RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 ARHGEF39Q8N4T4 335 aa8.37□□□□□ -1.07
VRK1-203ENST00000555067 FGD4Q96M96 766 aa8.37□□□□□ -1.07
VRK1-203ENST00000555067 C1QTNF3Q9BXJ4 246 aa8.37□□□□□ -1.07
VRK1-203ENST00000555067 TGIF2Q9GZN2 237 aa8.37□□□□□ -1.07
VRK1-203ENST00000555067 DBR1Q9UK59 544 aaKnown RBP8.37□□□□□ -1.07
VRK1-203ENST00000555067 SUGT1Q9Y2Z0 365 aa8.37□□□□□ -1.07
VRK1-203ENST00000555067 TRBV23OR9-2A0A075B6M9 112 aa8.36□□□□□ -1.07
VRK1-203ENST00000555067 RBM25P49756 843 aaKnown RBP8.36□□□□□ -1.07
VRK1-203ENST00000555067 DPY19L1Q2PZI1 675 aa8.36□□□□□ -1.07
VRK1-203ENST00000555067 CARFQ8N187 725 aa8.36□□□□□ -1.07
VRK1-203ENST00000555067 ANKRD34BA5PLL1 514 aa8.35□□□□□ -1.07
VRK1-203ENST00000555067 C2orf71A6NGG8 1288 aa8.35□□□□□ -1.07
VRK1-203ENST00000555067 F8W031 263 aaPredicted RBP8.35□□□□□ -1.07
VRK1-203ENST00000555067 VAMP4O75379 141 aa8.35□□□□□ -1.07
VRK1-203ENST00000555067 GLI4P10075 376 aa8.35□□□□□ -1.07
VRK1-203ENST00000555067 NAT2P11245 290 aa8.35□□□□□ -1.07
VRK1-203ENST00000555067 C9orf131Q5VYM1 1079 aa8.35□□□□□ -1.07
VRK1-203ENST00000555067 CPZQ66K79 652 aa8.35□□□□□ -1.07
VRK1-203ENST00000555067 VHLLQ6RSH7 139 aa8.35□□□□□ -1.07
VRK1-203ENST00000555067 CRACR2BQ8N4Y2 399 aaPredicted RBP8.35□□□□□ -1.07
VRK1-203ENST00000555067 SLC16A11Q8NCK7 471 aa8.35□□□□□ -1.07
VRK1-203ENST00000555067 NCAM1P13591 858 aa8.34□□□□□ -1.07
VRK1-203ENST00000555067 PAMP19021 973 aa8.34□□□□□ -1.07
VRK1-203ENST00000555067 ZNF143P52747 638 aaPredicted RBP8.34□□□□□ -1.07
VRK1-203ENST00000555067 PRR5P85299 388 aa8.34□□□□□ -1.07
VRK1-203ENST00000555067 KIAA1211LQ6NV74 962 aa8.34□□□□□ -1.07
VRK1-203ENST00000555067 LZTR1Q8N653 840 aa8.34□□□□□ -1.07
VRK1-203ENST00000555067 NETO2Q8NC67 525 aa8.34□□□□□ -1.07
VRK1-203ENST00000555067 DDX1Q92499 740 aaKnown RBP8.34□□□□□ -1.07
VRK1-203ENST00000555067 KIAA1522Q9P206 1035 aaPredicted RBP8.34□□□□□ -1.07
VRK1-203ENST00000555067 NUDT5Q9UKK9 219 aa8.34□□□□□ -1.07
VRK1-203ENST00000555067 SHROOM4Q9ULL8 1493 aa8.33□□□□□ -1.08
VRK1-203ENST00000555067 MC3RP41968 323 aa8.33□□□□□ -1.08
VRK1-203ENST00000555067 TTC9BQ8N6N2 239 aa8.33□□□□□ -1.08
VRK1-203ENST00000555067 TSPAN17Q96FV3 270 aa8.33□□□□□ -1.08
VRK1-203ENST00000555067 CCSER2Q9H7U1 834 aa8.33□□□□□ -1.08
VRK1-203ENST00000555067 SRRDQ9UH36 339 aa8.33□□□□□ -1.08
VRK1-203ENST00000555067 INPP5FQ9Y2H2 1132 aa8.33□□□□□ -1.08
VRK1-203ENST00000555067 FAN1Q9Y2M0 1017 aa8.33□□□□□ -1.08
VRK1-203ENST00000555067 ASGR2P07307 311 aa8.32□□□□□ -1.08
VRK1-203ENST00000555067 GJA9P57773 515 aa8.32□□□□□ -1.08
VRK1-203ENST00000555067 POMZP3Q6PJE2 187 aa8.32□□□□□ -1.08
VRK1-203ENST00000555067 B3GNT8Q7Z7M8 397 aa8.32□□□□□ -1.08
VRK1-203ENST00000555067 ALG3Q92685 438 aa8.32□□□□□ -1.08
VRK1-203ENST00000555067 AKT3Q9Y243 479 aa8.32□□□□□ -1.08
VRK1-203ENST00000555067 RWDD3Q9Y3V2 267 aa8.32□□□□□ -1.08
VRK1-203ENST00000555067 NPHP3-ACAD11A0A0J9YXS1 232 aa8.31□□□□□ -1.08
VRK1-203ENST00000555067 FAM169BQ8N8A8 192 aa8.31□□□□□ -1.08
VRK1-203ENST00000555067 ZNF513Q8N8E2 541 aaPredicted RBP8.31□□□□□ -1.08
VRK1-203ENST00000555067 PEX11GQ96HA9 241 aa8.31□□□□□ -1.08
VRK1-203ENST00000555067 SAMD11Q96NU1 681 aa8.31□□□□□ -1.08
VRK1-203ENST00000555067 SORCS2Q96PQ0 1159 aa8.31□□□□□ -1.08
VRK1-203ENST00000555067 ACBD3Q9H3P7 528 aa8.31□□□□□ -1.08
VRK1-203ENST00000555067 ZNF20P17024 532 aa8.3□□□□□ -1.08
VRK1-203ENST00000555067 SLC9A5Q14940 896 aa8.3□□□□□ -1.08
VRK1-203ENST00000555067 NCAPHQ15003 741 aa8.3□□□□□ -1.08
VRK1-203ENST00000555067 CPNE8Q86YQ8 564 aa8.3□□□□□ -1.08
VRK1-203ENST00000555067 BVESQ8NE79 360 aa8.3□□□□□ -1.08
VRK1-203ENST00000555067 APBA2Q99767 749 aa8.3□□□□□ -1.08
VRK1-203ENST00000555067 MTA3Q9BTC8 594 aa8.3□□□□□ -1.08
VRK1-203ENST00000555067 APEX2Q9UBZ4 518 aa8.3□□□□□ -1.08
VRK1-203ENST00000555067 EMC9Q9Y3B6 208 aa8.3□□□□□ -1.08
VRK1-203ENST00000555067 NPHS1O60500 1241 aa8.29□□□□□ -1.08
VRK1-203ENST00000555067 WWC2Q6AWC2 1192 aa8.29□□□□□ -1.08
VRK1-203ENST00000555067 ZNF761Q86XN6 746 aaPredicted RBP8.29□□□□□ -1.08
VRK1-203ENST00000555067 COPS5Q92905 334 aa8.29□□□□□ -1.08
VRK1-203ENST00000555067 SPATA6Q9NWH7 488 aaPredicted RBP8.29□□□□□ -1.08
VRK1-203ENST00000555067 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.29□□□□□ -1.08
VRK1-203ENST00000555067 GULP1Q9UBP9 304 aa8.29□□□□□ -1.08
VRK1-203ENST00000555067 UNCXA6NJT0 531 aa8.28□□□□□ -1.08
VRK1-203ENST00000555067 NOP56O00567 594 aaKnown RBP8.28□□□□□ -1.08
VRK1-203ENST00000555067 KCNH1O95259 989 aa8.28□□□□□ -1.08
VRK1-203ENST00000555067 ZBTB7AO95365 584 aa8.28□□□□□ -1.08
VRK1-203ENST00000555067 FSHBP01225 129 aa8.28□□□□□ -1.08
VRK1-203ENST00000555067 ANAPC16Q96DE5 110 aa8.28□□□□□ -1.08
VRK1-203ENST00000555067 C7orf72A4D263 438 aa8.27□□□□□ -1.09
VRK1-203ENST00000555067 OVOL3O00110 214 aa8.27□□□□□ -1.09
VRK1-203ENST00000555067 ATF4P18848 351 aaPredicted RBP8.27□□□□□ -1.09
VRK1-203ENST00000555067 PMLP29590 882 aa8.27□□□□□ -1.09
VRK1-203ENST00000555067 SCRN1Q12765 414 aa8.27□□□□□ -1.09
VRK1-203ENST00000555067 USP33Q8TEY7 942 aa8.27□□□□□ -1.09
VRK1-203ENST00000555067 C8orf49Q96NF6 230 aa8.27□□□□□ -1.09
VRK1-203ENST00000555067 NOX5Q96PH1 765 aa8.27□□□□□ -1.09
VRK1-203ENST00000555067 MMP19Q99542 508 aa8.27□□□□□ -1.09
VRK1-203ENST00000555067 FBLN5Q9UBX5 448 aa8.27□□□□□ -1.09
VRK1-203ENST00000555067 SARSP49591 514 aaKnown RBP8.26□□□□□ -1.09
VRK1-203ENST00000555067 KRTAP1-1Q07627 177 aa8.26□□□□□ -1.09
VRK1-203ENST00000555067 TBC1D10BQ4KMP7 808 aaPredicted RBP8.26□□□□□ -1.09
VRK1-203ENST00000555067 TRIM59Q8IWR1 403 aa8.26□□□□□ -1.09
VRK1-203ENST00000555067 CPA5Q8WXQ8 436 aa8.26□□□□□ -1.09
VRK1-203ENST00000555067 RXFP1Q9HBX9 757 aa8.26□□□□□ -1.09
VRK1-203ENST00000555067 CLEC1BQ9P126 229 aa8.26□□□□□ -1.09
VRK1-203ENST00000555067 E9PSI1 815 aa8.25□□□□□ -1.09
VRK1-203ENST00000555067 PLATP00750 562 aa8.25□□□□□ -1.09
VRK1-203ENST00000555067 TNNI3KQ59H18 835 aa8.25□□□□□ -1.09
VRK1-203ENST00000555067 DCP2Q8IU60 420 aaKnown RBP8.25□□□□□ -1.09
VRK1-203ENST00000555067 SSBP3Q9BWW4 388 aaPredicted RBP8.25□□□□□ -1.09
VRK1-203ENST00000555067 SCAND2PQ9GZW5 306 aaPredicted RBP8.25□□□□□ -1.09
VRK1-203ENST00000555067 CAPN10Q9HC96 672 aa8.25□□□□□ -1.09
VRK1-203ENST00000555067 CYP26B1Q9NR63 512 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms