RNA–Protein interactions for RNA: ENST00000555309.5

HNRNPC-219, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-219ENST00000555309 SH2B2O14492 632 aaPredicted RBP11.63□□□□□ -0.55
HNRNPC-219ENST00000555309 DYNC1LI2O43237 492 aaPredicted RBP11.63□□□□□ -0.55
HNRNPC-219ENST00000555309 CPA1P15085 419 aa11.63□□□□□ -0.55
HNRNPC-219ENST00000555309 GJA9P57773 515 aa11.63□□□□□ -0.55
HNRNPC-219ENST00000555309 SNX17Q15036 470 aa11.63□□□□□ -0.55
HNRNPC-219ENST00000555309 GNASQ5JWF2 1037 aa11.63□□□□□ -0.55
HNRNPC-219ENST00000555309 RUFY3Q7L099 469 aa11.63□□□□□ -0.55
HNRNPC-219ENST00000555309 ZSCAN31Q96LW9 406 aaPredicted RBP11.63□□□□□ -0.55
HNRNPC-219ENST00000555309 UPF3AQ9H1J1 476 aaKnown RBP11.63□□□□□ -0.55
HNRNPC-219ENST00000555309 PRDM5Q9NQX1 630 aaPredicted RBP11.63□□□□□ -0.55
HNRNPC-219ENST00000555309 LIMCH1Q9UPQ0 1083 aa11.63□□□□□ -0.55
HNRNPC-219ENST00000555309 hCG_1642624A0A1W2PR95 340 aa11.63□□□□□ -0.55
HNRNPC-219ENST00000555309 ERICH2A1L162 156 aa11.63□□□□□ -0.55
HNRNPC-219ENST00000555309 ZBTB5O15062 677 aa11.63□□□□□ -0.55
HNRNPC-219ENST00000555309 PQBP1O60828 265 aaKnown RBP11.63□□□□□ -0.55
HNRNPC-219ENST00000555309 ARIH2O95376 493 aa11.63□□□□□ -0.55
HNRNPC-219ENST00000555309 PLEKHA8P1O95397 391 aa11.63□□□□□ -0.55
HNRNPC-219ENST00000555309 HOXA13P31271 388 aaPredicted RBP11.63□□□□□ -0.55
HNRNPC-219ENST00000555309 CXCL17Q6UXB2 119 aa11.63□□□□□ -0.55
HNRNPC-219ENST00000555309 TLK2Q86UE8 772 aa11.63□□□□□ -0.55
HNRNPC-219ENST00000555309 ZNF654Q8IZM8 581 aa11.63□□□□□ -0.55
HNRNPC-219ENST00000555309 LRCH3Q96II8 777 aa11.63□□□□□ -0.55
HNRNPC-219ENST00000555309 RIOX1Q9H6W3 641 aa11.63□□□□□ -0.55
HNRNPC-219ENST00000555309 PDLIM7Q9NR12 457 aa11.63□□□□□ -0.55
HNRNPC-219ENST00000555309 SH2B1Q9NRF2 756 aaPredicted RBP11.63□□□□□ -0.55
HNRNPC-219ENST00000555309 CYP46A1Q9Y6A2 500 aa11.63□□□□□ -0.55
HNRNPC-219ENST00000555309 MYH6P13533 1939 aa11.62□□□□□ -0.55
HNRNPC-219ENST00000555309 ABCB11O95342 1321 aa11.62□□□□□ -0.55
HNRNPC-219ENST00000555309 CFBP00751 764 aa11.62□□□□□ -0.55
HNRNPC-219ENST00000555309 CASTP20810 708 aaKnown RBP11.62□□□□□ -0.55
HNRNPC-219ENST00000555309 EDNRBP24530 442 aa11.62□□□□□ -0.55
HNRNPC-219ENST00000555309 AK2P54819 239 aa11.62□□□□□ -0.55
HNRNPC-219ENST00000555309 SKOR2Q2VWA4 1001 aaPredicted RBP11.62□□□□□ -0.55
HNRNPC-219ENST00000555309 JAKMIP1Q96N16 626 aaKnown RBP11.62□□□□□ -0.55
HNRNPC-219ENST00000555309 WDR11Q9BZH6 1224 aa11.62□□□□□ -0.55
HNRNPC-219ENST00000555309 STARD7Q9NQZ5 370 aa11.62□□□□□ -0.55
HNRNPC-219ENST00000555309 FOXD4L1Q9NU39 408 aa11.62□□□□□ -0.55
HNRNPC-219ENST00000555309 PCDHA1Q9Y5I3 950 aa11.62□□□□□ -0.55
HNRNPC-219ENST00000555309 GRIN2DO15399 1336 aa11.61□□□□□ -0.55
HNRNPC-219ENST00000555309 GOLGA6L22H0YM25 854 aa11.61□□□□□ -0.55
HNRNPC-219ENST00000555309 EIF2AK2P19525 551 aaKnown RBP11.61□□□□□ -0.55
HNRNPC-219ENST00000555309 CST5P28325 142 aaPredicted RBP11.61□□□□□ -0.55
HNRNPC-219ENST00000555309 MCM5P33992 734 aa11.61□□□□□ -0.55
HNRNPC-219ENST00000555309 PSMC6P62333 389 aa11.61□□□□□ -0.55
HNRNPC-219ENST00000555309 SART3Q15020 963 aaKnown RBP11.61□□□□□ -0.55
HNRNPC-219ENST00000555309 ANKRD1Q15327 319 aa11.61□□□□□ -0.55
HNRNPC-219ENST00000555309 CATIPQ7Z7H3 387 aa11.61□□□□□ -0.55
HNRNPC-219ENST00000555309 CCDC82Q8N4S0 544 aa11.61□□□□□ -0.55
HNRNPC-219ENST00000555309 SRBD1Q8N5C6 995 aaKnown RBP11.61□□□□□ -0.55
HNRNPC-219ENST00000555309 RGS22Q8NE09 1264 aa11.61□□□□□ -0.55
HNRNPC-219ENST00000555309 BADQ92934 168 aa11.61□□□□□ -0.55
HNRNPC-219ENST00000555309 TSEN34Q9BSV6 310 aaKnown RBP11.61□□□□□ -0.55
HNRNPC-219ENST00000555309 AMNQ9BXJ7 453 aa11.61□□□□□ -0.55
HNRNPC-219ENST00000555309 VTA1Q9NP79 307 aa11.61□□□□□ -0.55
HNRNPC-219ENST00000555309 PDRG1Q9NUG6 133 aa11.61□□□□□ -0.55
HNRNPC-219ENST00000555309 ADD3Q9UEY8 706 aaKnown RBP11.61□□□□□ -0.55
HNRNPC-219ENST00000555309 RBM47A0AV96 593 aaKnown RBP11.6□□□□□ -0.55
HNRNPC-219ENST00000555309 BAG4O95429 457 aaKnown RBP11.6□□□□□ -0.55
HNRNPC-219ENST00000555309 BRD1O95696 1058 aa11.6□□□□□ -0.55
HNRNPC-219ENST00000555309 PDIA4P13667 645 aaKnown RBP11.6□□□□□ -0.55
HNRNPC-219ENST00000555309 EXOSC10Q01780 885 aaKnown RBP11.6□□□□□ -0.55
HNRNPC-219ENST00000555309 PDE4DQ08499 809 aa11.6□□□□□ -0.55
HNRNPC-219ENST00000555309 FAAP100Q0VG06 881 aa11.6□□□□□ -0.55
HNRNPC-219ENST00000555309 FSCN1Q16658 493 aaKnown RBP11.6□□□□□ -0.55
HNRNPC-219ENST00000555309 IQSEC1Q6DN90 963 aa11.6□□□□□ -0.55
HNRNPC-219ENST00000555309 NFXL1Q6ZNB6 911 aa11.6□□□□□ -0.55
HNRNPC-219ENST00000555309 VTI1AQ96AJ9 217 aa11.6□□□□□ -0.55
HNRNPC-219ENST00000555309 RMDN3Q96TC7 470 aa11.6□□□□□ -0.55
HNRNPC-219ENST00000555309 UBE2OQ9C0C9 1292 aaKnown RBP11.6□□□□□ -0.55
HNRNPC-219ENST00000555309 BRPF3Q9ULD4 1205 aa11.6□□□□□ -0.55
HNRNPC-219ENST00000555309 MRPL11Q9Y3B7 192 aaKnown RBP11.6□□□□□ -0.55
HNRNPC-219ENST00000555309 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.6□□□□□ -0.55
HNRNPC-219ENST00000555309 MOXD2PA6NHM9 499 aa11.6□□□□□ -0.55
HNRNPC-219ENST00000555309 RPS6KB1P23443 525 aa11.6□□□□□ -0.55
HNRNPC-219ENST00000555309 BMP8BP34820 402 aa11.6□□□□□ -0.55
HNRNPC-219ENST00000555309 CDK7P50613 346 aa11.6□□□□□ -0.55
HNRNPC-219ENST00000555309 HSD17B4P51659 736 aa11.6□□□□□ -0.55
HNRNPC-219ENST00000555309 EPHB4P54760 987 aa11.6□□□□□ -0.55
HNRNPC-219ENST00000555309 NKX3-2P78367 333 aa11.6□□□□□ -0.55
HNRNPC-219ENST00000555309 DUSP28Q4G0W2 176 aa11.6□□□□□ -0.55
HNRNPC-219ENST00000555309 C1orf53Q5VUE5 145 aa11.6□□□□□ -0.55
HNRNPC-219ENST00000555309 SEPT14Q6ZU15 432 aa11.6□□□□□ -0.55
HNRNPC-219ENST00000555309 DNERQ8NFT8 737 aa11.6□□□□□ -0.55
HNRNPC-219ENST00000555309 IL31RAQ8NI17 732 aa11.6□□□□□ -0.55
HNRNPC-219ENST00000555309 NEK1Q96PY6 1258 aa11.6□□□□□ -0.55
HNRNPC-219ENST00000555309 ZDHHC9Q9Y397 364 aa11.6□□□□□ -0.55
HNRNPC-219ENST00000555309 PNMA6FA0A0J9YX94 578 aa11.59□□□□□ -0.55
HNRNPC-219ENST00000555309 CCDC69A6NI79 296 aa11.59□□□□□ -0.55
HNRNPC-219ENST00000555309 TRAK2O60296 914 aa11.59□□□□□ -0.55
HNRNPC-219ENST00000555309 SORBS3O60504 671 aa11.59□□□□□ -0.55
HNRNPC-219ENST00000555309 HMGB1P09429 215 aaKnown RBP11.59□□□□□ -0.55
HNRNPC-219ENST00000555309 LY6KQ17RY6 165 aa11.59□□□□□ -0.55
HNRNPC-219ENST00000555309 C9orf50Q5SZB4 431 aa11.59□□□□□ -0.55
HNRNPC-219ENST00000555309 BLOC1S2Q6QNY1 142 aa11.59□□□□□ -0.55
HNRNPC-219ENST00000555309 GPKOWQ92917 476 aaPredicted RBP eCLIP11.59□□□□□ -0.555e-6■■□□□ 13.3
HNRNPC-219ENST00000555309 GLT1D1Q96MS3 346 aa11.59□□□□□ -0.55
HNRNPC-219ENST00000555309 AP5M1Q9H0R1 490 aa11.59□□□□□ -0.55
HNRNPC-219ENST00000555309 SPC25Q9HBM1 224 aa11.59□□□□□ -0.55
HNRNPC-219ENST00000555309 PNMA2Q9UL42 364 aa11.59□□□□□ -0.55
HNRNPC-219ENST00000555309 LTBP2Q14767 1821 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms