RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 TAOK3Q9H2K8 898 aa14.44□□□□□ -0.1
SHMT2-205ENST00000553474 HAUS4Q9H6D7 363 aa14.44□□□□□ -0.1
SHMT2-205ENST00000553474 RIC8AQ9NPQ8 531 aa14.44□□□□□ -0.1
SHMT2-205ENST00000553474 LZTFL1Q9NQ48 299 aa14.44□□□□□ -0.1
SHMT2-205ENST00000553474 A0A1W2PQJ5 194 aa14.43□□□□□ -0.1
SHMT2-205ENST00000553474 HLA-DOAP06340 250 aa14.43□□□□□ -0.1
SHMT2-205ENST00000553474 ERVK-24P63145 666 aa14.43□□□□□ -0.1
SHMT2-205ENST00000553474 ASIC1P78348 528 aa14.43□□□□□ -0.1
SHMT2-205ENST00000553474 KRT83P78385 493 aa14.43□□□□□ -0.1
SHMT2-205ENST00000553474 CDK17Q00537 523 aa14.43□□□□□ -0.1
SHMT2-205ENST00000553474 ZNF543Q08ER8 600 aa14.43□□□□□ -0.1
SHMT2-205ENST00000553474 MEA1Q16626 185 aa14.43□□□□□ -0.1
SHMT2-205ENST00000553474 CCDC170Q8IYT3 715 aa14.43□□□□□ -0.1
SHMT2-205ENST00000553474 LRRN4CLQ8ND94 238 aa14.43□□□□□ -0.1
SHMT2-205ENST00000553474 TUBGCP2Q9BSJ2 902 aa14.43□□□□□ -0.1
SHMT2-205ENST00000553474 ZMYND15Q9H091 742 aa14.43□□□□□ -0.1
SHMT2-205ENST00000553474 ZNF277Q9NRM2 450 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-205ENST00000553474 ZNF446Q9NWS9 450 aa14.43□□□□□ -0.1
SHMT2-205ENST00000553474 LRWD1Q9UFC0 647 aa14.43□□□□□ -0.1
SHMT2-205ENST00000553474 MTMR7Q9Y216 660 aa14.43□□□□□ -0.1
SHMT2-205ENST00000553474 EPN1Q9Y6I3 576 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-205ENST00000553474 TRIM49BA6NDI0 452 aa14.42□□□□□ -0.1
SHMT2-205ENST00000553474 NFKBIEO00221 500 aa14.42□□□□□ -0.1
SHMT2-205ENST00000553474 NDUFA10O95299 355 aa14.42□□□□□ -0.1
SHMT2-205ENST00000553474 TECP42680 631 aa14.42□□□□□ -0.1
SHMT2-205ENST00000553474 MRPL12P52815 198 aaKnown RBP14.42□□□□□ -0.1
SHMT2-205ENST00000553474 AOC3Q16853 763 aa14.42□□□□□ -0.1
SHMT2-205ENST00000553474 WHAMMP3Q1A5X7 153 aa14.42□□□□□ -0.1
SHMT2-205ENST00000553474 CENPPQ6IPU0 288 aa14.42□□□□□ -0.1
SHMT2-205ENST00000553474 UNC13DQ70J99 1090 aa14.42□□□□□ -0.1
SHMT2-205ENST00000553474 CDK5RAP3Q96JB5 506 aa14.42□□□□□ -0.1
SHMT2-205ENST00000553474 ERGIC2Q96RQ1 377 aa14.42□□□□□ -0.1
SHMT2-205ENST00000553474 NAPGQ99747 312 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-205ENST00000553474 MMTAG2Q9BU76 263 aaKnown RBP14.42□□□□□ -0.1
SHMT2-205ENST00000553474 ZNHIT6Q9NWK9 470 aaKnown RBP14.42□□□□□ -0.1
SHMT2-205ENST00000553474 MAPK8IP1Q9UQF2 711 aa14.42□□□□□ -0.1
SHMT2-205ENST00000553474 UTRNP46939 3433 aa14.42□□□□□ -0.1
SHMT2-205ENST00000553474 DICER1Q9UPY3 1922 aaKnown RBP14.42□□□□□ -0.1
SHMT2-205ENST00000553474 TTC26A0AVF1 554 aa14.42□□□□□ -0.1
SHMT2-205ENST00000553474 CCDC151A5D8V7 595 aa14.42□□□□□ -0.1
SHMT2-205ENST00000553474 PPIP5K2O43314 1243 aa14.42□□□□□ -0.1
SHMT2-205ENST00000553474 KIF20AO95235 890 aa14.42□□□□□ -0.1
SHMT2-205ENST00000553474 CLK2P49760 499 aaKnown RBP14.42□□□□□ -0.1
SHMT2-205ENST00000553474 PMS1P54277 932 aaKnown RBP14.42□□□□□ -0.1
SHMT2-205ENST00000553474 FKBP1AP62942 108 aaKnown RBP14.42□□□□□ -0.1
SHMT2-205ENST00000553474 LRRC63Q05C16 580 aa14.42□□□□□ -0.1
SHMT2-205ENST00000553474 KRT79Q5XKE5 535 aa14.42□□□□□ -0.1
SHMT2-205ENST00000553474 POTEDQ86YR6 584 aa14.42□□□□□ -0.1
SHMT2-205ENST00000553474 GUF1Q8N442 669 aaKnown RBP14.42□□□□□ -0.1
SHMT2-205ENST00000553474 SUPT20HQ8NEM7 779 aa14.42□□□□□ -0.1
SHMT2-205ENST00000553474 LARP4BQ92615 738 aaKnown RBP14.42□□□□□ -0.1
SHMT2-205ENST00000553474 CUL5Q93034 780 aa14.42□□□□□ -0.1
SHMT2-205ENST00000553474 TEKT1Q969V4 418 aa14.42□□□□□ -0.1
SHMT2-205ENST00000553474 MTMR8Q96EF0 704 aa14.42□□□□□ -0.1
SHMT2-205ENST00000553474 DUSP9Q99956 384 aaKnown RBP14.42□□□□□ -0.1
SHMT2-205ENST00000553474 DHX36Q9H2U1 1008 aaKnown RBP14.42□□□□□ -0.1
SHMT2-205ENST00000553474 BIN2Q9UBW5 565 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-205ENST00000553474 G3V3G9 751 aa14.41□□□□□ -0.1
SHMT2-205ENST00000553474 NPM3O75607 178 aaKnown RBP14.41□□□□□ -0.1
SHMT2-205ENST00000553474 PNMA6AP0CW24 399 aaPredicted RBP14.41□□□□□ -0.1
SHMT2-205ENST00000553474 CYLC1P35663 651 aaPredicted RBP14.41□□□□□ -0.1
SHMT2-205ENST00000553474 CHMP4BP1P59074 171 aa14.41□□□□□ -0.1
SHMT2-205ENST00000553474 ZBED6P86452 979 aa14.41□□□□□ -0.1
SHMT2-205ENST00000553474 BRD3Q15059 726 aa14.41□□□□□ -0.1
SHMT2-205ENST00000553474 KIF4BQ2VIQ3 1234 aa14.41□□□□□ -0.1
SHMT2-205ENST00000553474 GRIPAP1Q4V328 841 aa14.41□□□□□ -0.1
SHMT2-205ENST00000553474 ZNF569Q5MCW4 686 aa14.41□□□□□ -0.1
SHMT2-205ENST00000553474 FKBP15Q5T1M5 1219 aa14.41□□□□□ -0.1
SHMT2-205ENST00000553474 DCAF8Q5TAQ9 597 aa14.41□□□□□ -0.1
SHMT2-205ENST00000553474 PSMD1Q99460 953 aa14.41□□□□□ -0.1
SHMT2-205ENST00000553474 TTYH3Q9C0H2 523 aa14.41□□□□□ -0.1
SHMT2-205ENST00000553474 UBA5Q9GZZ9 404 aa14.41□□□□□ -0.1
SHMT2-205ENST00000553474 VAT1LQ9HCJ6 419 aa14.41□□□□□ -0.1
SHMT2-205ENST00000553474 FHOD1Q9Y613 1164 aa14.41□□□□□ -0.1
SHMT2-205ENST00000553474 KDM3AQ9Y4C1 1321 aa14.4□□□□□ -0.1
SHMT2-205ENST00000553474 ZBTB5O15062 677 aa14.4□□□□□ -0.1
SHMT2-205ENST00000553474 IPO7O95373 1038 aaKnown RBP14.4□□□□□ -0.1
SHMT2-205ENST00000553474 AKR1B1P15121 316 aa14.4□□□□□ -0.1
SHMT2-205ENST00000553474 TRIM21P19474 475 aaKnown RBP14.4□□□□□ -0.1
SHMT2-205ENST00000553474 TXKP42681 527 aa14.4□□□□□ -0.1
SHMT2-205ENST00000553474 HDLBPQ00341 1268 aaKnown RBP14.4□□□□□ -0.1
SHMT2-205ENST00000553474 STK4Q13043 487 aa14.4□□□□□ -0.1
SHMT2-205ENST00000553474 GRB10Q13322 594 aa14.4□□□□□ -0.1
SHMT2-205ENST00000553474 DOK7Q18PE1 504 aa14.4□□□□□ -0.1
SHMT2-205ENST00000553474 PODNQ7Z5L7 613 aa14.4□□□□□ -0.1
SHMT2-205ENST00000553474 CCDC84Q86UT8 332 aaPredicted RBP14.4□□□□□ -0.1
SHMT2-205ENST00000553474 TEX2Q8IWB9 1127 aa14.4□□□□□ -0.1
SHMT2-205ENST00000553474 LRRC15Q8TF66 581 aa14.4□□□□□ -0.1
SHMT2-205ENST00000553474 HNRNPLLQ8WVV9 542 aaKnown RBP14.4□□□□□ -0.1
SHMT2-205ENST00000553474 CNOT6LQ96LI5 555 aaKnown RBP14.4□□□□□ -0.1
SHMT2-205ENST00000553474 NT5C3AQ9H0P0 336 aa14.4□□□□□ -0.1
SHMT2-205ENST00000553474 CPVLQ9H3G5 476 aa14.4□□□□□ -0.1
SHMT2-205ENST00000553474 DBNDD1Q9H9R9 158 aa14.4□□□□□ -0.1
SHMT2-205ENST00000553474 JMJD4Q9H9V9 463 aa14.4□□□□□ -0.1
SHMT2-205ENST00000553474 ARFGAP3Q9NP61 516 aa14.4□□□□□ -0.1
SHMT2-205ENST00000553474 COL4A5P29400 1685 aa14.4□□□□□ -0.1
SHMT2-205ENST00000553474 SCN9AQ15858 1988 aa14.4□□□□□ -0.1
SHMT2-205ENST00000553474 MYH7BA7E2Y1 1941 aa14.4□□□□□ -0.1
SHMT2-205ENST00000553474 ARHGAP25P42331 645 aa14.39□□□□□ -0.11
SHMT2-205ENST00000553474 TBC1D8BQ0IIM8 1120 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms