RNA–Protein interactions for RNA: ENST00000553747.5

LINC00648-201, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-201ENST00000553747 STXBP3O00186 592 aa5.17□□□□□ -1.58
LINC00648-201ENST00000553747 VAMP4O75379 141 aa5.17□□□□□ -1.58
LINC00648-201ENST00000553747 ITGB3P05106 788 aa5.17□□□□□ -1.58
LINC00648-201ENST00000553747 SEPHS1P49903 392 aa5.17□□□□□ -1.58
LINC00648-201ENST00000553747 AMPD2Q01433 879 aa5.17□□□□□ -1.58
LINC00648-201ENST00000553747 CAP1Q01518 475 aa5.17□□□□□ -1.58
LINC00648-201ENST00000553747 GRB10Q13322 594 aa5.17□□□□□ -1.58
LINC00648-201ENST00000553747 ARHGEF39Q8N4T4 335 aa5.17□□□□□ -1.58
LINC00648-201ENST00000553747 CRACR2BQ8N4Y2 399 aaPredicted RBP5.17□□□□□ -1.58
LINC00648-201ENST00000553747 SORCS2Q96PQ0 1159 aa5.17□□□□□ -1.58
LINC00648-201ENST00000553747 ACTR10Q9NZ32 417 aa5.17□□□□□ -1.58
LINC00648-201ENST00000553747 AKT3Q9Y243 479 aa5.17□□□□□ -1.58
LINC00648-201ENST00000553747 C2orf71A6NGG8 1288 aa5.16□□□□□ -1.58
LINC00648-201ENST00000553747 NOP56O00567 594 aaKnown RBP5.16□□□□□ -1.58
LINC00648-201ENST00000553747 AURKAO14965 403 aa5.16□□□□□ -1.58
LINC00648-201ENST00000553747 SMAD7O15105 426 aaKnown RBP5.16□□□□□ -1.58
LINC00648-201ENST00000553747 L1CAMP32004 1257 aa5.16□□□□□ -1.58
LINC00648-201ENST00000553747 MC3RP41968 323 aa5.16□□□□□ -1.58
LINC00648-201ENST00000553747 MAPKAPK2P49137 400 aa5.16□□□□□ -1.58
LINC00648-201ENST00000553747 HMGA2P52926 109 aa5.16□□□□□ -1.58
LINC00648-201ENST00000553747 MVKQ03426 396 aa5.16□□□□□ -1.58
LINC00648-201ENST00000553747 ARID5AQ03989 594 aa5.16□□□□□ -1.58
LINC00648-201ENST00000553747 RCSD1Q6JBY9 416 aa5.16□□□□□ -1.58
LINC00648-201ENST00000553747 POMZP3Q6PJE2 187 aa5.16□□□□□ -1.58
LINC00648-201ENST00000553747 PPP1R14AQ96A00 147 aa5.16□□□□□ -1.58
LINC00648-201ENST00000553747 C8orf49Q96NF6 230 aa5.16□□□□□ -1.58
LINC00648-201ENST00000553747 KRTAP3-1Q9BYR8 98 aa5.16□□□□□ -1.58
LINC00648-201ENST00000553747 BACE2Q9Y5Z0 518 aa5.16□□□□□ -1.58
LINC00648-201ENST00000553747 NOBOXO60393 691 aa5.15□□□□□ -1.59
LINC00648-201ENST00000553747 FBLN1P23142 703 aa5.15□□□□□ -1.59
LINC00648-201ENST00000553747 ZNF143P52747 638 aaPredicted RBP5.15□□□□□ -1.59
LINC00648-201ENST00000553747 CORO7P57737 925 aa5.15□□□□□ -1.59
LINC00648-201ENST00000553747 DLX2Q07687 328 aaPredicted RBP5.15□□□□□ -1.59
LINC00648-201ENST00000553747 NR1I3Q14994 352 aa5.15□□□□□ -1.59
LINC00648-201ENST00000553747 LARP1BQ659C4 914 aaKnown RBP5.15□□□□□ -1.59
LINC00648-201ENST00000553747 BICRALQ6AI39 1079 aa5.15□□□□□ -1.59
LINC00648-201ENST00000553747 SAPCD2Q86UD0 394 aa5.15□□□□□ -1.59
LINC00648-201ENST00000553747 BVESQ8NE79 360 aa5.15□□□□□ -1.59
LINC00648-201ENST00000553747 LOXL4Q96JB6 756 aa5.15□□□□□ -1.59
LINC00648-201ENST00000553747 RBM15Q96T37 977 aaKnown RBP eCLIP5.15□□□□□ -1.59
LINC00648-201ENST00000553747 MCMBPQ9BTE3 642 aa5.15□□□□□ -1.59
LINC00648-201ENST00000553747 PDLIM7Q9NR12 457 aa5.15□□□□□ -1.59
LINC00648-201ENST00000553747 APEX2Q9UBZ4 518 aa5.15□□□□□ -1.59
LINC00648-201ENST00000553747 PRKAG3Q9UGI9 489 aa5.15□□□□□ -1.59
LINC00648-201ENST00000553747 TRBV23OR9-2A0A075B6M9 112 aa5.14□□□□□ -1.59
LINC00648-201ENST00000553747 KCNH1O95259 989 aa5.14□□□□□ -1.59
LINC00648-201ENST00000553747 ZNF20P17024 532 aa5.14□□□□□ -1.59
LINC00648-201ENST00000553747 DNAJA1P31689 397 aaKnown RBP5.14□□□□□ -1.59
LINC00648-201ENST00000553747 TARBP2Q15633 366 aaKnown RBP5.14□□□□□ -1.59
LINC00648-201ENST00000553747 FXNQ16595 210 aa5.14□□□□□ -1.59
LINC00648-201ENST00000553747 CPZQ66K79 652 aa5.14□□□□□ -1.59
LINC00648-201ENST00000553747 C6orf15Q6UXA7 325 aaPredicted RBP5.14□□□□□ -1.59
LINC00648-201ENST00000553747 FAM178BQ8IXR5 827 aa5.14□□□□□ -1.59
LINC00648-201ENST00000553747 NLGN2Q8NFZ4 835 aa5.14□□□□□ -1.59
LINC00648-201ENST00000553747 TINF2Q9BSI4 451 aa5.14□□□□□ -1.59
LINC00648-201ENST00000553747 MENTQ9BUN1 341 aa5.14□□□□□ -1.59
LINC00648-201ENST00000553747 LNPKQ9C0E8 428 aa5.14□□□□□ -1.59
LINC00648-201ENST00000553747 FAN1Q9Y2M0 1017 aa5.14□□□□□ -1.59
LINC00648-201ENST00000553747 EMC9Q9Y3B6 208 aa5.14□□□□□ -1.59
LINC00648-201ENST00000553747 R3HCC1Q9Y3T6 440 aaKnown RBP5.14□□□□□ -1.59
LINC00648-201ENST00000553747 NPHP3-ACAD11A0A0J9YXS1 232 aa5.13□□□□□ -1.59
LINC00648-201ENST00000553747 DDAH1O94760 285 aa5.13□□□□□ -1.59
LINC00648-201ENST00000553747 SLPIP03973 132 aa5.13□□□□□ -1.59
LINC00648-201ENST00000553747 CYBBP04839 570 aa5.13□□□□□ -1.59
LINC00648-201ENST00000553747 DBHP09172 617 aa5.13□□□□□ -1.59
LINC00648-201ENST00000553747 C6P13671 934 aa5.13□□□□□ -1.59
LINC00648-201ENST00000553747 PAMP19021 973 aa5.13□□□□□ -1.59
LINC00648-201ENST00000553747 TACR1P25103 407 aa5.13□□□□□ -1.59
LINC00648-201ENST00000553747 ETFBP38117 255 aa5.13□□□□□ -1.59
LINC00648-201ENST00000553747 HTRA3P83110 453 aa5.13□□□□□ -1.59
LINC00648-201ENST00000553747 PAQR3Q6TCH7 311 aa5.13□□□□□ -1.59
LINC00648-201ENST00000553747 CABP7Q86V35 215 aa5.13□□□□□ -1.59
LINC00648-201ENST00000553747 ZFPM1Q8IX07 1006 aa5.13□□□□□ -1.59
LINC00648-201ENST00000553747 CARFQ8N187 725 aa5.13□□□□□ -1.59
LINC00648-201ENST00000553747 MRIQ9BWK5 157 aa5.13□□□□□ -1.59
LINC00648-201ENST00000553747 BCAS3Q9H6U6 928 aa5.13□□□□□ -1.59
LINC00648-201ENST00000553747 DBR1Q9UK59 544 aaKnown RBP5.13□□□□□ -1.59
LINC00648-201ENST00000553747 SH3D21A4FU49 640 aa5.12□□□□□ -1.59
LINC00648-201ENST00000553747 SRGAP3O43295 1099 aa5.12□□□□□ -1.59
LINC00648-201ENST00000553747 FGRP09769 529 aa5.12□□□□□ -1.59
LINC00648-201ENST00000553747 GJA9P57773 515 aa5.12□□□□□ -1.59
LINC00648-201ENST00000553747 ZC3H6P61129 1189 aaKnown RBP5.12□□□□□ -1.59
LINC00648-201ENST00000553747 SCRN1Q12765 414 aa5.12□□□□□ -1.59
LINC00648-201ENST00000553747 SV2CQ496J9 727 aa5.12□□□□□ -1.59
LINC00648-201ENST00000553747 SPRED1Q7Z699 444 aa5.12□□□□□ -1.59
LINC00648-201ENST00000553747 CPNE8Q86YQ8 564 aa5.12□□□□□ -1.59
LINC00648-201ENST00000553747 ZNF513Q8N8E2 541 aaPredicted RBP5.12□□□□□ -1.59
LINC00648-201ENST00000553747 SLC43A3Q8NBI5 491 aa5.12□□□□□ -1.59
LINC00648-201ENST00000553747 USP33Q8TEY7 942 aa5.12□□□□□ -1.59
LINC00648-201ENST00000553747 ZNF408Q9H9D4 720 aa5.12□□□□□ -1.59
LINC00648-201ENST00000553747 RXFP1Q9HBX9 757 aa5.12□□□□□ -1.59
LINC00648-201ENST00000553747 LRP2BPQ9P2M1 347 aa5.12□□□□□ -1.59
LINC00648-201ENST00000553747 B2RBV5 119 aa5.11□□□□□ -1.59
LINC00648-201ENST00000553747 F8W031 263 aaPredicted RBP5.11□□□□□ -1.59
LINC00648-201ENST00000553747 PRR5P85299 388 aa5.11□□□□□ -1.59
LINC00648-201ENST00000553747 GTF2IRD2BQ6EKJ0 949 aa5.11□□□□□ -1.59
LINC00648-201ENST00000553747 GTF2IRD2Q86UP8 949 aa5.11□□□□□ -1.59
LINC00648-201ENST00000553747 MCF2L2Q86YR7 1114 aa5.11□□□□□ -1.59
LINC00648-201ENST00000553747 TRIM59Q8IWR1 403 aa5.11□□□□□ -1.59
LINC00648-201ENST00000553747 Q8N1X5 172 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms