RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 FOSP01100 380 aaPredicted RBP20.65■□□□□ 0.9
PSEN1-208ENST00000553719 XRCC5P13010 732 aaKnown RBP20.65■□□□□ 0.9
PSEN1-208ENST00000553719 EDNRBP24530 442 aa20.65■□□□□ 0.9
PSEN1-208ENST00000553719 RGS2P41220 211 aa20.65■□□□□ 0.9
PSEN1-208ENST00000553719 FLT3LGP49771 235 aa20.65■□□□□ 0.9
PSEN1-208ENST00000553719 EARS2Q5JPH6 523 aaKnown RBP20.65■□□□□ 0.9
PSEN1-208ENST00000553719 JAKMIP3Q5VZ66 844 aa20.65■□□□□ 0.9
PSEN1-208ENST00000553719 MCTP2Q6DN12 878 aa20.65■□□□□ 0.9
PSEN1-208ENST00000553719 OTOP1Q7RTM1 612 aa20.65■□□□□ 0.9
PSEN1-208ENST00000553719 MORC4Q8TE76 937 aa20.65■□□□□ 0.9
PSEN1-208ENST00000553719 MAML3Q96JK9 1138 aa20.65■□□□□ 0.9
PSEN1-208ENST00000553719 IPO9Q96P70 1041 aaKnown RBP20.65■□□□□ 0.9
PSEN1-208ENST00000553719 APBA2Q99767 749 aa20.65■□□□□ 0.9
PSEN1-208ENST00000553719 ANO3Q9BYT9 981 aa20.65■□□□□ 0.9
PSEN1-208ENST00000553719 FOXP1Q9H334 677 aaPredicted RBP20.65■□□□□ 0.9
PSEN1-208ENST00000553719 PXMP2Q9NR77 195 aa20.65■□□□□ 0.9
PSEN1-208ENST00000553719 LOC102724159A0A0B4J2E5 919 aa20.64■□□□□ 0.89
PSEN1-208ENST00000553719 ALDH5A1P51649 535 aaPredicted RBP20.64■□□□□ 0.89
PSEN1-208ENST00000553719 IRF5Q13568 498 aa20.64■□□□□ 0.89
PSEN1-208ENST00000553719 PWP2Q15269 919 aaKnown RBP20.64■□□□□ 0.89
PSEN1-208ENST00000553719 MAMDC4Q6UXC1 1216 aa20.64■□□□□ 0.89
PSEN1-208ENST00000553719 FCHSD1Q86WN1 690 aa20.64■□□□□ 0.89
PSEN1-208ENST00000553719 PGBD1Q96JS3 809 aa20.64■□□□□ 0.89
PSEN1-208ENST00000553719 BRMS1Q9HCU9 246 aa20.64■□□□□ 0.89
PSEN1-208ENST00000553719 MYH7BA7E2Y1 1941 aa20.64■□□□□ 0.89
PSEN1-208ENST00000553719 SPDYE3A6NKU9 549 aa20.63■□□□□ 0.89
PSEN1-208ENST00000553719 H3BQV1 296 aa20.63■□□□□ 0.89
PSEN1-208ENST00000553719 EDIL3O43854 480 aa20.63■□□□□ 0.89
PSEN1-208ENST00000553719 PDIA4P13667 645 aaKnown RBP20.63■□□□□ 0.89
PSEN1-208ENST00000553719 SREBF1P36956 1147 aa20.63■□□□□ 0.89
PSEN1-208ENST00000553719 LBX1P52954 281 aa20.63■□□□□ 0.89
PSEN1-208ENST00000553719 PRMT2P55345 433 aa20.63■□□□□ 0.89
PSEN1-208ENST00000553719 PKP1Q13835 747 aa20.63■□□□□ 0.89
PSEN1-208ENST00000553719 ARHGEF6Q15052 776 aa20.63■□□□□ 0.89
PSEN1-208ENST00000553719 SAFBQ15424 915 aaKnown RBP eCLIP20.63■□□□□ 0.89
PSEN1-208ENST00000553719 IFFO2Q5TF58 517 aa20.63■□□□□ 0.89
PSEN1-208ENST00000553719 DPP9Q86TI2 863 aa20.63■□□□□ 0.89
PSEN1-208ENST00000553719 IL31RAQ8NI17 732 aa20.63■□□□□ 0.89
PSEN1-208ENST00000553719 NSUN6Q8TEA1 469 aaKnown RBP20.63■□□□□ 0.89
PSEN1-208ENST00000553719 RMDN3Q96TC7 470 aa20.63■□□□□ 0.89
PSEN1-208ENST00000553719 PDCD2LQ9BRP1 358 aa20.63■□□□□ 0.89
PSEN1-208ENST00000553719 FLRT1Q9NZU1 646 aa20.63■□□□□ 0.89
PSEN1-208ENST00000553719 ADD3Q9UEY8 706 aaKnown RBP20.63■□□□□ 0.89
PSEN1-208ENST00000553719 MCM3APO60318 1980 aa20.63■□□□□ 0.89
PSEN1-208ENST00000553719 FAM205CA6NFA0 338 aa20.62■□□□□ 0.89
PSEN1-208ENST00000553719 HOXD10P28358 340 aa20.62■□□□□ 0.89
PSEN1-208ENST00000553719 PGM5Q15124 567 aa20.62■□□□□ 0.89
PSEN1-208ENST00000553719 OLFML2BQ68BL8 750 aa20.62■□□□□ 0.89
PSEN1-208ENST00000553719 KRT25Q7Z3Z0 450 aa20.62■□□□□ 0.89
PSEN1-208ENST00000553719 SLC5A4Q9NY91 659 aa20.62■□□□□ 0.89
PSEN1-208ENST00000553719 VPS37CA5D8V6 355 aaPredicted RBP20.61■□□□□ 0.89
PSEN1-208ENST00000553719 EIF2AK2P19525 551 aaKnown RBP20.61■□□□□ 0.89
PSEN1-208ENST00000553719 CYP2B6P20813 491 aa20.61■□□□□ 0.89
PSEN1-208ENST00000553719 RESTQ13127 1097 aa20.61■□□□□ 0.89
PSEN1-208ENST00000553719 CCL14Q16627 93 aa20.61■□□□□ 0.89
PSEN1-208ENST00000553719 NOSTRINQ8IVI9 506 aa20.61■□□□□ 0.89
PSEN1-208ENST00000553719 MSL3Q8N5Y2 521 aaKnown RBP20.61■□□□□ 0.89
PSEN1-208ENST00000553719 IWS1Q96ST2 819 aa20.61■□□□□ 0.89
PSEN1-208ENST00000553719 ZDHHC9Q9Y397 364 aa20.61■□□□□ 0.89
PSEN1-208ENST00000553719 DDX49Q9Y6V7 483 aaKnown RBP20.61■□□□□ 0.89
PSEN1-208ENST00000553719 CENPFP49454 3210 aa20.61■□□□□ 0.89
PSEN1-208ENST00000553719 SYNGAP1Q96PV0 1343 aa20.6■□□□□ 0.89
PSEN1-208ENST00000553719 BRD1O95696 1058 aa20.6■□□□□ 0.89
PSEN1-208ENST00000553719 CYP3A4P08684 503 aa20.6■□□□□ 0.89
PSEN1-208ENST00000553719 NONOQ15233 471 aaKnown RBP eCLIP20.6■□□□□ 0.89
PSEN1-208ENST00000553719 PCNX4Q63HM2 1172 aa20.6■□□□□ 0.89
PSEN1-208ENST00000553719 PIK3AP1Q6ZUJ8 805 aa20.6■□□□□ 0.89
PSEN1-208ENST00000553719 TRIB2Q92519 343 aa20.6■□□□□ 0.89
PSEN1-208ENST00000553719 KATNBL1Q9H079 304 aa20.6■□□□□ 0.89
PSEN1-208ENST00000553719 TRIM17Q9Y577 477 aa20.6■□□□□ 0.89
PSEN1-208ENST00000553719 CCDC194A0A1B0GVG4 234 aa20.59■□□□□ 0.89
PSEN1-208ENST00000553719 ASB14A6NK59 587 aa20.59■□□□□ 0.89
PSEN1-208ENST00000553719 NR3C2P08235 984 aa20.59■□□□□ 0.89
PSEN1-208ENST00000553719 UBXN2AP68543 259 aa20.59■□□□□ 0.89
PSEN1-208ENST00000553719 MRPS9P82933 396 aaKnown RBP20.59■□□□□ 0.89
PSEN1-208ENST00000553719 ARHGAP4P98171 946 aa20.59■□□□□ 0.89
PSEN1-208ENST00000553719 ARHGEF16Q5VV41 709 aa20.59■□□□□ 0.89
PSEN1-208ENST00000553719 ARMCX2Q7L311 632 aa20.59■□□□□ 0.89
PSEN1-208ENST00000553719 VSIG10LQ86VR7 867 aa20.59■□□□□ 0.89
PSEN1-208ENST00000553719 TBCKQ8TEA7 893 aa20.59■□□□□ 0.89
PSEN1-208ENST00000553719 TINF2Q9BSI4 451 aa20.59■□□□□ 0.89
PSEN1-208ENST00000553719 ZSCAN22P10073 491 aaPredicted RBP20.58■□□□□ 0.89
PSEN1-208ENST00000553719 INF2Q27J81 1249 aa20.58■□□□□ 0.89
PSEN1-208ENST00000553719 XRRA1Q6P2D8 792 aa20.58■□□□□ 0.89
PSEN1-208ENST00000553719 PXYLP1Q8TE99 480 aa20.58■□□□□ 0.89
PSEN1-208ENST00000553719 EHMT1Q9H9B1 1298 aa20.58■□□□□ 0.89
PSEN1-208ENST00000553719 PRDM10Q9NQV6 1147 aa20.58■□□□□ 0.89
PSEN1-208ENST00000553719 PTPN22Q9Y2R2 807 aa20.58■□□□□ 0.89
PSEN1-208ENST00000553719 MYH15Q9Y2K3 1946 aa20.58■□□□□ 0.88
PSEN1-208ENST00000553719 KIAA1217Q5T5P2 1943 aa20.57■□□□□ 0.88
PSEN1-208ENST00000553719 RGS20O76081 388 aa20.57■□□□□ 0.88
PSEN1-208ENST00000553719 SNAI1O95863 264 aaPredicted RBP20.57■□□□□ 0.88
PSEN1-208ENST00000553719 CIITAP33076 1130 aa20.57■□□□□ 0.88
PSEN1-208ENST00000553719 MCTP1Q6DN14 999 aa20.57■□□□□ 0.88
PSEN1-208ENST00000553719 BRAPQ7Z569 592 aa20.57■□□□□ 0.88
PSEN1-208ENST00000553719 CTU1Q7Z7A3 348 aaKnown RBP20.57■□□□□ 0.88
PSEN1-208ENST00000553719 FERMT3Q86UX7 667 aa20.57■□□□□ 0.88
PSEN1-208ENST00000553719 TRMT44Q8IYL2 757 aaKnown RBP20.57■□□□□ 0.88
PSEN1-208ENST00000553719 MBOAT7Q96N66 472 aa20.57■□□□□ 0.88
PSEN1-208ENST00000553719 DAXXQ9UER7 740 aaPredicted RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms