RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 GPR108Q9NPR9 543 aa20.17■□□□□ 0.82
NEK9-204ENST00000554258 PCDHB15Q9Y5E8 787 aa20.17■□□□□ 0.82
NEK9-204ENST00000554258 PNMA6EA0A0J9YXQ4 647 aa20.16■□□□□ 0.82
NEK9-204ENST00000554258 H3BNC9 293 aa20.16■□□□□ 0.82
NEK9-204ENST00000554258 EFCAB14O75071 495 aa20.16■□□□□ 0.82
NEK9-204ENST00000554258 RGS20O76081 388 aa20.16■□□□□ 0.82
NEK9-204ENST00000554258 SIGLEC14Q08ET2 396 aa20.16■□□□□ 0.82
NEK9-204ENST00000554258 CAGE1Q8TC20 777 aa20.16■□□□□ 0.82
NEK9-204ENST00000554258 SDR42E1Q8WUS8 393 aa20.16■□□□□ 0.82
NEK9-204ENST00000554258 SLC38A10Q9HBR0 1119 aa20.16■□□□□ 0.82
NEK9-204ENST00000554258 DCP1AQ9NPI6 582 aaPredicted RBP20.16■□□□□ 0.82
NEK9-204ENST00000554258 PTPN11Q06124 597 aaPredicted RBP20.15■□□□□ 0.82
NEK9-204ENST00000554258 DLX2Q07687 328 aaPredicted RBP20.15■□□□□ 0.82
NEK9-204ENST00000554258 IKBKEQ14164 716 aa20.15■□□□□ 0.82
NEK9-204ENST00000554258 GPNMBQ14956 572 aa20.15■□□□□ 0.82
NEK9-204ENST00000554258 LRRC8DQ7L1W4 858 aa20.15■□□□□ 0.82
NEK9-204ENST00000554258 ACAD9Q9H845 621 aa20.15■□□□□ 0.82
NEK9-204ENST00000554258 A1CFQ9NQ94 594 aaKnown RBP20.15■□□□□ 0.82
NEK9-204ENST00000554258 SELPP16109 830 aa20.14■□□□□ 0.81
NEK9-204ENST00000554258 NBL1P41271 181 aa20.14■□□□□ 0.81
NEK9-204ENST00000554258 CDK8P49336 464 aa20.14■□□□□ 0.81
NEK9-204ENST00000554258 NUBP1P53384 320 aa20.14■□□□□ 0.81
NEK9-204ENST00000554258 TCTN1Q2MV58 587 aa20.14■□□□□ 0.81
NEK9-204ENST00000554258 CTC1Q2NKJ3 1217 aa20.14■□□□□ 0.81
NEK9-204ENST00000554258 DUSP28Q4G0W2 176 aa20.14■□□□□ 0.81
NEK9-204ENST00000554258 VTA1Q9NP79 307 aa20.14■□□□□ 0.81
NEK9-204ENST00000554258 CHD6Q8TD26 2715 aa20.14■□□□□ 0.81
NEK9-204ENST00000554258 CFAP47Q6ZTR5 3102 aa20.13■□□□□ 0.81
NEK9-204ENST00000554258 PARNO95453 639 aaKnown RBP20.13■□□□□ 0.81
NEK9-204ENST00000554258 CXCL10P02778 98 aa20.13■□□□□ 0.81
NEK9-204ENST00000554258 OAZ1P54368 228 aa20.13■□□□□ 0.81
NEK9-204ENST00000554258 PTGISQ16647 500 aa20.13■□□□□ 0.81
NEK9-204ENST00000554258 BRDTQ58F21 947 aaPredicted RBP20.13■□□□□ 0.81
NEK9-204ENST00000554258 ADSSL1Q8N142 457 aa20.13■□□□□ 0.81
NEK9-204ENST00000554258 ANTXR1Q9H6X2 564 aa20.13■□□□□ 0.81
NEK9-204ENST00000554258 ZFHX4Q86UP3 3567 aa20.12■□□□□ 0.81
NEK9-204ENST00000554258 GALR2O43603 387 aaPredicted RBP20.12■□□□□ 0.81
NEK9-204ENST00000554258 NBNO60934 754 aa20.12■□□□□ 0.81
NEK9-204ENST00000554258 CHMP4BP1P59074 171 aa20.12■□□□□ 0.81
NEK9-204ENST00000554258 ERICH6BQ5W0A0 696 aa20.12■□□□□ 0.81
NEK9-204ENST00000554258 OR6J1Q8NGC5 347 aa20.12■□□□□ 0.81
NEK9-204ENST00000554258 NKD2Q969F2 451 aaPredicted RBP20.12■□□□□ 0.81
NEK9-204ENST00000554258 ASIC4Q96FT7 647 aa20.12■□□□□ 0.81
NEK9-204ENST00000554258 CD207Q9UJ71 328 aa20.12■□□□□ 0.81
NEK9-204ENST00000554258 MYH4Q9Y623 1939 aa20.12■□□□□ 0.81
NEK9-204ENST00000554258 RALGAPA2Q2PPJ7 1873 aa20.11■□□□□ 0.81
NEK9-204ENST00000554258 F5H6K3 240 aa20.11■□□□□ 0.81
NEK9-204ENST00000554258 NDUFB10O96000 172 aa20.11■□□□□ 0.81
NEK9-204ENST00000554258 NEFLP07196 543 aa20.11■□□□□ 0.81
NEK9-204ENST00000554258 KLRC3Q07444 240 aa20.11■□□□□ 0.81
NEK9-204ENST00000554258 MKRN4PQ13434 485 aaPredicted RBP20.11■□□□□ 0.81
NEK9-204ENST00000554258 OS9Q13438 667 aaPredicted RBP20.11■□□□□ 0.81
NEK9-204ENST00000554258 DGLUCYQ7Z3D6 616 aa20.11■□□□□ 0.81
NEK9-204ENST00000554258 SP7Q8TDD2 431 aaPredicted RBP20.11■□□□□ 0.81
NEK9-204ENST00000554258 WDR11Q9BZH6 1224 aa20.11■□□□□ 0.81
NEK9-204ENST00000554258 RNF146Q9NTX7 359 aa20.11■□□□□ 0.81
NEK9-204ENST00000554258 DBNLQ9UJU6 430 aaKnown RBP20.11■□□□□ 0.81
NEK9-204ENST00000554258 NOP58Q9Y2X3 529 aaKnown RBP20.11■□□□□ 0.81
NEK9-204ENST00000554258 ATRXP46100 2492 aa20.1■□□□□ 0.81
NEK9-204ENST00000554258 HMMRO75330 724 aa20.1■□□□□ 0.81
NEK9-204ENST00000554258 TBX10O75333 385 aa20.1■□□□□ 0.81
NEK9-204ENST00000554258 HTRA4P83105 476 aaPredicted RBP20.1■□□□□ 0.81
NEK9-204ENST00000554258 TMEM192Q8IY95 271 aa20.1■□□□□ 0.81
NEK9-204ENST00000554258 TLR7Q9NYK1 1049 aaKnown RBP20.1■□□□□ 0.81
NEK9-204ENST00000554258 CEP250Q9BV73 2442 aa20.1■□□□□ 0.81
NEK9-204ENST00000554258 RAD50Q92878 1312 aa20.09■□□□□ 0.81
NEK9-204ENST00000554258 LOC730098B7Z3J9 87 aa20.09■□□□□ 0.81
NEK9-204ENST00000554258 KPNA6O60684 536 aa20.09■□□□□ 0.81
NEK9-204ENST00000554258 AMHP03971 560 aa20.09■□□□□ 0.81
NEK9-204ENST00000554258 HYAL1Q12794 435 aa20.09■□□□□ 0.81
NEK9-204ENST00000554258 HDAC1Q13547 482 aaPredicted RBP20.09■□□□□ 0.81
NEK9-204ENST00000554258 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.09■□□□□ 0.81
NEK9-204ENST00000554258 C16orf86Q6ZW13 317 aa20.09■□□□□ 0.81
NEK9-204ENST00000554258 FBXO11Q86XK2 927 aa20.09■□□□□ 0.81
NEK9-204ENST00000554258 AMOTL1Q8IY63 956 aa20.09■□□□□ 0.81
NEK9-204ENST00000554258 MYOCDQ8IZQ8 938 aa20.09■□□□□ 0.81
NEK9-204ENST00000554258 LCORLQ8N3X6 602 aa20.09■□□□□ 0.81
NEK9-204ENST00000554258 CNTNAP3BQ96NU0 1288 aa20.09■□□□□ 0.81
NEK9-204ENST00000554258 CNTNAP3Q9BZ76 1288 aa20.09■□□□□ 0.81
NEK9-204ENST00000554258 FEM1BQ9UK73 627 aa20.09■□□□□ 0.81
NEK9-204ENST00000554258 LCTP09848 1927 aa20.09■□□□□ 0.81
NEK9-204ENST00000554258 GREB1LQ9C091 1923 aaPredicted RBP20.08■□□□□ 0.81
NEK9-204ENST00000554258 CYP2D7A0A087X1C5 515 aa20.08■□□□□ 0.81
NEK9-204ENST00000554258 FRMD5Q7Z6J6 570 aa20.08■□□□□ 0.81
NEK9-204ENST00000554258 YME1L1Q96TA2 773 aa20.08■□□□□ 0.81
NEK9-204ENST00000554258 SPTBN2O15020 2390 aa20.08■□□□□ 0.8
NEK9-204ENST00000554258 MAP1BP46821 2468 aaKnown RBP20.07■□□□□ 0.8
NEK9-204ENST00000554258 PKD1L2Q7Z442 2459 aa20.07■□□□□ 0.8
NEK9-204ENST00000554258 SLC9C2Q5TAH2 1124 aa20.07■□□□□ 0.8
NEK9-204ENST00000554258 C12orf60Q5U649 245 aa20.07■□□□□ 0.8
NEK9-204ENST00000554258 CTAGE1Q96RT6 745 aa20.07■□□□□ 0.8
NEK9-204ENST00000554258 CCDC8Q9H0W5 538 aaPredicted RBP20.07■□□□□ 0.8
NEK9-204ENST00000554258 IGFLR1Q9H665 355 aa20.07■□□□□ 0.8
NEK9-204ENST00000554258 CKBP12277 381 aa20.06■□□□□ 0.8
NEK9-204ENST00000554258 PDE6AP16499 860 aa20.06■□□□□ 0.8
NEK9-204ENST00000554258 CBX2Q14781 532 aaPredicted RBP20.06■□□□□ 0.8
NEK9-204ENST00000554258 MCTP2Q6DN12 878 aa20.06■□□□□ 0.8
NEK9-204ENST00000554258 GDF6Q6KF10 455 aaPredicted RBP20.06■□□□□ 0.8
NEK9-204ENST00000554258 DHX38Q92620 1227 aaKnown RBP20.06■□□□□ 0.8
NEK9-204ENST00000554258 RMDN1Q96DB5 314 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms