RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 RAPGEF1Q13905 1077 aa9.22□□□□□ -0.93
LINC00641-201ENST00000555379 EFCAB13Q8IY85 973 aa9.22□□□□□ -0.93
LINC00641-201ENST00000555379 TRMT2AQ8IZ69 625 aaKnown RBP9.22□□□□□ -0.93
LINC00641-201ENST00000555379 ZNF512BQ96KM6 892 aaPredicted RBP9.22□□□□□ -0.93
LINC00641-201ENST00000555379 GSDMAQ96QA5 445 aa9.22□□□□□ -0.93
LINC00641-201ENST00000555379 RAB17Q9H0T7 212 aa9.22□□□□□ -0.93
LINC00641-201ENST00000555379 ARMCX3Q9UH62 379 aaPredicted RBP9.22□□□□□ -0.93
LINC00641-201ENST00000555379 SETD1BQ9UPS6 1966 aaKnown RBP9.22□□□□□ -0.93
LINC00641-201ENST00000555379 UBXN2AP68543 259 aa9.22□□□□□ -0.93
LINC00641-201ENST00000555379 TSHZ3Q63HK5 1081 aa9.22□□□□□ -0.93
LINC00641-201ENST00000555379 CCHCR1Q8TD31 782 aa9.22□□□□□ -0.93
LINC00641-201ENST00000555379 ATP2A3Q93084 1043 aa9.22□□□□□ -0.93
LINC00641-201ENST00000555379 IRAK4Q9NWZ3 460 aa9.22□□□□□ -0.93
LINC00641-201ENST00000555379 USH1CQ9Y6N9 552 aa9.22□□□□□ -0.93
LINC00641-201ENST00000555379 SPATA31A1Q5TZJ5 1347 aa9.22□□□□□ -0.93
LINC00641-201ENST00000555379 NRKQ7Z2Y5 1582 aa9.22□□□□□ -0.93
LINC00641-201ENST00000555379 STXBP3O00186 592 aa9.22□□□□□ -0.93
LINC00641-201ENST00000555379 ARHGAP6O43182 974 aa9.22□□□□□ -0.93
LINC00641-201ENST00000555379 SLC8A1P32418 973 aa9.22□□□□□ -0.93
LINC00641-201ENST00000555379 GOLGA8FQ08AF8 430 aa9.22□□□□□ -0.93
LINC00641-201ENST00000555379 GOLGA8DPQ0D2H9 430 aa9.22□□□□□ -0.93
LINC00641-201ENST00000555379 ZNF569Q5MCW4 686 aa9.22□□□□□ -0.93
LINC00641-201ENST00000555379 BZW1Q7L1Q6 419 aaKnown RBP9.22□□□□□ -0.93
LINC00641-201ENST00000555379 TYW1Q9NV66 732 aaKnown RBP9.22□□□□□ -0.93
LINC00641-201ENST00000555379 RIPOR2Q9Y4F9 1068 aa9.22□□□□□ -0.93
LINC00641-201ENST00000555379 TNNI1P19237 187 aa9.22□□□□□ -0.93
LINC00641-201ENST00000555379 PPARGP37231 505 aaPredicted RBP9.22□□□□□ -0.93
LINC00641-201ENST00000555379 POLA2Q14181 598 aa9.22□□□□□ -0.93
LINC00641-201ENST00000555379 USH1GQ495M9 461 aa9.22□□□□□ -0.93
LINC00641-201ENST00000555379 MAP4K1Q92918 833 aa9.22□□□□□ -0.93
LINC00641-201ENST00000555379 SLF1Q9BQI6 1058 aa9.22□□□□□ -0.93
LINC00641-201ENST00000555379 TRPV6Q9H1D0 765 aa9.22□□□□□ -0.93
LINC00641-201ENST00000555379 TOPORSQ9NS56 1045 aaPredicted RBP9.22□□□□□ -0.93
LINC00641-201ENST00000555379 GEMIN8Q9NWZ8 242 aaKnown RBP9.22□□□□□ -0.93
LINC00641-201ENST00000555379 TTC36A6NLP5 189 aa9.21□□□□□ -0.93
LINC00641-201ENST00000555379 CYP2E1P05181 493 aaPredicted RBP9.21□□□□□ -0.93
LINC00641-201ENST00000555379 BCAMP50895 628 aa9.21□□□□□ -0.93
LINC00641-201ENST00000555379 LACTBP83111 547 aaPredicted RBP9.21□□□□□ -0.93
LINC00641-201ENST00000555379 CTDSPL2Q05D32 466 aa9.21□□□□□ -0.93
LINC00641-201ENST00000555379 PRPSAP1Q14558 356 aa9.21□□□□□ -0.93
LINC00641-201ENST00000555379 KRT24Q2M2I5 525 aa9.21□□□□□ -0.93
LINC00641-201ENST00000555379 TSNAXIP1Q2TAA8 658 aa9.21□□□□□ -0.93
LINC00641-201ENST00000555379 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.21□□□□□ -0.93
LINC00641-201ENST00000555379 PNMA6EA0A0J9YXQ4 647 aa9.21□□□□□ -0.93
LINC00641-201ENST00000555379 IFNAR1P17181 557 aa9.21□□□□□ -0.93
LINC00641-201ENST00000555379 PDE6CP51160 858 aa9.21□□□□□ -0.93
LINC00641-201ENST00000555379 MAP3K7CLP57077 242 aa9.21□□□□□ -0.93
LINC00641-201ENST00000555379 STRIP1Q5VSL9 837 aa9.21□□□□□ -0.93
LINC00641-201ENST00000555379 RUFY4Q6ZNE9 571 aa9.21□□□□□ -0.93
LINC00641-201ENST00000555379 NUDT18Q6ZVK8 323 aa9.21□□□□□ -0.93
LINC00641-201ENST00000555379 EFHBQ8N7U6 833 aa9.21□□□□□ -0.93
LINC00641-201ENST00000555379 LEO1Q8WVC0 666 aaPredicted RBP9.21□□□□□ -0.93
LINC00641-201ENST00000555379 FAM20AQ96MK3 541 aa9.21□□□□□ -0.93
LINC00641-201ENST00000555379 PARK7Q99497 189 aaKnown RBP9.21□□□□□ -0.93
LINC00641-201ENST00000555379 BAG1Q99933 345 aaPredicted RBP9.21□□□□□ -0.93
LINC00641-201ENST00000555379 ISCA1Q9BUE6 129 aa9.21□□□□□ -0.93
LINC00641-201ENST00000555379 NKIRAS1Q9NYS0 192 aa9.21□□□□□ -0.93
LINC00641-201ENST00000555379 TBC1D7Q9P0N9 293 aa9.21□□□□□ -0.93
LINC00641-201ENST00000555379 SEL1LQ9UBV2 794 aa9.21□□□□□ -0.93
LINC00641-201ENST00000555379 ZNRF3Q9ULT6 936 aa9.21□□□□□ -0.93
LINC00641-201ENST00000555379 CTNND2Q9UQB3 1225 aa9.21□□□□□ -0.93
LINC00641-201ENST00000555379 PDCD2Q16342 344 aaPredicted RBP9.21□□□□□ -0.94
LINC00641-201ENST00000555379 DOK7Q18PE1 504 aa9.21□□□□□ -0.94
LINC00641-201ENST00000555379 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.21□□□□□ -0.94
LINC00641-201ENST00000555379 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.21□□□□□ -0.94
LINC00641-201ENST00000555379 HOMER3Q9NSC5 361 aa9.21□□□□□ -0.94
LINC00641-201ENST00000555379 UTP11Q9Y3A2 253 aaKnown RBP9.21□□□□□ -0.94
LINC00641-201ENST00000555379 PNPLA6Q8IY17 1366 aa9.21□□□□□ -0.94
LINC00641-201ENST00000555379 ABCA6Q8N139 1617 aa9.21□□□□□ -0.94
LINC00641-201ENST00000555379 ITSN1Q15811 1721 aa9.21□□□□□ -0.94
LINC00641-201ENST00000555379 LMNB1P20700 586 aa9.21□□□□□ -0.94
LINC00641-201ENST00000555379 EEF1GP26641 437 aaKnown RBP9.21□□□□□ -0.94
LINC00641-201ENST00000555379 PHBP35232 272 aa9.21□□□□□ -0.94
LINC00641-201ENST00000555379 SP4Q02446 784 aa9.21□□□□□ -0.94
LINC00641-201ENST00000555379 ARID5AQ03989 594 aa9.21□□□□□ -0.94
LINC00641-201ENST00000555379 ITIH3Q06033 890 aa9.21□□□□□ -0.94
LINC00641-201ENST00000555379 ASPHQ12797 758 aa9.21□□□□□ -0.94
LINC00641-201ENST00000555379 SF3B3Q15393 1217 aaKnown RBP9.21□□□□□ -0.94
LINC00641-201ENST00000555379 STXBP2Q15833 593 aa9.21□□□□□ -0.94
LINC00641-201ENST00000555379 FAM26FQ5R3K3 315 aa9.21□□□□□ -0.94
LINC00641-201ENST00000555379 RINT1Q6NUQ1 792 aa9.21□□□□□ -0.94
LINC00641-201ENST00000555379 TPH2Q8IWU9 490 aa9.21□□□□□ -0.94
LINC00641-201ENST00000555379 TRMT44Q8IYL2 757 aaKnown RBP9.21□□□□□ -0.94
LINC00641-201ENST00000555379 PPP1R9BQ96SB3 815 aa9.21□□□□□ -0.94
LINC00641-201ENST00000555379 TRIM7Q9C029 511 aa9.21□□□□□ -0.94
LINC00641-201ENST00000555379 USP17L15C9J2P7 530 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 USP17L13C9JLJ4 530 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 USP17L11C9JVI0 530 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 USP17L18D6R9N7 530 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 USP17L22D6RA61 530 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 USP17L17D6RBQ6 530 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 USP17L19D6RCP7 530 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 USP17L20D6RJB6 530 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 K7ENM7 598 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 RIOK3O14730 519 aaKnown RBP9.2□□□□□ -0.94
LINC00641-201ENST00000555379 SLC25A27O95847 323 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 KPNA2P52292 529 aaKnown RBP9.2□□□□□ -0.94
LINC00641-201ENST00000555379 USP17L24Q0WX57 530 aa9.2□□□□□ -0.94
LINC00641-201ENST00000555379 ZYXQ15942 572 aaKnown RBP9.2□□□□□ -0.94
LINC00641-201ENST00000555379 FAM102BQ5T8I3 360 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms