RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 TACC3Q9Y6A5 838 aa8.83□□□□□ -1
ATXN3-219ENST00000553488 BRWD1Q9NSI6 2320 aa8.83□□□□□ -1
ATXN3-219ENST00000553488 PQBP1O60828 265 aaKnown RBP8.82□□□□□ -1
ATXN3-219ENST00000553488 SURF6O75683 361 aaKnown RBP8.82□□□□□ -1
ATXN3-219ENST00000553488 PGK1P00558 417 aa8.82□□□□□ -1
ATXN3-219ENST00000553488 ZNF865P0CJ78 1059 aaPredicted RBP8.82□□□□□ -1
ATXN3-219ENST00000553488 RARBP10826 455 aa8.82□□□□□ -1
ATXN3-219ENST00000553488 TAL1P17542 331 aaPredicted RBP8.82□□□□□ -1
ATXN3-219ENST00000553488 ATP8B2P98198 1209 aa8.82□□□□□ -1
ATXN3-219ENST00000553488 FPGSQ05932 587 aa8.82□□□□□ -1
ATXN3-219ENST00000553488 FAAP100Q0VG06 881 aa8.82□□□□□ -1
ATXN3-219ENST00000553488 SEMA3FQ13275 785 aa8.82□□□□□ -1
ATXN3-219ENST00000553488 CLN3Q13286 438 aa8.82□□□□□ -1
ATXN3-219ENST00000553488 OS9Q13438 667 aaPredicted RBP8.82□□□□□ -1
ATXN3-219ENST00000553488 TMEM132BQ14DG7 1078 aa8.82□□□□□ -1
ATXN3-219ENST00000553488 SLFNL1Q499Z3 407 aa8.82□□□□□ -1
ATXN3-219ENST00000553488 RASIP1Q5U651 963 aa8.82□□□□□ -1
ATXN3-219ENST00000553488 ANKRD33Q7Z3H0 272 aa8.82□□□□□ -1
ATXN3-219ENST00000553488 NCAPG2Q86XI2 1143 aa8.82□□□□□ -1
ATXN3-219ENST00000553488 RNF135Q8IUD6 432 aa8.82□□□□□ -1
ATXN3-219ENST00000553488 TMEM57Q8N5G2 664 aa8.82□□□□□ -1
ATXN3-219ENST00000553488 SLC44A5Q8NCS7 719 aa8.82□□□□□ -1
ATXN3-219ENST00000553488 ADAMTS19Q8TE59 1207 aa8.82□□□□□ -1
ATXN3-219ENST00000553488 CLUAP1Q96AJ1 413 aa8.82□□□□□ -1
ATXN3-219ENST00000553488 CCDC8Q9H0W5 538 aaPredicted RBP8.82□□□□□ -1
ATXN3-219ENST00000553488 POLMQ9NP87 494 aaPredicted RBP8.82□□□□□ -1
ATXN3-219ENST00000553488 SLC5A4Q9NY91 659 aa8.82□□□□□ -1
ATXN3-219ENST00000553488 TBX21Q9UL17 535 aa8.82□□□□□ -1
ATXN3-219ENST00000553488 ADAMTS5Q9UNA0 930 aa8.82□□□□□ -1
ATXN3-219ENST00000553488 HRH3Q9Y5N1 445 aa8.82□□□□□ -1
ATXN3-219ENST00000553488 LCTP09848 1927 aa8.82□□□□□ -1
ATXN3-219ENST00000553488 SYNRGQ9UMZ2 1314 aa8.81□□□□□ -1
ATXN3-219ENST00000553488 PRRC2BQ5JSZ5 2229 aaKnown RBP8.81□□□□□ -1
ATXN3-219ENST00000553488 PIEZO1Q92508 2521 aa8.81□□□□□ -1
ATXN3-219ENST00000553488 WDR46O15213 610 aaKnown RBP8.81□□□□□ -1
ATXN3-219ENST00000553488 RAD21O60216 631 aa8.81□□□□□ -1
ATXN3-219ENST00000553488 BCAR3O75815 825 aa8.81□□□□□ -1
ATXN3-219ENST00000553488 FLOT1O75955 427 aa8.81□□□□□ -1
ATXN3-219ENST00000553488 PGK2P07205 417 aa8.81□□□□□ -1
ATXN3-219ENST00000553488 CYP2D6P10635 497 aa8.81□□□□□ -1
ATXN3-219ENST00000553488 AKR1B1P15121 316 aa8.81□□□□□ -1
ATXN3-219ENST00000553488 RAG1P15918 1043 aa8.81□□□□□ -1
ATXN3-219ENST00000553488 MAP3K12Q12852 859 aa8.81□□□□□ -1
ATXN3-219ENST00000553488 PLS1Q14651 629 aa8.81□□□□□ -1
ATXN3-219ENST00000553488 ZNF792Q3KQV3 632 aa8.81□□□□□ -1
ATXN3-219ENST00000553488 CCSAPQ6IQ19 270 aaPredicted RBP8.81□□□□□ -1
ATXN3-219ENST00000553488 TMEM179Q6ZVK1 233 aa8.81□□□□□ -1
ATXN3-219ENST00000553488 RNF180Q86T96 592 aa8.81□□□□□ -1
ATXN3-219ENST00000553488 SPICE1Q8N0Z3 855 aa8.81□□□□□ -1
ATXN3-219ENST00000553488 REPS2Q8NFH8 660 aa8.81□□□□□ -1
ATXN3-219ENST00000553488 TOX2Q96NM4 488 aa8.81□□□□□ -1
ATXN3-219ENST00000553488 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.81□□□□□ -1
ATXN3-219ENST00000553488 TINF2Q9BSI4 451 aa8.81□□□□□ -1
ATXN3-219ENST00000553488 ZNF576Q9H609 170 aa8.81□□□□□ -1
ATXN3-219ENST00000553488 C1orf115Q9H7X2 142 aa8.81□□□□□ -1
ATXN3-219ENST00000553488 VCPKMTQ9H867 229 aa8.81□□□□□ -1
ATXN3-219ENST00000553488 RAPGEFL1Q9UHV5 662 aa8.81□□□□□ -1
ATXN3-219ENST00000553488 ZNF214Q9UL59 606 aaPredicted RBP8.81□□□□□ -1
ATXN3-219ENST00000553488 TMX2Q9Y320 296 aa8.81□□□□□ -1
ATXN3-219ENST00000553488 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.8□□□□□ -1
ATXN3-219ENST00000553488 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.8□□□□□ -1
ATXN3-219ENST00000553488 TCRBV5S4A2TA0A5A2 114 aa8.8□□□□□ -1
ATXN3-219ENST00000553488 POM121CA8CG34 1229 aa8.8□□□□□ -1
ATXN3-219ENST00000553488 SMIM22K7EJ46 135 aa8.8□□□□□ -1
ATXN3-219ENST00000553488 MPHOSPH10O00566 681 aaKnown RBP8.8□□□□□ -1
ATXN3-219ENST00000553488 IPO8O15397 1037 aaKnown RBP8.8□□□□□ -1
ATXN3-219ENST00000553488 SLC25A27O95847 323 aa8.8□□□□□ -1
ATXN3-219ENST00000553488 POLR3DP05423 398 aaPredicted RBP8.8□□□□□ -1
ATXN3-219ENST00000553488 FCER1AP12319 257 aa8.8□□□□□ -1
ATXN3-219ENST00000553488 AKR1A1P14550 325 aa8.8□□□□□ -1
ATXN3-219ENST00000553488 PDE6AP16499 860 aa8.8□□□□□ -1
ATXN3-219ENST00000553488 ICA1Q05084 483 aa8.8□□□□□ -1
ATXN3-219ENST00000553488 MAP7D1Q3KQU3 841 aa8.8□□□□□ -1
ATXN3-219ENST00000553488 C16orf59Q7L2K0 433 aa8.8□□□□□ -1
ATXN3-219ENST00000553488 RIOX2Q8IUF8 465 aa8.8□□□□□ -1
ATXN3-219ENST00000553488 LCORLQ8N3X6 602 aa8.8□□□□□ -1
ATXN3-219ENST00000553488 KLHDC9Q8NEP7 349 aa8.8□□□□□ -1
ATXN3-219ENST00000553488 SDR42E1Q8WUS8 393 aa8.8□□□□□ -1
ATXN3-219ENST00000553488 IRF7Q92985 503 aa8.8□□□□□ -1
ATXN3-219ENST00000553488 TIFAQ96CG3 184 aa8.8□□□□□ -1
ATXN3-219ENST00000553488 DYNLL2Q96FJ2 89 aa8.8□□□□□ -1
ATXN3-219ENST00000553488 MMP19Q99542 508 aa8.8□□□□□ -1
ATXN3-219ENST00000553488 PBX4Q9BYU1 374 aa8.8□□□□□ -1
ATXN3-219ENST00000553488 GRIP2Q9C0E4 1043 aa8.8□□□□□ -1
ATXN3-219ENST00000553488 DCP1AQ9NPI6 582 aaPredicted RBP8.8□□□□□ -1
ATXN3-219ENST00000553488 TMEM39AQ9NV64 488 aa8.8□□□□□ -1
ATXN3-219ENST00000553488 FBXO28Q9NVF7 368 aa8.8□□□□□ -1
ATXN3-219ENST00000553488 MCM9Q9NXL9 1143 aa8.8□□□□□ -1
ATXN3-219ENST00000553488 DOLKQ9UPQ8 538 aa8.8□□□□□ -1
ATXN3-219ENST00000553488 DIS3Q9Y2L1 958 aaKnown RBP8.8□□□□□ -1
ATXN3-219ENST00000553488 MYADML2A6NDP7 307 aa8.79□□□□□ -1
ATXN3-219ENST00000553488 PIK3CDO00329 1044 aa8.79□□□□□ -1
ATXN3-219ENST00000553488 ADCY6O43306 1168 aa8.79□□□□□ -1
ATXN3-219ENST00000553488 TIMP1P01033 207 aa8.79□□□□□ -1
ATXN3-219ENST00000553488 CST5P28325 142 aaPredicted RBP8.79□□□□□ -1
ATXN3-219ENST00000553488 ACLYP53396 1101 aa8.79□□□□□ -1
ATXN3-219ENST00000553488 USP4Q13107 963 aa8.79□□□□□ -1
ATXN3-219ENST00000553488 ADGRE1Q14246 886 aa8.79□□□□□ -1
ATXN3-219ENST00000553488 TMEM240Q5SV17 173 aa8.79□□□□□ -1
ATXN3-219ENST00000553488 AKNAD1Q5T1N1 836 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms