RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 KLHDC4Q8TBB5 520 aa6.94□□□□□ -1.3
SMARCE1P3-201ENST00000553649 SMCR8Q8TEV9 937 aaPredicted RBP6.94□□□□□ -1.3
SMARCE1P3-201ENST00000553649 NUDT8Q8WV74 236 aa6.94□□□□□ -1.3
SMARCE1P3-201ENST00000553649 HSH2DQ96JZ2 352 aa6.94□□□□□ -1.3
SMARCE1P3-201ENST00000553649 ZDHHC15Q96MV8 337 aa6.94□□□□□ -1.3
SMARCE1P3-201ENST00000553649 SRCIN1Q9C0H9 1055 aa6.94□□□□□ -1.3
SMARCE1P3-201ENST00000553649 BICC1Q9H694 974 aaKnown RBP6.94□□□□□ -1.3
SMARCE1P3-201ENST00000553649 BRD7Q9NPI1 651 aa6.94□□□□□ -1.3
SMARCE1P3-201ENST00000553649 RNF112Q9ULX5 631 aa6.94□□□□□ -1.3
SMARCE1P3-201ENST00000553649 IL16Q14005 1332 aa6.94□□□□□ -1.3
SMARCE1P3-201ENST00000553649 SPTBN4Q9H254 2564 aa6.94□□□□□ -1.3
SMARCE1P3-201ENST00000553649 C5orf42Q9H799 3197 aa6.94□□□□□ -1.3
SMARCE1P3-201ENST00000553649 DNM1LO00429 736 aa6.93□□□□□ -1.3
SMARCE1P3-201ENST00000553649 BACH1O14867 736 aa6.93□□□□□ -1.3
SMARCE1P3-201ENST00000553649 ALDH1L1O75891 902 aa6.93□□□□□ -1.3
SMARCE1P3-201ENST00000553649 NFIAQ12857 509 aa6.93□□□□□ -1.3
SMARCE1P3-201ENST00000553649 GADL1Q6ZQY3 521 aa6.93□□□□□ -1.3
SMARCE1P3-201ENST00000553649 ZNF280CQ8ND82 737 aa6.93□□□□□ -1.3
SMARCE1P3-201ENST00000553649 KAZALD1Q96I82 304 aa6.93□□□□□ -1.3
SMARCE1P3-201ENST00000553649 JPH1Q9HDC5 661 aaPredicted RBP6.93□□□□□ -1.3
SMARCE1P3-201ENST00000553649 NAGPAQ9UK23 515 aa6.93□□□□□ -1.3
SMARCE1P3-201ENST00000553649 SLC6A14Q9UN76 642 aa6.93□□□□□ -1.3
SMARCE1P3-201ENST00000553649 COG5Q9UP83 839 aa6.93□□□□□ -1.3
SMARCE1P3-201ENST00000553649 AFG3L2Q9Y4W6 797 aa6.93□□□□□ -1.3
SMARCE1P3-201ENST00000553649 GPC6Q9Y625 555 aaPredicted RBP6.93□□□□□ -1.3
SMARCE1P3-201ENST00000553649 MAST3O60307 1309 aa6.93□□□□□ -1.3
SMARCE1P3-201ENST00000553649 DCHS1Q96JQ0 3298 aa6.93□□□□□ -1.3
SMARCE1P3-201ENST00000553649 A0A1B0GUL6 1792 aa6.92□□□□□ -1.3
SMARCE1P3-201ENST00000553649 A6NJR5 290 aa6.92□□□□□ -1.3
SMARCE1P3-201ENST00000553649 PDE8BO95263 885 aa6.92□□□□□ -1.3
SMARCE1P3-201ENST00000553649 IFIT1P09914 478 aaKnown RBP6.92□□□□□ -1.3
SMARCE1P3-201ENST00000553649 RAC1P63000 192 aa6.92□□□□□ -1.3
SMARCE1P3-201ENST00000553649 FPGSQ05932 587 aa6.92□□□□□ -1.3
SMARCE1P3-201ENST00000553649 TYRO3Q06418 890 aa6.92□□□□□ -1.3
SMARCE1P3-201ENST00000553649 KCTD2Q14681 263 aa6.92□□□□□ -1.3
SMARCE1P3-201ENST00000553649 PUM3Q15397 648 aaKnown RBP6.92□□□□□ -1.3
SMARCE1P3-201ENST00000553649 CCL14Q16627 93 aa6.92□□□□□ -1.3
SMARCE1P3-201ENST00000553649 CDC42EP5Q6NZY7 148 aa6.92□□□□□ -1.3
SMARCE1P3-201ENST00000553649 CCDC129Q6ZRS4 1044 aa6.92□□□□□ -1.3
SMARCE1P3-201ENST00000553649 HFE2Q6ZVN8 426 aa6.92□□□□□ -1.3
SMARCE1P3-201ENST00000553649 C16orf59Q7L2K0 433 aa6.92□□□□□ -1.3
SMARCE1P3-201ENST00000553649 ZFPM1Q8IX07 1006 aa6.92□□□□□ -1.3
SMARCE1P3-201ENST00000553649 DMRTC2Q8IXT2 367 aaPredicted RBP6.92□□□□□ -1.3
SMARCE1P3-201ENST00000553649 GJD3Q8N144 294 aa6.92□□□□□ -1.3
SMARCE1P3-201ENST00000553649 FAM151AQ8WW52 585 aa6.92□□□□□ -1.3
SMARCE1P3-201ENST00000553649 USP6NLQ92738 828 aa6.92□□□□□ -1.3
SMARCE1P3-201ENST00000553649 BHMTQ93088 406 aa6.92□□□□□ -1.3
SMARCE1P3-201ENST00000553649 CEP63Q96MT8 703 aa6.92□□□□□ -1.3
SMARCE1P3-201ENST00000553649 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.92□□□□□ -1.3
SMARCE1P3-201ENST00000553649 NKX2-4Q9H2Z4 354 aa6.92□□□□□ -1.3
SMARCE1P3-201ENST00000553649 ALG2Q9H553 416 aa6.92□□□□□ -1.3
SMARCE1P3-201ENST00000553649 NEUROD4Q9HD90 331 aa6.92□□□□□ -1.3
SMARCE1P3-201ENST00000553649 PICK1Q9NRD5 415 aa6.92□□□□□ -1.3
SMARCE1P3-201ENST00000553649 USP40Q9NVE5 1235 aa6.92□□□□□ -1.3
SMARCE1P3-201ENST00000553649 ZNF232Q9UNY5 417 aa6.92□□□□□ -1.3
SMARCE1P3-201ENST00000553649 AGTPBP1Q9UPW5 1226 aa6.92□□□□□ -1.3
SMARCE1P3-201ENST00000553649 ZHX2Q9Y6X8 837 aa6.92□□□□□ -1.3
SMARCE1P3-201ENST00000553649 DOCK3Q8IZD9 2030 aa6.92□□□□□ -1.3
SMARCE1P3-201ENST00000553649 ZFHX2Q9C0A1 2572 aaPredicted RBP6.92□□□□□ -1.3
SMARCE1P3-201ENST00000553649 MED19A0JLT2 244 aaPredicted RBP6.91□□□□□ -1.3
SMARCE1P3-201ENST00000553649 TRIM75PA6NK02 468 aa6.91□□□□□ -1.3
SMARCE1P3-201ENST00000553649 SFI1A8K8P3 1242 aa6.91□□□□□ -1.3
SMARCE1P3-201ENST00000553649 KIAA0355O15063 1070 aa6.91□□□□□ -1.3
SMARCE1P3-201ENST00000553649 COBLO75128 1261 aa6.91□□□□□ -1.3
SMARCE1P3-201ENST00000553649 ALADP13716 330 aa6.91□□□□□ -1.3
SMARCE1P3-201ENST00000553649 SLC5A1P13866 664 aa6.91□□□□□ -1.3
SMARCE1P3-201ENST00000553649 ZKSCAN1P17029 563 aaPredicted RBP6.91□□□□□ -1.3
SMARCE1P3-201ENST00000553649 PTPRAP18433 802 aa6.91□□□□□ -1.3
SMARCE1P3-201ENST00000553649 POU3F3P20264 500 aaPredicted RBP6.91□□□□□ -1.3
SMARCE1P3-201ENST00000553649 GCLCP48506 637 aaPredicted RBP6.91□□□□□ -1.3
SMARCE1P3-201ENST00000553649 TLE2Q04725 743 aa6.91□□□□□ -1.3
SMARCE1P3-201ENST00000553649 TBC1D8BQ0IIM8 1120 aa6.91□□□□□ -1.3
SMARCE1P3-201ENST00000553649 TCF15Q12870 199 aa6.91□□□□□ -1.3
SMARCE1P3-201ENST00000553649 TREML2Q5T2D2 321 aa6.91□□□□□ -1.3
SMARCE1P3-201ENST00000553649 C1orf53Q5VUE5 145 aa6.91□□□□□ -1.3
SMARCE1P3-201ENST00000553649 HHIPL2Q6UWX4 724 aa6.91□□□□□ -1.3
SMARCE1P3-201ENST00000553649 WDR63Q8IWG1 891 aa6.91□□□□□ -1.3
SMARCE1P3-201ENST00000553649 ZSCAN29Q8IWY8 852 aaPredicted RBP6.91□□□□□ -1.3
SMARCE1P3-201ENST00000553649 FAM178BQ8IXR5 827 aa6.91□□□□□ -1.3
SMARCE1P3-201ENST00000553649 SCYL3Q8IZE3 742 aa6.91□□□□□ -1.3
SMARCE1P3-201ENST00000553649 ANKRD44Q8N8A2 993 aa6.91□□□□□ -1.3
SMARCE1P3-201ENST00000553649 VGLL2Q8N8G2 317 aa6.91□□□□□ -1.3
SMARCE1P3-201ENST00000553649 WDR66Q8TBY9 1149 aa6.91□□□□□ -1.3
SMARCE1P3-201ENST00000553649 RHPN1Q8TCX5 695 aa6.91□□□□□ -1.3
SMARCE1P3-201ENST00000553649 WFDC12Q8WWY7 111 aa6.91□□□□□ -1.3
SMARCE1P3-201ENST00000553649 SOCS4Q8WXH5 440 aa6.91□□□□□ -1.3
SMARCE1P3-201ENST00000553649 LPAR1Q92633 364 aa6.91□□□□□ -1.3
SMARCE1P3-201ENST00000553649 MRS2Q9HD23 443 aa6.91□□□□□ -1.3
SMARCE1P3-201ENST00000553649 MORF4L1Q9UBU8 362 aa6.91□□□□□ -1.3
SMARCE1P3-201ENST00000553649 DDX20Q9UHI6 824 aaKnown RBP6.91□□□□□ -1.3
SMARCE1P3-201ENST00000553649 YBX2Q9Y2T7 364 aaKnown RBP6.91□□□□□ -1.3
SMARCE1P3-201ENST00000553649 MTCH2Q9Y6C9 303 aa6.91□□□□□ -1.3
SMARCE1P3-201ENST00000553649 AK9Q5TCS8 1911 aa6.91□□□□□ -1.3
SMARCE1P3-201ENST00000553649 PLXNB2O15031 1838 aa6.9□□□□□ -1.3
SMARCE1P3-201ENST00000553649 SERTM1A2A2V5 107 aa6.9□□□□□ -1.3
SMARCE1P3-201ENST00000553649 POM121CA8CG34 1229 aa6.9□□□□□ -1.3
SMARCE1P3-201ENST00000553649 IGHA2P01877 340 aa6.9□□□□□ -1.3
SMARCE1P3-201ENST00000553649 LDHBP07195 334 aaKnown RBP6.9□□□□□ -1.3
SMARCE1P3-201ENST00000553649 NOS3P29474 1203 aa6.9□□□□□ -1.3
SMARCE1P3-201ENST00000553649 PRDX5P30044 214 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms