RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 LACTBP83111 547 aaPredicted RBP3.13□□□□□ -1.91
PRPF39-206ENST00000554429 MDM2Q00987 491 aaPredicted RBP3.13□□□□□ -1.91
PRPF39-206ENST00000554429 TRIM29Q14134 588 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 TMEM95Q3KNT9 176 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 BRDTQ58F21 947 aaPredicted RBP3.13□□□□□ -1.91
PRPF39-206ENST00000554429 GJC2Q5T442 439 aaPredicted RBP3.13□□□□□ -1.91
PRPF39-206ENST00000554429 SAMD14Q8IZD0 417 aaPredicted RBP3.13□□□□□ -1.91
PRPF39-206ENST00000554429 SAMD3Q8N6K7 520 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 ARL10Q8N8L6 244 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 EXOC6Q8TAG9 804 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 ZFPM2Q8WW38 1151 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 SH3KBP1Q96B97 665 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 OPTNQ96CV9 577 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 MRFAP1L1Q96HT8 127 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 PRMT6Q96LA8 375 aaPredicted RBP3.13□□□□□ -1.91
PRPF39-206ENST00000554429 ZNF396Q96N95 335 aaPredicted RBP3.13□□□□□ -1.91
PRPF39-206ENST00000554429 STK31Q9BXU1 1019 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 DHX36Q9H2U1 1008 aaKnown RBP3.13□□□□□ -1.91
PRPF39-206ENST00000554429 TMX1Q9H3N1 280 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 EMILIN3Q9NT22 766 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 FANCLQ9NW38 375 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 C9orf78Q9NZ63 289 aaPredicted RBP3.13□□□□□ -1.91
PRPF39-206ENST00000554429 LUZP4Q9P127 313 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 ACAD8Q9UKU7 415 aa3.13□□□□□ -1.91
PRPF39-206ENST00000554429 CCDC163A0A0D9SF12 145 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 C19orf81C9J6K1 198 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 H3BRB1 525 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 CXCL11O14625 94 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 ZBTB7BO15156 539 aaPredicted RBP3.12□□□□□ -1.91
PRPF39-206ENST00000554429 NBNO60934 754 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 CAND2O75155 1236 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 IPO7O95373 1038 aaKnown RBP3.12□□□□□ -1.91
PRPF39-206ENST00000554429 RPN1P04843 607 aaKnown RBP3.12□□□□□ -1.91
PRPF39-206ENST00000554429 GJB1P08034 283 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 BCRP11274 1271 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 XRCC5P13010 732 aaKnown RBP3.12□□□□□ -1.91
PRPF39-206ENST00000554429 TNFAIP3P21580 790 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 SNX16P57768 344 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 NUCB1Q02818 461 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 IFIT5Q13325 482 aaKnown RBP3.12□□□□□ -1.91
PRPF39-206ENST00000554429 PPP2R5CQ13362 524 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 SNAPC2Q13487 334 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 RASA3Q14644 834 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 SLMAPQ14BN4 828 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 NBPF12Q5TAG4 269 aaPredicted RBP3.12□□□□□ -1.91
PRPF39-206ENST00000554429 UTP14CQ5TAP6 766 aaKnown RBP3.12□□□□□ -1.91
PRPF39-206ENST00000554429 ANKRD45Q5TZF3 282 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 LLGL2Q6P1M3 1020 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 RASGRP2Q7LDG7 609 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 DZIP1LQ8IYY4 767 aaKnown RBP3.12□□□□□ -1.91
PRPF39-206ENST00000554429 FAM43AQ8N2R8 423 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 TSPYL6Q8N831 410 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 CLMNQ96JQ2 1002 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 FAM84BQ96KN1 310 aaPredicted RBP3.12□□□□□ -1.91
PRPF39-206ENST00000554429 CNTNAP3BQ96NU0 1288 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 MPHOSPH8Q99549 860 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 EIF2AK1Q9BQI3 630 aaKnown RBP3.12□□□□□ -1.91
PRPF39-206ENST00000554429 MXD3Q9BW11 206 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 CNTNAP3Q9BZ76 1288 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 TRIM6Q9C030 488 aaPredicted RBP3.12□□□□□ -1.91
PRPF39-206ENST00000554429 TUT1Q9H6E5 874 aaKnown RBP3.12□□□□□ -1.91
PRPF39-206ENST00000554429 C12orf49Q9H741 205 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 GINM1Q9NU53 330 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 SRRDQ9UH36 339 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 FCF1Q9Y324 198 aaKnown RBP3.12□□□□□ -1.91
PRPF39-206ENST00000554429 MAGED1Q9Y5V3 778 aaPredicted RBP3.12□□□□□ -1.91
PRPF39-206ENST00000554429 ZNF521Q96K83 1311 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 FAM221BA6H8Z2 402 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 WTIPA6NIX2 430 aaPredicted RBP3.12□□□□□ -1.91
PRPF39-206ENST00000554429 SMTNL1A8MU46 457 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 KIF1CO43896 1103 aaKnown RBP3.12□□□□□ -1.91
PRPF39-206ENST00000554429 AGR2O95994 175 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 MYL1P05976 194 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 TPM3P06753 285 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 EN2P19622 333 aaPredicted RBP3.12□□□□□ -1.91
PRPF39-206ENST00000554429 HOXD10P28358 340 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 TRPC1P48995 793 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 PPM1FP49593 454 aaPredicted RBP3.12□□□□□ -1.91
PRPF39-206ENST00000554429 CLK2P49760 499 aaKnown RBP3.12□□□□□ -1.91
PRPF39-206ENST00000554429 SLC20A2Q08357 652 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 MTMR3Q13615 1198 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 VGLL4Q14135 290 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 TWISTNBQ3B726 338 aaPredicted RBP3.12□□□□□ -1.91
PRPF39-206ENST00000554429 ACBD5Q5T8D3 534 aaPredicted RBP3.12□□□□□ -1.91
PRPF39-206ENST00000554429 AGAP9Q5VTM2 703 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 DCAF15Q66K64 600 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 IL31Q6EBC2 164 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 FAM109BQ6ICB4 259 aaPredicted RBP3.12□□□□□ -1.91
PRPF39-206ENST00000554429 CCDC73Q6ZRK6 1079 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 UBE3BQ7Z3V4 1068 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 ANKRD42Q8N9B4 389 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 TRIML1Q8N9V2 468 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 PRR7Q8TB68 274 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 FAM151AQ8WW52 585 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 FEZ1Q99689 392 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 ZNF341Q9BYN7 854 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 TGIF2Q9GZN2 237 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 RIC8AQ9NPQ8 531 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 LIMD1Q9UGP4 676 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 ZNF232Q9UNY5 417 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms