RNA–Protein interactions for RNA: ENST00000553851.2

PRAF2-202, Transcript of PRA1 domain family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAF2, Length 1,334 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAF2-202ENST00000553851 TMEM87BQ96K49 555 aa23.46■■□□□ 1.35
PRAF2-202ENST00000553851 NFXL1Q6ZNB6 911 aa23.45■■□□□ 1.34
PRAF2-202ENST00000553851 OR6J1Q8NGC5 347 aa23.45■■□□□ 1.34
PRAF2-202ENST00000553851 IWS1Q96ST2 819 aa23.45■■□□□ 1.34
PRAF2-202ENST00000553851 MAP3K14Q99558 947 aa23.45■■□□□ 1.34
PRAF2-202ENST00000553851 MYL10Q9BUA6 226 aa23.45■■□□□ 1.34
PRAF2-202ENST00000553851 LTBP2Q14767 1821 aa23.44■■□□□ 1.34
PRAF2-202ENST00000553851 PNMA6FA0A0J9YX94 578 aa23.44■■□□□ 1.34
PRAF2-202ENST00000553851 SH2B2O14492 632 aaPredicted RBP23.44■■□□□ 1.34
PRAF2-202ENST00000553851 DDAH1O94760 285 aa23.44■■□□□ 1.34
PRAF2-202ENST00000553851 TRAF1Q13077 416 aa23.44■■□□□ 1.34
PRAF2-202ENST00000553851 PPP2R5BQ15173 497 aa23.44■■□□□ 1.34
PRAF2-202ENST00000553851 RNF20Q5VTR2 975 aa23.44■■□□□ 1.34
PRAF2-202ENST00000553851 ARHGEF16Q5VV41 709 aa23.44■■□□□ 1.34
PRAF2-202ENST00000553851 CTCFLQ8NI51 663 aaPredicted RBP23.44■■□□□ 1.34
PRAF2-202ENST00000553851 CCDC69A6NI79 296 aa23.43■■□□□ 1.34
PRAF2-202ENST00000553851 NKRFO15226 690 aaKnown RBP eCLIP23.43■■□□□ 1.34
PRAF2-202ENST00000553851 TXNP10599 105 aaKnown RBP23.43■■□□□ 1.34
PRAF2-202ENST00000553851 EIF2AK2P19525 551 aaKnown RBP23.43■■□□□ 1.34
PRAF2-202ENST00000553851 HSD17B4P51659 736 aa23.43■■□□□ 1.34
PRAF2-202ENST00000553851 ITGA7Q13683 1181 aa23.43■■□□□ 1.34
PRAF2-202ENST00000553851 TTLL4Q14679 1199 aa23.43■■□□□ 1.34
PRAF2-202ENST00000553851 STXBP2Q15833 593 aa23.43■■□□□ 1.34
PRAF2-202ENST00000553851 SLC43A3Q8NBI5 491 aa23.43■■□□□ 1.34
PRAF2-202ENST00000553851 PIBF1Q8WXW3 757 aa23.43■■□□□ 1.34
PRAF2-202ENST00000553851 COPS5Q92905 334 aa23.43■■□□□ 1.34
PRAF2-202ENST00000553851 TLR3O15455 904 aaKnown RBP23.42■■□□□ 1.34
PRAF2-202ENST00000553851 KIF5BP33176 963 aa23.42■■□□□ 1.34
PRAF2-202ENST00000553851 CPT1AP50416 773 aa23.42■■□□□ 1.34
PRAF2-202ENST00000553851 GHRHRQ02643 423 aa23.42■■□□□ 1.34
PRAF2-202ENST00000553851 SEPT14Q6ZU15 432 aa23.42■■□□□ 1.34
PRAF2-202ENST00000553851 FAM126BQ8IXS8 530 aa23.42■■□□□ 1.34
PRAF2-202ENST00000553851 LRRC2Q9BYS8 371 aa23.42■■□□□ 1.34
PRAF2-202ENST00000553851 PXMP2Q9NR77 195 aa23.42■■□□□ 1.34
PRAF2-202ENST00000553851 MAP3K20Q9NYL2 800 aaKnown RBP23.42■■□□□ 1.34
PRAF2-202ENST00000553851 TBX21Q9UL17 535 aa23.42■■□□□ 1.34
PRAF2-202ENST00000553851 GRIN2DO15399 1336 aa23.42■■□□□ 1.34
PRAF2-202ENST00000553851 ARIH2O95376 493 aa23.41■■□□□ 1.34
PRAF2-202ENST00000553851 NEFLP07196 543 aa23.41■■□□□ 1.34
PRAF2-202ENST00000553851 LIFRP42702 1097 aa23.41■■□□□ 1.34
PRAF2-202ENST00000553851 PSMC6P62333 389 aa23.41■■□□□ 1.34
PRAF2-202ENST00000553851 SHHQ15465 462 aa23.41■■□□□ 1.34
PRAF2-202ENST00000553851 SAMD3Q8N6K7 520 aa23.41■■□□□ 1.34
PRAF2-202ENST00000553851 POLR3EQ9NVU0 708 aa23.41■■□□□ 1.34
PRAF2-202ENST00000553851 TIMP1P01033 207 aa23.4■■□□□ 1.34
PRAF2-202ENST00000553851 NR3C2P08235 984 aa23.4■■□□□ 1.34
PRAF2-202ENST00000553851 MYL3P08590 195 aa23.4■■□□□ 1.34
PRAF2-202ENST00000553851 HOXA13P31271 388 aaPredicted RBP23.4■■□□□ 1.34
PRAF2-202ENST00000553851 BRDTQ58F21 947 aaPredicted RBP23.4■■□□□ 1.34
PRAF2-202ENST00000553851 C9orf50Q5SZB4 431 aa23.4■■□□□ 1.34
PRAF2-202ENST00000553851 CCDC62Q6P9F0 684 aa23.4■■□□□ 1.34
PRAF2-202ENST00000553851 LZTS2Q9BRK4 669 aa23.4■■□□□ 1.34
PRAF2-202ENST00000553851 SPZ1Q9BXG8 430 aa23.4■■□□□ 1.34
PRAF2-202ENST00000553851 GCOM1H8Y6P7 765 aaPredicted RBP23.39■■□□□ 1.34
PRAF2-202ENST00000553851 EIF3JO75822 258 aaKnown RBP23.39■■□□□ 1.34
PRAF2-202ENST00000553851 CD4P01730 458 aa23.39■■□□□ 1.34
PRAF2-202ENST00000553851 POLR2MP0CAP2 368 aa23.39■■□□□ 1.34
PRAF2-202ENST00000553851 RXRAP19793 462 aa23.39■■□□□ 1.34
PRAF2-202ENST00000553851 SMARCA1P28370 1054 aa23.39■■□□□ 1.34
PRAF2-202ENST00000553851 GNAQP50148 359 aa23.39■■□□□ 1.34
PRAF2-202ENST00000553851 FPGSQ05932 587 aa23.39■■□□□ 1.34
PRAF2-202ENST00000553851 GPR153Q6NV75 609 aa23.39■■□□□ 1.34
PRAF2-202ENST00000553851 NEK1Q96PY6 1258 aa23.39■■□□□ 1.34
PRAF2-202ENST00000553851 SEZ6LQ9BYH1 1024 aa23.39■■□□□ 1.34
PRAF2-202ENST00000553851 SLC12A7Q9Y666 1083 aa23.39■■□□□ 1.34
PRAF2-202ENST00000553851 CALM1P0DP23 149 aa23.38■■□□□ 1.33
PRAF2-202ENST00000553851 CALM2P0DP24 149 aa23.38■■□□□ 1.33
PRAF2-202ENST00000553851 CALM3P0DP25 149 aa23.38■■□□□ 1.33
PRAF2-202ENST00000553851 PURAQ00577 322 aaKnown RBP23.38■■□□□ 1.33
PRAF2-202ENST00000553851 LY6KQ17RY6 165 aa23.38■■□□□ 1.33
PRAF2-202ENST00000553851 RAB11FIP4Q86YS3 637 aa23.38■■□□□ 1.33
PRAF2-202ENST00000553851 RASEFQ8IZ41 740 aa23.38■■□□□ 1.33
PRAF2-202ENST00000553851 RRP36Q96EU6 259 aaKnown RBP23.38■■□□□ 1.33
PRAF2-202ENST00000553851 A6NJR5 290 aa23.37■■□□□ 1.33
PRAF2-202ENST00000553851 PLEKHA8P1O95397 391 aa23.37■■□□□ 1.33
PRAF2-202ENST00000553851 MYCLP12524 364 aaPredicted RBP23.37■■□□□ 1.33
PRAF2-202ENST00000553851 EPHB4P54760 987 aa23.37■■□□□ 1.33
PRAF2-202ENST00000553851 TSGA10IPQ3SY00 556 aa23.37■■□□□ 1.33
PRAF2-202ENST00000553851 FCHSD1Q86WN1 690 aa23.37■■□□□ 1.33
PRAF2-202ENST00000553851 SRBD1Q8N5C6 995 aaKnown RBP23.37■■□□□ 1.33
PRAF2-202ENST00000553851 PDCD2LQ9BRP1 358 aa23.37■■□□□ 1.33
PRAF2-202ENST00000553851 MTG1Q9BT17 334 aaPredicted RBP23.37■■□□□ 1.33
PRAF2-202ENST00000553851 KPNA6O60684 536 aa23.36■■□□□ 1.33
PRAF2-202ENST00000553851 MFSD5Q6N075 450 aa23.36■■□□□ 1.33
PRAF2-202ENST00000553851 CMTR1Q8N1G2 835 aaKnown RBP23.36■■□□□ 1.33
PRAF2-202ENST00000553851 PPP1R12CQ9BZL4 782 aa23.36■■□□□ 1.33
PRAF2-202ENST00000553851 TRPV6Q9H1D0 765 aa23.36■■□□□ 1.33
PRAF2-202ENST00000553851 SEC63Q9UGP8 760 aaKnown RBP23.36■■□□□ 1.33
PRAF2-202ENST00000553851 GH1P01241 217 aa23.35■■□□□ 1.33
PRAF2-202ENST00000553851 EXOSC10Q01780 885 aaKnown RBP23.35■■□□□ 1.33
PRAF2-202ENST00000553851 PGM5Q15124 567 aa23.35■■□□□ 1.33
PRAF2-202ENST00000553851 ADCK5Q3MIX3 580 aa23.35■■□□□ 1.33
PRAF2-202ENST00000553851 DHX32Q7L7V1 743 aaKnown RBP23.35■■□□□ 1.33
PRAF2-202ENST00000553851 VSIG10LQ86VR7 867 aa23.35■■□□□ 1.33
PRAF2-202ENST00000553851 SGMS1Q86VZ5 419 aa23.35■■□□□ 1.33
PRAF2-202ENST00000553851 AFG1LQ8WV93 481 aa23.35■■□□□ 1.33
PRAF2-202ENST00000553851 DDX41Q9UJV9 622 aaKnown RBP23.35■■□□□ 1.33
PRAF2-202ENST00000553851 B4GALT4O60513 344 aa23.34■■□□□ 1.33
PRAF2-202ENST00000553851 ARHGAP1Q07960 439 aa23.34■■□□□ 1.33
PRAF2-202ENST00000553851 KRT32Q14532 448 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms