RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 TCP10L2B9ZVM9 353 aa27.21■■□□□ 1.95
TMEM260-207ENST00000555497 RAD17O75943 681 aa27.21■■□□□ 1.95
TMEM260-207ENST00000555497 KIAA0895Q8NCT3 520 aa27.21■■□□□ 1.95
TMEM260-207ENST00000555497 ANKRD20A12PQ8NF67 263 aa27.21■■□□□ 1.95
TMEM260-207ENST00000555497 THAP9Q9H5L6 903 aa27.21■■□□□ 1.95
TMEM260-207ENST00000555497 L2HGDHQ9H9P8 463 aa27.21■■□□□ 1.95
TMEM260-207ENST00000555497 MEIS2O14770 477 aa27.2■■□□□ 1.95
TMEM260-207ENST00000555497 TAL1P17542 331 aaPredicted RBP27.2■■□□□ 1.95
TMEM260-207ENST00000555497 RBM26Q5T8P6 1007 aaKnown RBP27.2■■□□□ 1.95
TMEM260-207ENST00000555497 ANKRD40Q6AI12 368 aa27.2■■□□□ 1.95
TMEM260-207ENST00000555497 LARP4BQ92615 738 aaKnown RBP27.2■■□□□ 1.95
TMEM260-207ENST00000555497 EEF2KMTQ96G04 330 aa27.2■■□□□ 1.95
TMEM260-207ENST00000555497 CLRN2A0PK11 232 aa27.2■■□□□ 1.94
TMEM260-207ENST00000555497 TUBB4AP04350 444 aa27.2■■□□□ 1.94
TMEM260-207ENST00000555497 SYCP1Q15431 976 aa27.2■■□□□ 1.94
TMEM260-207ENST00000555497 TMEM119Q4V9L6 283 aa27.2■■□□□ 1.94
TMEM260-207ENST00000555497 CCDC93Q567U6 631 aa27.2■■□□□ 1.94
TMEM260-207ENST00000555497 RSBN1LQ6PCB5 846 aaPredicted RBP27.2■■□□□ 1.94
TMEM260-207ENST00000555497 P2RX5Q93086 422 aa27.2■■□□□ 1.94
TMEM260-207ENST00000555497 GMCL1Q96IK5 515 aa27.2■■□□□ 1.94
TMEM260-207ENST00000555497 RAB34Q9BZG1 259 aa27.2■■□□□ 1.94
TMEM260-207ENST00000555497 SPDYE2BA6NHP3 402 aa27.19■■□□□ 1.94
TMEM260-207ENST00000555497 SPDYE6P0CI01 402 aa27.19■■□□□ 1.94
TMEM260-207ENST00000555497 CCNE1P24864 410 aa27.19■■□□□ 1.94
TMEM260-207ENST00000555497 TTLL6Q8N841 843 aa27.19■■□□□ 1.94
TMEM260-207ENST00000555497 RAD54LQ92698 747 aa27.19■■□□□ 1.94
TMEM260-207ENST00000555497 CCDC47Q96A33 483 aaKnown RBP27.19■■□□□ 1.94
TMEM260-207ENST00000555497 CDK5RAP3Q96JB5 506 aa27.19■■□□□ 1.94
TMEM260-207ENST00000555497 PSMD14O00487 310 aa27.18■■□□□ 1.94
TMEM260-207ENST00000555497 GCFC2P16383 781 aaKnown RBP27.18■■□□□ 1.94
TMEM260-207ENST00000555497 UBXN1Q04323 297 aa27.18■■□□□ 1.94
TMEM260-207ENST00000555497 KRT79Q5XKE5 535 aa27.18■■□□□ 1.94
TMEM260-207ENST00000555497 DYMQ7RTS9 669 aa27.18■■□□□ 1.94
TMEM260-207ENST00000555497 GMLQ99445 158 aa27.18■■□□□ 1.94
TMEM260-207ENST00000555497 ANO3Q9BYT9 981 aa27.18■■□□□ 1.94
TMEM260-207ENST00000555497 ZNF277Q9NRM2 450 aaPredicted RBP27.18■■□□□ 1.94
TMEM260-207ENST00000555497 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP27.18■■□□□ 1.94
TMEM260-207ENST00000555497 PHLPP2Q6ZVD8 1323 aa27.18■■□□□ 1.94
TMEM260-207ENST00000555497 COL2A1P02458 1487 aaPredicted RBP27.18■■□□□ 1.94
TMEM260-207ENST00000555497 KCNA3P22001 575 aa27.18■■□□□ 1.94
TMEM260-207ENST00000555497 MTERF4Q7Z6M4 381 aaKnown RBP27.18■■□□□ 1.94
TMEM260-207ENST00000555497 MRPL44Q9H9J2 332 aaKnown RBP27.18■■□□□ 1.94
TMEM260-207ENST00000555497 SLC39A2Q9NP94 309 aa27.18■■□□□ 1.94
TMEM260-207ENST00000555497 FECHP22830 423 aa27.17■■□□□ 1.94
TMEM260-207ENST00000555497 EEF1GP26641 437 aaKnown RBP27.17■■□□□ 1.94
TMEM260-207ENST00000555497 CSGALNACT2Q8N6G5 542 aa27.17■■□□□ 1.94
TMEM260-207ENST00000555497 ZNF507Q8TCN5 953 aa27.17■■□□□ 1.94
TMEM260-207ENST00000555497 ZBTB12Q9Y330 459 aaPredicted RBP27.17■■□□□ 1.94
TMEM260-207ENST00000555497 SMCHD1A6NHR9 2005 aa27.17■■□□□ 1.94
TMEM260-207ENST00000555497 SYDE2Q5VT97 1194 aa27.17■■□□□ 1.94
TMEM260-207ENST00000555497 CNGA4Q8IV77 575 aa27.17■■□□□ 1.94
TMEM260-207ENST00000555497 MB21D1Q8N884 522 aa27.17■■□□□ 1.94
TMEM260-207ENST00000555497 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.17■■□□□ 1.94
TMEM260-207ENST00000555497 NOL12Q9UGY1 213 aaKnown RBP eCLIP27.17■■□□□ 1.94
TMEM260-207ENST00000555497 PCDHA12Q9UN75 941 aa27.17■■□□□ 1.94
TMEM260-207ENST00000555497 V9GYY5 206 aaPredicted RBP27.17■■□□□ 1.94
TMEM260-207ENST00000555497 LGALS16A8MUM7 142 aa27.16■■□□□ 1.94
TMEM260-207ENST00000555497 VIL1P09327 827 aaKnown RBP27.16■■□□□ 1.94
TMEM260-207ENST00000555497 SPICE1Q8N0Z3 855 aa27.16■■□□□ 1.94
TMEM260-207ENST00000555497 LRRN4CLQ8ND94 238 aa27.16■■□□□ 1.94
TMEM260-207ENST00000555497 AMNQ9BXJ7 453 aa27.16■■□□□ 1.94
TMEM260-207ENST00000555497 NAA15Q9BXJ9 866 aaKnown RBP27.16■■□□□ 1.94
TMEM260-207ENST00000555497 GLT8D2Q9H1C3 349 aa27.16■■□□□ 1.94
TMEM260-207ENST00000555497 SEMA6BQ9H3T3 888 aa27.16■■□□□ 1.94
TMEM260-207ENST00000555497 ZNF70Q9UC06 446 aaPredicted RBP27.16■■□□□ 1.94
TMEM260-207ENST00000555497 A0A0U1RQJ8 604 aa27.16■■□□□ 1.94
TMEM260-207ENST00000555497 SLU7O95391 586 aaKnown RBP27.16■■□□□ 1.94
TMEM260-207ENST00000555497 BMP3P12645 472 aa27.16■■□□□ 1.94
TMEM260-207ENST00000555497 USH1GQ495M9 461 aa27.16■■□□□ 1.94
TMEM260-207ENST00000555497 KIAA1755Q5JYT7 1200 aa27.16■■□□□ 1.94
TMEM260-207ENST00000555497 CNNM4Q6P4Q7 775 aa27.16■■□□□ 1.94
TMEM260-207ENST00000555497 UNC13DQ70J99 1090 aa27.16■■□□□ 1.94
TMEM260-207ENST00000555497 ATRIPQ8WXE1 791 aa27.16■■□□□ 1.94
TMEM260-207ENST00000555497 CRYGNQ8WXF5 182 aa27.16■■□□□ 1.94
TMEM260-207ENST00000555497 ADGRG1Q9Y653 693 aa27.16■■□□□ 1.94
TMEM260-207ENST00000555497 DPEP1P16444 411 aa27.15■■□□□ 1.94
TMEM260-207ENST00000555497 ECE1P42892 770 aa27.15■■□□□ 1.94
TMEM260-207ENST00000555497 IKQ13123 557 aaPredicted RBP27.15■■□□□ 1.94
TMEM260-207ENST00000555497 COBLL1Q53SF7 1204 aa27.15■■□□□ 1.94
TMEM260-207ENST00000555497 LARGE2Q8N3Y3 721 aa27.15■■□□□ 1.94
TMEM260-207ENST00000555497 CCDC51Q96ER9 411 aa27.15■■□□□ 1.94
TMEM260-207ENST00000555497 WDR24Q96S15 920 aa27.15■■□□□ 1.94
TMEM260-207ENST00000555497 ABHD10Q9NUJ1 306 aa27.15■■□□□ 1.94
TMEM260-207ENST00000555497 NKRFO15226 690 aaKnown RBP eCLIP27.14■■□□□ 1.94
TMEM260-207ENST00000555497 MARCH6O60337 910 aa27.14■■□□□ 1.94
TMEM260-207ENST00000555497 USP11P51784 963 aa27.14■■□□□ 1.94
TMEM260-207ENST00000555497 FBXO11Q86XK2 927 aa27.14■■□□□ 1.94
TMEM260-207ENST00000555497 RTKN2Q8IZC4 609 aa27.14■■□□□ 1.94
TMEM260-207ENST00000555497 PSMD1Q99460 953 aa27.14■■□□□ 1.94
TMEM260-207ENST00000555497 KCNMB3Q9NPA1 279 aa27.14■■□□□ 1.94
TMEM260-207ENST00000555497 PVALEFA0A1B0GWK0 134 aa27.14■■□□□ 1.94
TMEM260-207ENST00000555497 ERVK-24P63145 666 aa27.14■■□□□ 1.94
TMEM260-207ENST00000555497 NOC3LQ8WTT2 800 aaKnown RBP27.14■■□□□ 1.94
TMEM260-207ENST00000555497 DDX12PQ92771 950 aa27.14■■□□□ 1.94
TMEM260-207ENST00000555497 ERO1AQ96HE7 468 aa27.14■■□□□ 1.94
TMEM260-207ENST00000555497 MBOAT7Q96N66 472 aa27.14■■□□□ 1.94
TMEM260-207ENST00000555497 CNTNAP1P78357 1384 aa27.14■■□□□ 1.93
TMEM260-207ENST00000555497 CYP3A7-CYP3A51PA0A087WV96 503 aa27.13■■□□□ 1.93
TMEM260-207ENST00000555497 BICDL2A1A5D9 508 aa27.13■■□□□ 1.93
TMEM260-207ENST00000555497 OPLAHO14841 1288 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms