RNA–Protein interactions for RNA: ENST00000552627.1

SMARCC2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 409 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-213ENST00000552627 PSMD1Q99460 953 aa6.95□□□□□ -1.3
SMARCC2-213ENST00000552627 CEP44Q9C0F1 390 aa6.95□□□□□ -1.3
SMARCC2-213ENST00000552627 TMX4Q9H1E5 349 aaPredicted RBP6.95□□□□□ -1.3
SMARCC2-213ENST00000552627 CCDC86Q9H6F5 360 aaKnown RBP6.95□□□□□ -1.3
SMARCC2-213ENST00000552627 NMRK2Q9NPI5 230 aa6.95□□□□□ -1.3
SMARCC2-213ENST00000552627 FAM8A1Q9UBU6 413 aa6.95□□□□□ -1.3
SMARCC2-213ENST00000552627 POLLQ9UGP5 575 aa6.95□□□□□ -1.3
SMARCC2-213ENST00000552627 PPM1HQ9ULR3 514 aa6.95□□□□□ -1.3
SMARCC2-213ENST00000552627 LRRFIP2Q9Y608 721 aaKnown RBP6.95□□□□□ -1.3
SMARCC2-213ENST00000552627 ACTL7BQ9Y614 415 aa6.95□□□□□ -1.3
SMARCC2-213ENST00000552627 SYNGAP1Q96PV0 1343 aa6.95□□□□□ -1.3
SMARCC2-213ENST00000552627 SNAP23O00161 211 aa6.94□□□□□ -1.3
SMARCC2-213ENST00000552627 UFL1O94874 794 aa6.94□□□□□ -1.3
SMARCC2-213ENST00000552627 SLFN14P0C7P3 912 aa6.94□□□□□ -1.3
SMARCC2-213ENST00000552627 UBTFL1P0CB47 393 aaPredicted RBP6.94□□□□□ -1.3
SMARCC2-213ENST00000552627 LIG1P18858 919 aa6.94□□□□□ -1.3
SMARCC2-213ENST00000552627 NME2P22392 152 aa6.94□□□□□ -1.3
SMARCC2-213ENST00000552627 KLRK1P26718 216 aa6.94□□□□□ -1.3
SMARCC2-213ENST00000552627 ARNTP27540 789 aa6.94□□□□□ -1.3
SMARCC2-213ENST00000552627 IGHMBP2P38935 993 aaKnown RBP6.94□□□□□ -1.3
SMARCC2-213ENST00000552627 IFIT5Q13325 482 aaKnown RBP6.94□□□□□ -1.3
SMARCC2-213ENST00000552627 NFKBIBQ15653 356 aa6.94□□□□□ -1.3
SMARCC2-213ENST00000552627 ARTNQ5T4W7 220 aa6.94□□□□□ -1.3
SMARCC2-213ENST00000552627 C20orf194Q5TEA3 1177 aa6.94□□□□□ -1.3
SMARCC2-213ENST00000552627 PAOXQ6QHF9 649 aa6.94□□□□□ -1.3
SMARCC2-213ENST00000552627 PDZD3Q86UT5 571 aa6.94□□□□□ -1.3
SMARCC2-213ENST00000552627 ITPRIPQ8IWB1 547 aa6.94□□□□□ -1.3
SMARCC2-213ENST00000552627 FTSJ3Q8IY81 847 aaKnown RBP6.94□□□□□ -1.3
SMARCC2-213ENST00000552627 TBC1D16Q8TBP0 767 aa6.94□□□□□ -1.3
SMARCC2-213ENST00000552627 KCNB2Q92953 911 aa6.94□□□□□ -1.3
SMARCC2-213ENST00000552627 NECAB3Q96P71 396 aaPredicted RBP6.94□□□□□ -1.3
SMARCC2-213ENST00000552627 WDR18Q9BV38 432 aa6.94□□□□□ -1.3
SMARCC2-213ENST00000552627 EMILIN2Q9BXX0 1053 aa6.94□□□□□ -1.3
SMARCC2-213ENST00000552627 PUS3Q9BZE2 481 aaKnown RBP6.94□□□□□ -1.3
SMARCC2-213ENST00000552627 KRT82Q9NSB4 513 aa6.94□□□□□ -1.3
SMARCC2-213ENST00000552627 MINPP1Q9UNW1 487 aa6.94□□□□□ -1.3
SMARCC2-213ENST00000552627 AP4E1Q9UPM8 1137 aa6.94□□□□□ -1.3
SMARCC2-213ENST00000552627 SCN9AQ15858 1988 aa6.93□□□□□ -1.3
SMARCC2-213ENST00000552627 ZNF646O15015 1829 aaPredicted RBP6.93□□□□□ -1.3
SMARCC2-213ENST00000552627 TAF5LO75529 589 aa6.93□□□□□ -1.3
SMARCC2-213ENST00000552627 DDNO94850 711 aaPredicted RBP6.93□□□□□ -1.3
SMARCC2-213ENST00000552627 USP17L7P0C7H9 530 aa6.93□□□□□ -1.3
SMARCC2-213ENST00000552627 GNA15P30679 374 aa6.93□□□□□ -1.3
SMARCC2-213ENST00000552627 ASPAP45381 313 aa6.93□□□□□ -1.3
SMARCC2-213ENST00000552627 LRP8Q14114 963 aa6.93□□□□□ -1.3
SMARCC2-213ENST00000552627 CCDC57Q2TAC2 916 aa6.93□□□□□ -1.3
SMARCC2-213ENST00000552627 RABL6Q3YEC7 729 aaPredicted RBP6.93□□□□□ -1.3
SMARCC2-213ENST00000552627 TAF7LQ5H9L4 462 aa6.93□□□□□ -1.3
SMARCC2-213ENST00000552627 DNAJC14Q6Y2X3 702 aaPredicted RBP6.93□□□□□ -1.3
SMARCC2-213ENST00000552627 TMC4Q7Z404 712 aa6.93□□□□□ -1.3
SMARCC2-213ENST00000552627 STK35Q8TDR2 534 aa6.93□□□□□ -1.3
SMARCC2-213ENST00000552627 WDR89Q96FK6 387 aaPredicted RBP6.93□□□□□ -1.3
SMARCC2-213ENST00000552627 MPHOSPH8Q99549 860 aa6.93□□□□□ -1.3
SMARCC2-213ENST00000552627 RTFDC1Q9BY42 306 aaPredicted RBP6.93□□□□□ -1.3
SMARCC2-213ENST00000552627 DBNDD1Q9H9R9 158 aa6.93□□□□□ -1.3
SMARCC2-213ENST00000552627 CNNM1Q9NRU3 951 aa6.93□□□□□ -1.3
SMARCC2-213ENST00000552627 BSDC1Q9NW68 430 aaPredicted RBP6.93□□□□□ -1.3
SMARCC2-213ENST00000552627 SAMM50Q9Y512 469 aa6.93□□□□□ -1.3
SMARCC2-213ENST00000552627 XDHP47989 1333 aa6.93□□□□□ -1.3
SMARCC2-213ENST00000552627 WDR90Q96KV7 1748 aa6.93□□□□□ -1.3
SMARCC2-213ENST00000552627 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.92□□□□□ -1.3
SMARCC2-213ENST00000552627 YDJCA8MPS7 323 aa6.92□□□□□ -1.3
SMARCC2-213ENST00000552627 ZNF862O60290 1169 aa6.92□□□□□ -1.3
SMARCC2-213ENST00000552627 FBXO24O75426 580 aa6.92□□□□□ -1.3
SMARCC2-213ENST00000552627 RAD17O75943 681 aa6.92□□□□□ -1.3
SMARCC2-213ENST00000552627 RAB6AP20340 208 aa6.92□□□□□ -1.3
SMARCC2-213ENST00000552627 EIF4BP23588 611 aaKnown RBP6.92□□□□□ -1.3
SMARCC2-213ENST00000552627 RFX5P48382 616 aaPredicted RBP6.92□□□□□ -1.3
SMARCC2-213ENST00000552627 CHRNDQ07001 517 aa6.92□□□□□ -1.3
SMARCC2-213ENST00000552627 KIAA2012Q0VF49 1180 aa6.92□□□□□ -1.3
SMARCC2-213ENST00000552627 LRRC24Q50LG9 513 aa6.92□□□□□ -1.3
SMARCC2-213ENST00000552627 LDHAL6AQ6ZMR3 332 aa6.92□□□□□ -1.3
SMARCC2-213ENST00000552627 ZDHHC13Q8IUH4 622 aa6.92□□□□□ -1.3
SMARCC2-213ENST00000552627 NIM1KQ8IY84 436 aa6.92□□□□□ -1.3
SMARCC2-213ENST00000552627 SUPT20HQ8NEM7 779 aa6.92□□□□□ -1.3
SMARCC2-213ENST00000552627 JDP2Q8WYK2 163 aa6.92□□□□□ -1.3
SMARCC2-213ENST00000552627 EZH1Q92800 747 aaPredicted RBP6.92□□□□□ -1.3
SMARCC2-213ENST00000552627 MFSD14AQ96MC6 490 aa6.92□□□□□ -1.3
SMARCC2-213ENST00000552627 DUSP9Q99956 384 aaKnown RBP6.92□□□□□ -1.3
SMARCC2-213ENST00000552627 SIL1Q9H173 461 aa6.92□□□□□ -1.3
SMARCC2-213ENST00000552627 GSX1Q9H4S2 264 aaPredicted RBP6.92□□□□□ -1.3
SMARCC2-213ENST00000552627 CBX8Q9HC52 389 aa6.92□□□□□ -1.3
SMARCC2-213ENST00000552627 ZFP64Q9NPA5 681 aa6.92□□□□□ -1.3
SMARCC2-213ENST00000552627 KCNQ5Q9NR82 932 aa6.92□□□□□ -1.3
SMARCC2-213ENST00000552627 FAM105AQ9NUU6 356 aa6.92□□□□□ -1.3
SMARCC2-213ENST00000552627 PODXL2Q9NZ53 605 aa6.92□□□□□ -1.3
SMARCC2-213ENST00000552627 PPP1R9AQ9ULJ8 1098 aa6.92□□□□□ -1.3
SMARCC2-213ENST00000552627 PA2G4Q9UQ80 394 aaKnown RBP6.92□□□□□ -1.3
SMARCC2-213ENST00000552627 KDM2BQ8NHM5 1336 aa6.92□□□□□ -1.3
SMARCC2-213ENST00000552627 PSME4Q14997 1843 aa6.92□□□□□ -1.3
SMARCC2-213ENST00000552627 GLTPD2A6NH11 291 aa6.91□□□□□ -1.3
SMARCC2-213ENST00000552627 FZD9O00144 591 aa6.91□□□□□ -1.3
SMARCC2-213ENST00000552627 ENC1O14682 589 aa6.91□□□□□ -1.3
SMARCC2-213ENST00000552627 HYAL3O43820 417 aaPredicted RBP6.91□□□□□ -1.3
SMARCC2-213ENST00000552627 ECE2O60344 883 aa6.91□□□□□ -1.3
SMARCC2-213ENST00000552627 TGFB1P01137 390 aa6.91□□□□□ -1.3
SMARCC2-213ENST00000552627 NFICP08651 508 aa6.91□□□□□ -1.3
SMARCC2-213ENST00000552627 GNAI3P08754 354 aa6.91□□□□□ -1.3
SMARCC2-213ENST00000552627 KCNJ4P48050 445 aa6.91□□□□□ -1.3
SMARCC2-213ENST00000552627 ID3Q02535 119 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms