RNA–Protein interactions for RNA: ENST00000554683.1

CNIH1-204, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 3

Gene CNIH1, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-204ENST00000554683 TYW1BQ6NUM6 668 aa12.36□□□□□ -0.43
CNIH1-204ENST00000554683 PPP1R18Q6NYC8 613 aa12.36□□□□□ -0.43
CNIH1-204ENST00000554683 ARMCX2Q7L311 632 aa12.36□□□□□ -0.43
CNIH1-204ENST00000554683 HEATR3Q7Z4Q2 680 aa12.36□□□□□ -0.43
CNIH1-204ENST00000554683 MCF2L2Q86YR7 1114 aa12.36□□□□□ -0.43
CNIH1-204ENST00000554683 SYTL5Q8TDW5 730 aaPredicted RBP12.36□□□□□ -0.43
CNIH1-204ENST00000554683 MORC4Q8TE76 937 aa12.36□□□□□ -0.43
CNIH1-204ENST00000554683 TBC1D5Q92609 795 aa12.36□□□□□ -0.43
CNIH1-204ENST00000554683 GPKOWQ92917 476 aaPredicted RBP eCLIP12.36□□□□□ -0.43
CNIH1-204ENST00000554683 SHISA4Q96DD7 197 aa12.36□□□□□ -0.43
CNIH1-204ENST00000554683 KATNBL1Q9H079 304 aa12.36□□□□□ -0.43
CNIH1-204ENST00000554683 NRBP1Q9UHY1 535 aa12.36□□□□□ -0.43
CNIH1-204ENST00000554683 FRMPD4Q14CM0 1322 aa12.36□□□□□ -0.43
CNIH1-204ENST00000554683 LOC102724159A0A0B4J2E5 919 aa12.35□□□□□ -0.43
CNIH1-204ENST00000554683 hCG_1984214I3L0E3 225 aa12.35□□□□□ -0.43
CNIH1-204ENST00000554683 STXBP3O00186 592 aa12.35□□□□□ -0.43
CNIH1-204ENST00000554683 SNAI1O95863 264 aaPredicted RBP12.35□□□□□ -0.43
CNIH1-204ENST00000554683 EDNRBP24530 442 aa12.35□□□□□ -0.43
CNIH1-204ENST00000554683 SOX10P56693 466 aa12.35□□□□□ -0.43
CNIH1-204ENST00000554683 ST3GAL1Q11201 340 aa12.35□□□□□ -0.43
CNIH1-204ENST00000554683 PWP2Q15269 919 aaKnown RBP12.35□□□□□ -0.43
CNIH1-204ENST00000554683 PKN1Q16512 942 aa12.35□□□□□ -0.43
CNIH1-204ENST00000554683 ME3Q16798 604 aa12.35□□□□□ -0.43
CNIH1-204ENST00000554683 PFKFB3Q16875 520 aaPredicted RBP12.35□□□□□ -0.43
CNIH1-204ENST00000554683 NOL8Q76FK4 1167 aaKnown RBP12.35□□□□□ -0.43
CNIH1-204ENST00000554683 SAMD3Q8N6K7 520 aa12.35□□□□□ -0.43
CNIH1-204ENST00000554683 ZNF713Q8N859 430 aaPredicted RBP12.35□□□□□ -0.43
CNIH1-204ENST00000554683 DNERQ8NFT8 737 aa12.35□□□□□ -0.43
CNIH1-204ENST00000554683 PHKBQ93100 1093 aa12.35□□□□□ -0.43
CNIH1-204ENST00000554683 GTF3C6Q969F1 213 aa12.35□□□□□ -0.43
CNIH1-204ENST00000554683 RNF26Q9BY78 433 aaPredicted RBP12.35□□□□□ -0.43
CNIH1-204ENST00000554683 RNF208Q9H0X6 261 aa12.35□□□□□ -0.43
CNIH1-204ENST00000554683 SLKQ9H2G2 1235 aaPredicted RBP12.35□□□□□ -0.43
CNIH1-204ENST00000554683 HMX1Q9NP08 348 aaPredicted RBP12.35□□□□□ -0.43
CNIH1-204ENST00000554683 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.35□□□□□ -0.43
CNIH1-204ENST00000554683 RBM27Q9P2N5 1060 aaKnown RBP12.35□□□□□ -0.43
CNIH1-204ENST00000554683 DDX49Q9Y6V7 483 aaKnown RBP12.35□□□□□ -0.43
CNIH1-204ENST00000554683 DNAH12Q6ZR08 3092 aa12.35□□□□□ -0.43
CNIH1-204ENST00000554683 MYH7BA7E2Y1 1941 aa12.35□□□□□ -0.43
CNIH1-204ENST00000554683 ASB14A6NK59 587 aa12.34□□□□□ -0.43
CNIH1-204ENST00000554683 PRPF3O43395 683 aaKnown RBP12.34□□□□□ -0.43
CNIH1-204ENST00000554683 CFBP00751 764 aa12.34□□□□□ -0.43
CNIH1-204ENST00000554683 GJB1P08034 283 aa12.34□□□□□ -0.43
CNIH1-204ENST00000554683 ZNF865P0CJ78 1059 aaPredicted RBP12.34□□□□□ -0.43
CNIH1-204ENST00000554683 SCG2P13521 617 aa12.34□□□□□ -0.43
CNIH1-204ENST00000554683 HOXA13P31271 388 aaPredicted RBP12.34□□□□□ -0.43
CNIH1-204ENST00000554683 GJA8P48165 433 aa12.34□□□□□ -0.43
CNIH1-204ENST00000554683 SLC26A6Q9BXS9 759 aa12.34□□□□□ -0.43
CNIH1-204ENST00000554683 BARHL2Q9NY43 387 aa12.34□□□□□ -0.43
CNIH1-204ENST00000554683 MAP3K20Q9NYL2 800 aaKnown RBP12.34□□□□□ -0.43
CNIH1-204ENST00000554683 ADD3Q9UEY8 706 aaKnown RBP12.34□□□□□ -0.43
CNIH1-204ENST00000554683 METRNQ9UJH8 293 aa12.34□□□□□ -0.43
CNIH1-204ENST00000554683 V9GY48 417 aaPredicted RBP12.34□□□□□ -0.43
CNIH1-204ENST00000554683 ALPK3Q96L96 1907 aa12.34□□□□□ -0.43
CNIH1-204ENST00000554683 STK36Q9NRP7 1315 aa12.34□□□□□ -0.43
CNIH1-204ENST00000554683 TNRC18O15417 2968 aaPredicted RBP12.33□□□□□ -0.43
CNIH1-204ENST00000554683 GCOM1H8Y6P7 765 aaPredicted RBP12.33□□□□□ -0.44
CNIH1-204ENST00000554683 PIK3CDO00329 1044 aa12.33□□□□□ -0.44
CNIH1-204ENST00000554683 CPLX1O14810 134 aa12.33□□□□□ -0.44
CNIH1-204ENST00000554683 SEPT4O43236 478 aa12.33□□□□□ -0.44
CNIH1-204ENST00000554683 PPFIA3O75145 1194 aa12.33□□□□□ -0.44
CNIH1-204ENST00000554683 CTDNEP1O95476 244 aa12.33□□□□□ -0.44
CNIH1-204ENST00000554683 POLR2MP0CAP2 368 aa12.33□□□□□ -0.44
CNIH1-204ENST00000554683 PRAMEF19Q5SWL8 479 aa12.33□□□□□ -0.44
CNIH1-204ENST00000554683 U2AF1L4Q8WU68 220 aaKnown RBP12.33□□□□□ -0.44
CNIH1-204ENST00000554683 DEFB118Q96PH6 123 aa12.33□□□□□ -0.44
CNIH1-204ENST00000554683 TAAR1Q96RJ0 339 aa12.33□□□□□ -0.44
CNIH1-204ENST00000554683 CRISPLD2Q9H0B8 497 aa12.33□□□□□ -0.44
CNIH1-204ENST00000554683 PXMP2Q9NR77 195 aa12.33□□□□□ -0.44
CNIH1-204ENST00000554683 DDX20Q9UHI6 824 aaKnown RBP12.33□□□□□ -0.44
CNIH1-204ENST00000554683 CNPY2Q9Y2B0 182 aa12.33□□□□□ -0.44
CNIH1-204ENST00000554683 DOCK5Q9H7D0 1870 aa12.32□□□□□ -0.44
CNIH1-204ENST00000554683 ESYT2A0FGR8 921 aa12.32□□□□□ -0.44
CNIH1-204ENST00000554683 MEIS2O14770 477 aa12.32□□□□□ -0.44
CNIH1-204ENST00000554683 ADCY6O43306 1168 aa12.32□□□□□ -0.44
CNIH1-204ENST00000554683 CD2BP2O95400 341 aaKnown RBP12.32□□□□□ -0.44
CNIH1-204ENST00000554683 NAPAP54920 295 aa12.32□□□□□ -0.44
CNIH1-204ENST00000554683 ACVR2BQ13705 512 aa12.32□□□□□ -0.44
CNIH1-204ENST00000554683 LHX8Q68G74 356 aa12.32□□□□□ -0.44
CNIH1-204ENST00000554683 FBXO16Q8IX29 292 aaPredicted RBP12.32□□□□□ -0.44
CNIH1-204ENST00000554683 TRIM22Q8IYM9 498 aa12.32□□□□□ -0.44
CNIH1-204ENST00000554683 NECAB1Q8N987 351 aa12.32□□□□□ -0.44
CNIH1-204ENST00000554683 LENG1Q96BZ8 264 aaPredicted RBP12.32□□□□□ -0.44
CNIH1-204ENST00000554683 RMDN3Q96TC7 470 aa12.32□□□□□ -0.44
CNIH1-204ENST00000554683 ABHD16BQ9H3Z7 469 aa12.32□□□□□ -0.44
CNIH1-204ENST00000554683 ZHX1Q9UKY1 873 aaPredicted RBP12.32□□□□□ -0.44
CNIH1-204ENST00000554683 LIMCH1Q9UPQ0 1083 aa12.32□□□□□ -0.44
CNIH1-204ENST00000554683 MSCO60682 206 aa12.31□□□□□ -0.44
CNIH1-204ENST00000554683 CDKL5O76039 1030 aa12.31□□□□□ -0.44
CNIH1-204ENST00000554683 SGPL1O95470 568 aa12.31□□□□□ -0.44
CNIH1-204ENST00000554683 AKR1A1P14550 325 aa12.31□□□□□ -0.44
CNIH1-204ENST00000554683 EIF2AK2P19525 551 aaKnown RBP12.31□□□□□ -0.44
CNIH1-204ENST00000554683 EN2P19622 333 aaPredicted RBP12.31□□□□□ -0.44
CNIH1-204ENST00000554683 UBE2SQ16763 222 aa12.31□□□□□ -0.44
CNIH1-204ENST00000554683 CPLX2Q6PUV4 134 aaKnown RBP12.31□□□□□ -0.44
CNIH1-204ENST00000554683 USP17L6PQ6QN14 398 aa12.31□□□□□ -0.44
CNIH1-204ENST00000554683 TEX2Q8IWB9 1127 aa12.31□□□□□ -0.44
CNIH1-204ENST00000554683 NSUN7Q8NE18 718 aaKnown RBP12.31□□□□□ -0.44
CNIH1-204ENST00000554683 IL27Q8NEV9 243 aa12.31□□□□□ -0.44
CNIH1-204ENST00000554683 IL31RAQ8NI17 732 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms