RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 KREMEN2Q8NCW0 462 aa7.4□□□□□ -1.22
ATXN3-225ENST00000554214 PANK1Q8TE04 598 aa7.4□□□□□ -1.22
ATXN3-225ENST00000554214 C8orf37Q96NL8 207 aa7.4□□□□□ -1.22
ATXN3-225ENST00000554214 BTG4Q9NY30 223 aa7.4□□□□□ -1.22
ATXN3-225ENST00000554214 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.4□□□□□ -1.22
ATXN3-225ENST00000554214 TMEFF2Q9UIK5 374 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-225ENST00000554214 PCDHA5Q9Y5H7 936 aa7.4□□□□□ -1.22
ATXN3-225ENST00000554214 A0A1W2PQU0 124 aa7.39□□□□□ -1.23
ATXN3-225ENST00000554214 GRIA2P42262 883 aa7.39□□□□□ -1.23
ATXN3-225ENST00000554214 PPP2R2AP63151 447 aa7.39□□□□□ -1.23
ATXN3-225ENST00000554214 ZNF200P98182 395 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-225ENST00000554214 PRSS53Q2L4Q9 553 aa7.39□□□□□ -1.23
ATXN3-225ENST00000554214 SIAH1Q8IUQ4 282 aa7.39□□□□□ -1.23
ATXN3-225ENST00000554214 IGDCC3Q8IVU1 814 aa7.39□□□□□ -1.23
ATXN3-225ENST00000554214 PLEKHO2Q8TD55 490 aa7.39□□□□□ -1.23
ATXN3-225ENST00000554214 DIO2Q92813 273 aa7.39□□□□□ -1.23
ATXN3-225ENST00000554214 KRTAP9-9Q9BYP9 154 aa7.39□□□□□ -1.23
ATXN3-225ENST00000554214 KRTAP9-4Q9BYQ2 154 aa7.39□□□□□ -1.23
ATXN3-225ENST00000554214 TTBK1Q5TCY1 1321 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-225ENST00000554214 IRS2Q9Y4H2 1338 aa7.38□□□□□ -1.23
ATXN3-225ENST00000554214 MEFVO15553 781 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-225ENST00000554214 BUB1BO60566 1050 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-225ENST00000554214 NTRK1P04629 796 aa7.38□□□□□ -1.23
ATXN3-225ENST00000554214 CAPNS1P04632 268 aa7.38□□□□□ -1.23
ATXN3-225ENST00000554214 PI3P19957 117 aa7.38□□□□□ -1.23
ATXN3-225ENST00000554214 GFRA1P56159 465 aa7.38□□□□□ -1.23
ATXN3-225ENST00000554214 E4F1Q66K89 784 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-225ENST00000554214 LCNL1Q6ZST4 164 aa7.38□□□□□ -1.23
ATXN3-225ENST00000554214 AMIGO3Q86WK7 504 aa7.38□□□□□ -1.23
ATXN3-225ENST00000554214 CCDC103Q8IW40 242 aa7.38□□□□□ -1.23
ATXN3-225ENST00000554214 PEX11GQ96HA9 241 aa7.38□□□□□ -1.23
ATXN3-225ENST00000554214 MARCH2Q9P0N8 246 aa7.38□□□□□ -1.23
ATXN3-225ENST00000554214 TIMM13Q9Y5L4 95 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-225ENST00000554214 RFXAPO00287 272 aa7.37□□□□□ -1.23
ATXN3-225ENST00000554214 IRS4O14654 1257 aaPredicted RBP7.37□□□□□ -1.23
ATXN3-225ENST00000554214 U2SURPO15042 1029 aaKnown RBP7.37□□□□□ -1.23
ATXN3-225ENST00000554214 PFKLP17858 780 aa7.37□□□□□ -1.23
ATXN3-225ENST00000554214 GTF2F1P35269 517 aaKnown RBP eCLIP7.37□□□□□ -1.23
ATXN3-225ENST00000554214 RBM10P98175 930 aaKnown RBP7.37□□□□□ -1.23
ATXN3-225ENST00000554214 HSP90AA2PQ14568 343 aaPredicted RBP7.37□□□□□ -1.23
ATXN3-225ENST00000554214 TARBP2Q15633 366 aaKnown RBP7.37□□□□□ -1.23
ATXN3-225ENST00000554214 TMEFF1Q8IYR6 380 aa7.37□□□□□ -1.23
ATXN3-225ENST00000554214 TMEM145Q8NBT3 493 aa7.37□□□□□ -1.23
ATXN3-225ENST00000554214 NETO2Q8NC67 525 aa7.37□□□□□ -1.23
ATXN3-225ENST00000554214 NUDT5Q9UKK9 219 aa7.37□□□□□ -1.23
ATXN3-225ENST00000554214 ARID1BQ8NFD5 2236 aaPredicted RBP7.36□□□□□ -1.23
ATXN3-225ENST00000554214 IQCA1LA6NCM1 817 aa7.36□□□□□ -1.23
ATXN3-225ENST00000554214 C22orf46C9J442 243 aa7.36□□□□□ -1.23
ATXN3-225ENST00000554214 RPL11P62913 178 aaKnown RBP7.36□□□□□ -1.23
ATXN3-225ENST00000554214 DENND5AQ6IQ26 1287 aa7.36□□□□□ -1.23
ATXN3-225ENST00000554214 CEP68Q76N32 757 aa7.36□□□□□ -1.23
ATXN3-225ENST00000554214 TEX2Q8IWB9 1127 aa7.36□□□□□ -1.23
ATXN3-225ENST00000554214 PPIL6Q8IXY8 311 aa7.36□□□□□ -1.23
ATXN3-225ENST00000554214 RCBTB1Q8NDN9 531 aa7.36□□□□□ -1.23
ATXN3-225ENST00000554214 ST13P5Q8NFI4 369 aaPredicted RBP7.36□□□□□ -1.23
ATXN3-225ENST00000554214 SGSM3Q96HU1 749 aa7.36□□□□□ -1.23
ATXN3-225ENST00000554214 BCAS3Q9H6U6 928 aa7.36□□□□□ -1.23
ATXN3-225ENST00000554214 EPB41L4AQ9HCS5 686 aaPredicted RBP7.36□□□□□ -1.23
ATXN3-225ENST00000554214 PLA2G2DQ9UNK4 145 aa7.36□□□□□ -1.23
ATXN3-225ENST00000554214 MYO1BO43795 1136 aa7.35□□□□□ -1.23
ATXN3-225ENST00000554214 LTBRP36941 435 aa7.35□□□□□ -1.23
ATXN3-225ENST00000554214 BCL6P41182 706 aa7.35□□□□□ -1.23
ATXN3-225ENST00000554214 KCNAB2Q13303 367 aa7.35□□□□□ -1.23
ATXN3-225ENST00000554214 ACBD5Q5T8D3 534 aaPredicted RBP7.35□□□□□ -1.23
ATXN3-225ENST00000554214 WWC2Q6AWC2 1192 aa7.35□□□□□ -1.23
ATXN3-225ENST00000554214 CNKSR3Q6P9H4 555 aa7.35□□□□□ -1.23
ATXN3-225ENST00000554214 SPOCD1Q6ZMY3 1216 aa7.35□□□□□ -1.23
ATXN3-225ENST00000554214 KCTD13Q8WZ19 329 aa7.35□□□□□ -1.23
ATXN3-225ENST00000554214 ALG3Q92685 438 aa7.35□□□□□ -1.23
ATXN3-225ENST00000554214 IER2Q9BTL4 223 aa7.35□□□□□ -1.23
ATXN3-225ENST00000554214 SIT1Q9Y3P8 196 aa7.35□□□□□ -1.23
ATXN3-225ENST00000554214 ZBTB7AO95365 584 aa7.34□□□□□ -1.23
ATXN3-225ENST00000554214 NCAM1P13591 858 aa7.34□□□□□ -1.23
ATXN3-225ENST00000554214 LCP1P13796 627 aa7.34□□□□□ -1.23
ATXN3-225ENST00000554214 GTF2A2P52657 109 aa7.34□□□□□ -1.23
ATXN3-225ENST00000554214 SLC9A5Q14940 896 aa7.34□□□□□ -1.23
ATXN3-225ENST00000554214 TESK1Q15569 626 aa7.34□□□□□ -1.23
ATXN3-225ENST00000554214 FBLN7Q53RD9 439 aa7.34□□□□□ -1.23
ATXN3-225ENST00000554214 SLC35F1Q5T1Q4 408 aa7.34□□□□□ -1.23
ATXN3-225ENST00000554214 TCERG1LQ5VWI1 586 aa7.34□□□□□ -1.23
ATXN3-225ENST00000554214 FAM129CQ86XR2 697 aa7.34□□□□□ -1.23
ATXN3-225ENST00000554214 TMEM151BQ8IW70 566 aa7.34□□□□□ -1.23
ATXN3-225ENST00000554214 DACT3Q96B18 629 aaPredicted RBP7.34□□□□□ -1.23
ATXN3-225ENST00000554214 TSPAN17Q96FV3 270 aa7.34□□□□□ -1.23
ATXN3-225ENST00000554214 TRMT2BQ96GJ1 504 aaKnown RBP7.34□□□□□ -1.23
ATXN3-225ENST00000554214 C1orf159Q96HA4 380 aa7.34□□□□□ -1.23
ATXN3-225ENST00000554214 CHAMP1Q96JM3 812 aa7.34□□□□□ -1.23
ATXN3-225ENST00000554214 PCDHA2Q9Y5H9 948 aa7.34□□□□□ -1.23
ATXN3-225ENST00000554214 PRODHO43272 600 aa7.33□□□□□ -1.24
ATXN3-225ENST00000554214 DLX3O60479 287 aa7.33□□□□□ -1.24
ATXN3-225ENST00000554214 ASGR2P07307 311 aa7.33□□□□□ -1.24
ATXN3-225ENST00000554214 ATF2P15336 505 aa7.33□□□□□ -1.24
ATXN3-225ENST00000554214 FBLN1P23142 703 aa7.33□□□□□ -1.24
ATXN3-225ENST00000554214 IGFBP6P24592 240 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-225ENST00000554214 RBL2Q08999 1139 aa7.33□□□□□ -1.24
ATXN3-225ENST00000554214 MAP4K2Q12851 820 aa7.33□□□□□ -1.24
ATXN3-225ENST00000554214 PWWP2AQ96N64 755 aa7.33□□□□□ -1.24
ATXN3-225ENST00000554214 AARSD1Q9BTE6 412 aaKnown RBP7.33□□□□□ -1.24
ATXN3-225ENST00000554214 HIRIP3Q9BW71 556 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-225ENST00000554214 CCDC85CA6NKD9 419 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms