RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 CTAGE5O15320 804 aa11.82□□□□□ -0.52
HNRNPC-208ENST00000553753 DYNC1LI2O43237 492 aaPredicted RBP11.82□□□□□ -0.52
HNRNPC-208ENST00000553753 PLEKHA8P1O95397 391 aa11.82□□□□□ -0.52
HNRNPC-208ENST00000553753 ASGR1P07306 291 aa11.82□□□□□ -0.52
HNRNPC-208ENST00000553753 DUSP28Q4G0W2 176 aa11.82□□□□□ -0.52
HNRNPC-208ENST00000553753 TMEM63BQ5T3F8 832 aa11.82□□□□□ -0.52
HNRNPC-208ENST00000553753 ARHGEF16Q5VV41 709 aa11.82□□□□□ -0.52
HNRNPC-208ENST00000553753 RAB11FIP4Q86YS3 637 aa11.82□□□□□ -0.52
HNRNPC-208ENST00000553753 GLT1D1Q96MS3 346 aa11.82□□□□□ -0.52
HNRNPC-208ENST00000553753 JAKMIP1Q96N16 626 aaKnown RBP11.82□□□□□ -0.52
HNRNPC-208ENST00000553753 AP5M1Q9H0R1 490 aa11.82□□□□□ -0.52
HNRNPC-208ENST00000553753 STARD7Q9NQZ5 370 aa11.82□□□□□ -0.52
HNRNPC-208ENST00000553753 SEC63Q9UGP8 760 aaKnown RBP11.82□□□□□ -0.52
HNRNPC-208ENST00000553753 ATP11BQ9Y2G3 1177 aa11.82□□□□□ -0.52
HNRNPC-208ENST00000553753 TRIOBPQ9H2D6 2365 aa11.82□□□□□ -0.52
HNRNPC-208ENST00000553753 CPA1P15085 419 aa11.81□□□□□ -0.52
HNRNPC-208ENST00000553753 PTGS1P23219 599 aa11.81□□□□□ -0.52
HNRNPC-208ENST00000553753 HOXA13P31271 388 aaPredicted RBP11.81□□□□□ -0.52
HNRNPC-208ENST00000553753 FGD1P98174 961 aa11.81□□□□□ -0.52
HNRNPC-208ENST00000553753 BEX3Q00994 111 aa11.81□□□□□ -0.52
HNRNPC-208ENST00000553753 STXBP2Q15833 593 aa11.81□□□□□ -0.52
HNRNPC-208ENST00000553753 TRIM60Q495X7 471 aa11.81□□□□□ -0.52
HNRNPC-208ENST00000553753 HABP4Q5JVS0 413 aaKnown RBP11.81□□□□□ -0.52
HNRNPC-208ENST00000553753 BLOC1S2Q6QNY1 142 aa11.81□□□□□ -0.52
HNRNPC-208ENST00000553753 CCDC82Q8N4S0 544 aa11.81□□□□□ -0.52
HNRNPC-208ENST00000553753 SCFD2Q8WU76 684 aa11.81□□□□□ -0.52
HNRNPC-208ENST00000553753 PXMP2Q9NR77 195 aa11.81□□□□□ -0.52
HNRNPC-208ENST00000553753 RBM27Q9P2N5 1060 aaKnown RBP11.81□□□□□ -0.52
HNRNPC-208ENST00000553753 BRPF3Q9ULD4 1205 aa11.81□□□□□ -0.52
HNRNPC-208ENST00000553753 ELP1O95163 1332 aa11.81□□□□□ -0.52
HNRNPC-208ENST00000553753 LRRC37A2A6NM11 1700 aa11.8□□□□□ -0.52
HNRNPC-208ENST00000553753 GCOM1H8Y6P7 765 aaPredicted RBP11.8□□□□□ -0.52
HNRNPC-208ENST00000553753 ZBTB43O43298 467 aa11.8□□□□□ -0.52
HNRNPC-208ENST00000553753 POLR2MP0CAP2 368 aa11.8□□□□□ -0.52
HNRNPC-208ENST00000553753 EIF2AK2P19525 551 aaKnown RBP11.8□□□□□ -0.52
HNRNPC-208ENST00000553753 PSMA5P28066 241 aa11.8□□□□□ -0.52
HNRNPC-208ENST00000553753 FSCN1Q16658 493 aaKnown RBP11.8□□□□□ -0.52
HNRNPC-208ENST00000553753 TMTC3Q6ZXV5 915 aa11.8□□□□□ -0.52
HNRNPC-208ENST00000553753 USP26Q9BXU7 913 aa11.8□□□□□ -0.52
HNRNPC-208ENST00000553753 PRO3102Q9H379 93 aa11.8□□□□□ -0.52
HNRNPC-208ENST00000553753 RBM28Q9NW13 759 aaKnown RBP11.8□□□□□ -0.52
HNRNPC-208ENST00000553753 PRKAG2Q9UGJ0 569 aa11.8□□□□□ -0.52
HNRNPC-208ENST00000553753 KLF18A0A0U1RQI7 1052 aa11.79□□□□□ -0.52
HNRNPC-208ENST00000553753 EIF3JO75822 258 aaKnown RBP11.79□□□□□ -0.52
HNRNPC-208ENST00000553753 NR3C2P08235 984 aa11.79□□□□□ -0.52
HNRNPC-208ENST00000553753 TLE2Q04725 743 aa11.79□□□□□ -0.52
HNRNPC-208ENST00000553753 TTLL4Q14679 1199 aa11.79□□□□□ -0.52
HNRNPC-208ENST00000553753 PPP2R5BQ15173 497 aa11.79□□□□□ -0.52
HNRNPC-208ENST00000553753 Q6ZUG5 572 aa11.79□□□□□ -0.52
HNRNPC-208ENST00000553753 VTI1AQ96AJ9 217 aa11.79□□□□□ -0.52
HNRNPC-208ENST00000553753 GDF15Q99988 308 aa11.79□□□□□ -0.52
HNRNPC-208ENST00000553753 NKRFO15226 690 aaKnown RBP eCLIP11.79□□□□□ -0.52
HNRNPC-208ENST00000553753 ZEB2O60315 1214 aa11.79□□□□□ -0.52
HNRNPC-208ENST00000553753 TXNP10599 105 aaKnown RBP11.79□□□□□ -0.52
HNRNPC-208ENST00000553753 CASTP20810 708 aaKnown RBP11.79□□□□□ -0.52
HNRNPC-208ENST00000553753 RPS6KB1P23443 525 aa11.79□□□□□ -0.52
HNRNPC-208ENST00000553753 RCAN1P53805 252 aa11.79□□□□□ -0.52
HNRNPC-208ENST00000553753 RTN1Q16799 776 aa11.79□□□□□ -0.52
HNRNPC-208ENST00000553753 CXCL17Q6UXB2 119 aa11.79□□□□□ -0.52
HNRNPC-208ENST00000553753 SEPT14Q6ZU15 432 aa11.79□□□□□ -0.52
HNRNPC-208ENST00000553753 FCHSD1Q86WN1 690 aa11.79□□□□□ -0.52
HNRNPC-208ENST00000553753 FBXL16Q8N461 479 aa11.79□□□□□ -0.52
HNRNPC-208ENST00000553753 PDCD2LQ9BRP1 358 aa11.79□□□□□ -0.52
HNRNPC-208ENST00000553753 hCG_1642624A0A1W2PR95 340 aa11.78□□□□□ -0.52
HNRNPC-208ENST00000553753 PQBP1O60828 265 aaKnown RBP11.78□□□□□ -0.52
HNRNPC-208ENST00000553753 CABYRO75952 493 aa11.78□□□□□ -0.52
HNRNPC-208ENST00000553753 BMP8BP34820 402 aa11.78□□□□□ -0.52
HNRNPC-208ENST00000553753 MAGEA10P43363 369 aaPredicted RBP11.78□□□□□ -0.52
HNRNPC-208ENST00000553753 CPT1AP50416 773 aa11.78□□□□□ -0.52
HNRNPC-208ENST00000553753 CCDC62Q6P9F0 684 aa11.78□□□□□ -0.52
HNRNPC-208ENST00000553753 ANKRD33Q7Z3H0 272 aa11.78□□□□□ -0.52
HNRNPC-208ENST00000553753 OR6J1Q8NGC5 347 aa11.78□□□□□ -0.52
HNRNPC-208ENST00000553753 BRF1Q92994 677 aa11.78□□□□□ -0.52
HNRNPC-208ENST00000553753 TOX2Q96NM4 488 aa11.78□□□□□ -0.52
HNRNPC-208ENST00000553753 PRDM5Q9NQX1 630 aaPredicted RBP11.78□□□□□ -0.52
HNRNPC-208ENST00000553753 PCDH10Q9P2E7 1040 aa11.78□□□□□ -0.52
HNRNPC-208ENST00000553753 NAP1L2Q9ULW6 460 aaPredicted RBP11.78□□□□□ -0.52
HNRNPC-208ENST00000553753 A0A0U1RQG5 324 aaPredicted RBP11.77□□□□□ -0.52
HNRNPC-208ENST00000553753 GOLGA8AA7E2F4 631 aa11.77□□□□□ -0.52
HNRNPC-208ENST00000553753 GOLGA8BA8MQT2 603 aa11.77□□□□□ -0.52
HNRNPC-208ENST00000553753 PIK3CDO00329 1044 aa11.77□□□□□ -0.52
HNRNPC-208ENST00000553753 ARIH2O95376 493 aa11.77□□□□□ -0.52
HNRNPC-208ENST00000553753 MYCLP12524 364 aaPredicted RBP11.77□□□□□ -0.52
HNRNPC-208ENST00000553753 CDK7P50613 346 aa11.77□□□□□ -0.52
HNRNPC-208ENST00000553753 MDM2Q00987 491 aaPredicted RBP11.77□□□□□ -0.52
HNRNPC-208ENST00000553753 APOBRQ0VD83 1088 aa11.77□□□□□ -0.52
HNRNPC-208ENST00000553753 PGM5Q15124 567 aa11.77□□□□□ -0.52
HNRNPC-208ENST00000553753 BRDTQ58F21 947 aaPredicted RBP11.77□□□□□ -0.52
HNRNPC-208ENST00000553753 RUFY3Q7L099 469 aa11.77□□□□□ -0.52
HNRNPC-208ENST00000553753 VSIG10LQ86VR7 867 aa11.77□□□□□ -0.52
HNRNPC-208ENST00000553753 LBHD1Q9BQE6 289 aaPredicted RBP11.77□□□□□ -0.52
HNRNPC-208ENST00000553753 AGXT2Q9BYV1 514 aa11.77□□□□□ -0.52
HNRNPC-208ENST00000553753 PDLIM7Q9NR12 457 aa11.77□□□□□ -0.52
HNRNPC-208ENST00000553753 FAM217BQ9NTX9 383 aaPredicted RBP11.77□□□□□ -0.52
HNRNPC-208ENST00000553753 MROH7Q68CQ1 1323 aa11.77□□□□□ -0.53
HNRNPC-208ENST00000553753 CCDC196A0A1B0GTZ2 297 aa11.77□□□□□ -0.53
HNRNPC-208ENST00000553753 A0A1W2PPC1 479 aa11.77□□□□□ -0.53
HNRNPC-208ENST00000553753 A6NJR5 290 aa11.77□□□□□ -0.53
HNRNPC-208ENST00000553753 DCDC2CA8MYV0 355 aa11.77□□□□□ -0.53
HNRNPC-208ENST00000553753 ARVCFO00192 962 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms