RNA–Protein interactions for RNA: ENST00000554929.1

SRSF5-208, Transcript of serine and arginine rich splicing factor 5, human

TSL 2

Gene SRSF5, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRSF5-208	ENST00000554929	ATP2A2	P16615	1042 aa	Known RBP	11.99	□□□□□ -0.49
SRSF5-208	ENST00000554929	ERCC3	P19447	782 aa		11.99	□□□□□ -0.49
SRSF5-208	ENST00000554929	MCM5	P33992	734 aa		11.99	□□□□□ -0.49
SRSF5-208	ENST00000554929	FGD1	P98174	961 aa		11.99	□□□□□ -0.49
SRSF5-208	ENST00000554929	ST3GAL1	Q11201	340 aa		11.99	□□□□□ -0.49
SRSF5-208	ENST00000554929	TTF1	Q15361	905 aa	Predicted RBP	11.99	□□□□□ -0.49
SRSF5-208	ENST00000554929	TMEM67	Q5HYA8	995 aa		11.99	□□□□□ -0.49
SRSF5-208	ENST00000554929		Q6ZUG5	572 aa		11.99	□□□□□ -0.49
SRSF5-208	ENST00000554929	HFE2	Q6ZVN8	426 aa		11.99	□□□□□ -0.49
SRSF5-208	ENST00000554929	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	11.99	□□□□□ -0.49
SRSF5-208	ENST00000554929	NECAB1	Q8N987	351 aa		11.99	□□□□□ -0.49
SRSF5-208	ENST00000554929	XAGE2	Q96GT9	111 aa		11.99	□□□□□ -0.49
SRSF5-208	ENST00000554929	GLT1D1	Q96MS3	346 aa		11.99	□□□□□ -0.49
SRSF5-208	ENST00000554929	AGXT2	Q9BYV1	514 aa		11.99	□□□□□ -0.49
SRSF5-208	ENST00000554929	TSR3	Q9UJK0	312 aa	Known RBP	11.99	□□□□□ -0.49
SRSF5-208	ENST00000554929	WDFY4	Q6ZS81	3184 aa		11.99	□□□□□ -0.49
SRSF5-208	ENST00000554929	MOXD2P	A6NHM9	499 aa		11.98	□□□□□ -0.49
SRSF5-208	ENST00000554929	TLR3	O15455	904 aa	Known RBP	11.98	□□□□□ -0.49
SRSF5-208	ENST00000554929	GFRA3	O60609	400 aa		11.98	□□□□□ -0.49
SRSF5-208	ENST00000554929	ADAMTS4	O75173	837 aa		11.98	□□□□□ -0.49
SRSF5-208	ENST00000554929	GADD45B	O75293	160 aa	Predicted RBP	11.98	□□□□□ -0.49
SRSF5-208	ENST00000554929	TAL1	P17542	331 aa	Predicted RBP	11.98	□□□□□ -0.49
SRSF5-208	ENST00000554929	CDK7	P50613	346 aa		11.98	□□□□□ -0.49
SRSF5-208	ENST00000554929	PLCB2	Q00722	1185 aa		11.98	□□□□□ -0.49
SRSF5-208	ENST00000554929	MECOM	Q03112	1051 aa		11.98	□□□□□ -0.49
SRSF5-208	ENST00000554929	SPTY2D1	Q68D10	685 aa	Predicted RBP	11.98	□□□□□ -0.49
SRSF5-208	ENST00000554929	ATL3	Q6DD88	541 aa		11.98	□□□□□ -0.49
SRSF5-208	ENST00000554929	LBX2	Q6XYB7	198 aa		11.98	□□□□□ -0.49
SRSF5-208	ENST00000554929	ZSCAN30	Q86W11	494 aa		11.98	□□□□□ -0.49
SRSF5-208	ENST00000554929	TEX11	Q8IYF3	940 aa		11.98	□□□□□ -0.49
SRSF5-208	ENST00000554929	ZNF274	Q96GC6	653 aa	Predicted RBP	11.98	□□□□□ -0.49
SRSF5-208	ENST00000554929	MFSD14A	Q96MC6	490 aa		11.98	□□□□□ -0.49
SRSF5-208	ENST00000554929	SEC62	Q99442	399 aa	Known RBP	11.98	□□□□□ -0.49
SRSF5-208	ENST00000554929	FIBP	O43427	364 aa		11.97	□□□□□ -0.49
SRSF5-208	ENST00000554929	UQCRFS1P1	P0C7P4	283 aa		11.97	□□□□□ -0.49
SRSF5-208	ENST00000554929	HSPD1	P10809	573 aa	Known RBP	11.97	□□□□□ -0.49
SRSF5-208	ENST00000554929	AKR1A1	P14550	325 aa		11.97	□□□□□ -0.49
SRSF5-208	ENST00000554929	IL9	P15248	144 aa		11.97	□□□□□ -0.49
SRSF5-208	ENST00000554929	VCAM1	P19320	739 aa		11.97	□□□□□ -0.49
SRSF5-208	ENST00000554929	MSN	P26038	577 aa	Known RBP	11.97	□□□□□ -0.49
SRSF5-208	ENST00000554929	CCL23	P55773	120 aa		11.97	□□□□□ -0.49
SRSF5-208	ENST00000554929	EXOSC10	Q01780	885 aa	Known RBP	11.97	□□□□□ -0.49
SRSF5-208	ENST00000554929	DNM1	Q05193	864 aa	Known RBP	11.97	□□□□□ -0.49
SRSF5-208	ENST00000554929	GRB10	Q13322	594 aa		11.97	□□□□□ -0.49
SRSF5-208	ENST00000554929	ATP2B3	Q16720	1220 aa		11.97	□□□□□ -0.49
SRSF5-208	ENST00000554929	IMMT	Q16891	758 aa	Known RBP	11.97	□□□□□ -0.49
SRSF5-208	ENST00000554929	NCAPG2	Q86XI2	1143 aa		11.97	□□□□□ -0.49
SRSF5-208	ENST00000554929	RGS22	Q8NE09	1264 aa		11.97	□□□□□ -0.49
SRSF5-208	ENST00000554929	PRSS33	Q8NF86	280 aa		11.97	□□□□□ -0.49
SRSF5-208	ENST00000554929	SMARCC2	Q8TAQ2	1214 aa		11.97	□□□□□ -0.49
SRSF5-208	ENST00000554929	APPBP2	Q92624	585 aa		11.97	□□□□□ -0.49
SRSF5-208	ENST00000554929	CHAMP1	Q96JM3	812 aa		11.97	□□□□□ -0.49
SRSF5-208	ENST00000554929	C12orf42	Q96LP6	360 aa		11.97	□□□□□ -0.49
SRSF5-208	ENST00000554929	DNAJC18	Q9H819	358 aa		11.97	□□□□□ -0.49
SRSF5-208	ENST00000554929	GDPD2	Q9HCC8	539 aa		11.97	□□□□□ -0.49
SRSF5-208	ENST00000554929	GINM1	Q9NU53	330 aa		11.97	□□□□□ -0.49
SRSF5-208	ENST00000554929	CCDC39	Q9UFE4	941 aa		11.97	□□□□□ -0.49
SRSF5-208	ENST00000554929	ZNF236	Q9UL36	1845 aa		11.97	□□□□□ -0.49
SRSF5-208	ENST00000554929	UMODL1	Q5DID0	1318 aa		11.96	□□□□□ -0.49
SRSF5-208	ENST00000554929	WDR19	Q8NEZ3	1342 aa		11.96	□□□□□ -0.49
SRSF5-208	ENST00000554929	SYNRG	Q9UMZ2	1314 aa		11.96	□□□□□ -0.49
SRSF5-208	ENST00000554929	GOLGA6L4	A6NEF3	574 aa		11.96	□□□□□ -0.49
SRSF5-208	ENST00000554929		E7EWF7	191 aa		11.96	□□□□□ -0.49
SRSF5-208	ENST00000554929		H3BQV1	296 aa		11.96	□□□□□ -0.49
SRSF5-208	ENST00000554929	ARVCF	O00192	962 aa		11.96	□□□□□ -0.49
SRSF5-208	ENST00000554929	GH2	P01242	217 aa		11.96	□□□□□ -0.49
SRSF5-208	ENST00000554929	PLS1	Q14651	629 aa		11.96	□□□□□ -0.49
SRSF5-208	ENST00000554929	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.96	□□□□□ -0.49
SRSF5-208	ENST00000554929	NAA16	Q6N069	864 aa	Predicted RBP	11.96	□□□□□ -0.49
SRSF5-208	ENST00000554929	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.96	□□□□□ -0.49
SRSF5-208	ENST00000554929	FAM126B	Q8IXS8	530 aa		11.96	□□□□□ -0.49
SRSF5-208	ENST00000554929	KLHDC9	Q8NEP7	349 aa		11.96	□□□□□ -0.49
SRSF5-208	ENST00000554929	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	11.96	□□□□□ -0.49
SRSF5-208	ENST00000554929	SPATC1L	Q9H0A9	340 aa		11.96	□□□□□ -0.49
SRSF5-208	ENST00000554929	DHX36	Q9H2U1	1008 aa	Known RBP	11.96	□□□□□ -0.49
SRSF5-208	ENST00000554929	HIPK3	Q9H422	1215 aa		11.96	□□□□□ -0.49
SRSF5-208	ENST00000554929	RPAP3	Q9H6T3	665 aa	Predicted RBP	11.96	□□□□□ -0.49
SRSF5-208	ENST00000554929	UBE2Z	Q9H832	354 aa	Predicted RBP	11.96	□□□□□ -0.49
SRSF5-208	ENST00000554929	NRBP1	Q9UHY1	535 aa		11.96	□□□□□ -0.49
SRSF5-208	ENST00000554929	CFAP45	Q9UL16	551 aa		11.96	□□□□□ -0.49
SRSF5-208	ENST00000554929	ZNFX1	Q9P2E3	1918 aa	Known RBP	11.96	□□□□□ -0.5
SRSF5-208	ENST00000554929		A0A0U1RQG5	324 aa	Predicted RBP	11.95	□□□□□ -0.5
SRSF5-208	ENST00000554929	MYADML2	A6NDP7	307 aa		11.95	□□□□□ -0.5
SRSF5-208	ENST00000554929	DHX16	O60231	1041 aa	Known RBP	11.95	□□□□□ -0.5
SRSF5-208	ENST00000554929	LDHC	P07864	332 aa		11.95	□□□□□ -0.5
SRSF5-208	ENST00000554929	KCNA5	P22460	613 aa		11.95	□□□□□ -0.5
SRSF5-208	ENST00000554929	USP14	P54578	494 aa		11.95	□□□□□ -0.5
SRSF5-208	ENST00000554929	RASGRF1	Q13972	1273 aa		11.95	□□□□□ -0.5
SRSF5-208	ENST00000554929	CCDC102B	Q68D86	513 aa		11.95	□□□□□ -0.5
SRSF5-208	ENST00000554929	PTCRA	Q6ISU1	281 aa	Predicted RBP	11.95	□□□□□ -0.5
SRSF5-208	ENST00000554929	PADI6	Q6TGC4	694 aa		11.95	□□□□□ -0.5
SRSF5-208	ENST00000554929	NUDT18	Q6ZVK8	323 aa		11.95	□□□□□ -0.5
SRSF5-208	ENST00000554929	FOXP4	Q8IVH2	680 aa	Predicted RBP	11.95	□□□□□ -0.5
SRSF5-208	ENST00000554929	RPUSD2	Q8IZ73	545 aa	Known RBP	11.95	□□□□□ -0.5
SRSF5-208	ENST00000554929	SHCBP1	Q8NEM2	672 aa		11.95	□□□□□ -0.5
SRSF5-208	ENST00000554929	ZNF384	Q8TF68	577 aa		11.95	□□□□□ -0.5
SRSF5-208	ENST00000554929	ZNF318	Q5VUA4	2279 aa		11.95	□□□□□ -0.5
SRSF5-208	ENST00000554929	SIPA1L1	O43166	1804 aa		11.95	□□□□□ -0.5
SRSF5-208	ENST00000554929	ZDBF2	Q9HCK1	2354 aa		11.94	□□□□□ -0.5
SRSF5-208	ENST00000554929	ASGR1	P07306	291 aa		11.94	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms