RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 ANAPC4Q9UJX5 808 aa19.94■□□□□ 0.78
CACNB3-222ENST00000552465 BDP1A6H8Y1 2624 aa19.94■□□□□ 0.78
CACNB3-222ENST00000552465 ORC4O43929 436 aa19.93■□□□□ 0.78
CACNB3-222ENST00000552465 LPXNO60711 386 aa19.93■□□□□ 0.78
CACNB3-222ENST00000552465 FGRP09769 529 aa19.93■□□□□ 0.78
CACNB3-222ENST00000552465 EDNRBP24530 442 aa19.93■□□□□ 0.78
CACNB3-222ENST00000552465 GPCPD1Q9NPB8 672 aa19.93■□□□□ 0.78
CACNB3-222ENST00000552465 PNMA2Q9UL42 364 aa19.93■□□□□ 0.78
CACNB3-222ENST00000552465 LCTP09848 1927 aa19.93■□□□□ 0.78
CACNB3-222ENST00000552465 TXNP10599 105 aaKnown RBP19.92■□□□□ 0.78
CACNB3-222ENST00000552465 TOP1P11387 765 aaKnown RBP19.92■□□□□ 0.78
CACNB3-222ENST00000552465 RPS6P62753 249 aaKnown RBP19.92■□□□□ 0.78
CACNB3-222ENST00000552465 TMEM31Q5JXX7 168 aa19.92■□□□□ 0.78
CACNB3-222ENST00000552465 SPRED2Q7Z698 418 aa19.92■□□□□ 0.78
CACNB3-222ENST00000552465 MPHOSPH6Q99547 160 aaKnown RBP19.92■□□□□ 0.78
CACNB3-222ENST00000552465 TMEM47Q9BQJ4 181 aa19.92■□□□□ 0.78
CACNB3-222ENST00000552465 NOD1Q9Y239 953 aa19.92■□□□□ 0.78
CACNB3-222ENST00000552465 FRMPD2Q68DX3 1309 aaPredicted RBP19.92■□□□□ 0.78
CACNB3-222ENST00000552465 KCNJ6P48051 423 aa19.91■□□□□ 0.78
CACNB3-222ENST00000552465 PTGISQ16647 500 aa19.91■□□□□ 0.78
CACNB3-222ENST00000552465 DNERQ8NFT8 737 aa19.91■□□□□ 0.78
CACNB3-222ENST00000552465 OTUD7AQ8TE49 926 aaPredicted RBP19.91■□□□□ 0.78
CACNB3-222ENST00000552465 HCN4Q9Y3Q4 1203 aa19.91■□□□□ 0.78
CACNB3-222ENST00000552465 SCN5AQ14524 2016 aa19.91■□□□□ 0.78
CACNB3-222ENST00000552465 GPNMBQ14956 572 aa19.9■□□□□ 0.78
CACNB3-222ENST00000552465 VPS53Q5VIR6 699 aa19.9■□□□□ 0.78
CACNB3-222ENST00000552465 CTAGE1Q96RT6 745 aa19.9■□□□□ 0.78
CACNB3-222ENST00000552465 TCP11L1Q9NUJ3 509 aa19.9■□□□□ 0.78
CACNB3-222ENST00000552465 SCN10AQ9Y5Y9 1956 aa19.9■□□□□ 0.78
CACNB3-222ENST00000552465 LCHNA4D1U4 455 aa19.89■□□□□ 0.77
CACNB3-222ENST00000552465 B4DLN1 442 aa19.89■□□□□ 0.77
CACNB3-222ENST00000552465 ARIH2O95376 493 aa19.89■□□□□ 0.77
CACNB3-222ENST00000552465 MRPL12P52815 198 aaKnown RBP19.89■□□□□ 0.77
CACNB3-222ENST00000552465 CHMP4BP1P59074 171 aa19.89■□□□□ 0.77
CACNB3-222ENST00000552465 WDR5P61964 334 aaKnown RBP19.89■□□□□ 0.77
CACNB3-222ENST00000552465 ALX1Q15699 326 aa19.89■□□□□ 0.77
CACNB3-222ENST00000552465 CCDC155Q8N6L0 562 aa19.89■□□□□ 0.77
CACNB3-222ENST00000552465 CAGE1Q8TC20 777 aa19.89■□□□□ 0.77
CACNB3-222ENST00000552465 AFAP1L1Q8TED9 768 aa19.89■□□□□ 0.77
CACNB3-222ENST00000552465 KHSRPQ92945 711 aaKnown RBP eCLIP19.89■□□□□ 0.77
CACNB3-222ENST00000552465 TOMM22Q9NS69 142 aa19.89■□□□□ 0.77
CACNB3-222ENST00000552465 LMCD1Q9NZU5 365 aa19.89■□□□□ 0.77
CACNB3-222ENST00000552465 WDR19Q8NEZ3 1342 aa19.88■□□□□ 0.77
CACNB3-222ENST00000552465 GPR37L1O60883 481 aa19.88■□□□□ 0.77
CACNB3-222ENST00000552465 PDHBP11177 359 aa19.88■□□□□ 0.77
CACNB3-222ENST00000552465 CCDC62Q6P9F0 684 aa19.88■□□□□ 0.77
CACNB3-222ENST00000552465 TMCO2Q7Z6W1 182 aaPredicted RBP19.88■□□□□ 0.77
CACNB3-222ENST00000552465 SESTD1Q86VW0 696 aa19.88■□□□□ 0.77
CACNB3-222ENST00000552465 ZBED2Q9BTP6 218 aa19.88■□□□□ 0.77
CACNB3-222ENST00000552465 C11orf16Q9NQ32 467 aa19.88■□□□□ 0.77
CACNB3-222ENST00000552465 SELPP16109 830 aa19.87■□□□□ 0.77
CACNB3-222ENST00000552465 ZNF543Q08ER8 600 aa19.87■□□□□ 0.77
CACNB3-222ENST00000552465 RRP12Q5JTH9 1297 aaKnown RBP19.87■□□□□ 0.77
CACNB3-222ENST00000552465 GDF6Q6KF10 455 aaPredicted RBP19.87■□□□□ 0.77
CACNB3-222ENST00000552465 RGS22Q8NE09 1264 aa19.87■□□□□ 0.77
CACNB3-222ENST00000552465 AFG1LQ8WV93 481 aa19.87■□□□□ 0.77
CACNB3-222ENST00000552465 MMP3P08254 477 aa19.86■□□□□ 0.77
CACNB3-222ENST00000552465 MX1P20591 662 aa19.86■□□□□ 0.77
CACNB3-222ENST00000552465 DEFB103AP81534 67 aa19.86■□□□□ 0.77
CACNB3-222ENST00000552465 LRRC8DQ7L1W4 858 aa19.86■□□□□ 0.77
CACNB3-222ENST00000552465 GDPD5Q8WTR4 605 aa19.86■□□□□ 0.77
CACNB3-222ENST00000552465 DHX38Q92620 1227 aaKnown RBP19.86■□□□□ 0.77
CACNB3-222ENST00000552465 KAT2BQ92831 832 aa19.86■□□□□ 0.77
CACNB3-222ENST00000552465 CD320Q9NPF0 282 aa19.86■□□□□ 0.77
CACNB3-222ENST00000552465 PI4K2BG5E9Z4 385 aa19.85■□□□□ 0.77
CACNB3-222ENST00000552465 PARNO95453 639 aaKnown RBP19.85■□□□□ 0.77
CACNB3-222ENST00000552465 FGAP02671 866 aa19.85■□□□□ 0.77
CACNB3-222ENST00000552465 CXCL10P02778 98 aa19.85■□□□□ 0.77
CACNB3-222ENST00000552465 SNHG28P0DPA3 235 aa19.85■□□□□ 0.77
CACNB3-222ENST00000552465 RBL2Q08999 1139 aa19.85■□□□□ 0.77
CACNB3-222ENST00000552465 CNKSR3Q6P9H4 555 aa19.85■□□□□ 0.77
CACNB3-222ENST00000552465 TTC14Q96N46 770 aa19.85■□□□□ 0.77
CACNB3-222ENST00000552465 RAD9AQ99638 391 aa19.85■□□□□ 0.77
CACNB3-222ENST00000552465 SUGCTQ9HAC7 445 aa19.85■□□□□ 0.77
CACNB3-222ENST00000552465 HELLSQ9NRZ9 838 aa19.85■□□□□ 0.77
CACNB3-222ENST00000552465 ABHD14A-ACY1A0A1B0GW23 586 aa19.84■□□□□ 0.77
CACNB3-222ENST00000552465 NBNO60934 754 aa19.84■□□□□ 0.77
CACNB3-222ENST00000552465 GJB5O95377 273 aa19.84■□□□□ 0.77
CACNB3-222ENST00000552465 GH1P01241 217 aa19.84■□□□□ 0.77
CACNB3-222ENST00000552465 CASTP20810 708 aaKnown RBP19.84■□□□□ 0.77
CACNB3-222ENST00000552465 ERVK-21P61565 698 aa19.84■□□□□ 0.77
CACNB3-222ENST00000552465 ARHGAP1Q07960 439 aa19.84■□□□□ 0.77
CACNB3-222ENST00000552465 LY6KQ17RY6 165 aa19.84■□□□□ 0.77
CACNB3-222ENST00000552465 TCTN1Q2MV58 587 aa19.84■□□□□ 0.77
CACNB3-222ENST00000552465 SEPT14Q6ZU15 432 aa19.84■□□□□ 0.77
CACNB3-222ENST00000552465 REV3LO60673 3130 aa19.84■□□□□ 0.77
CACNB3-222ENST00000552465 TET1Q8NFU7 2136 aa19.84■□□□□ 0.77
CACNB3-222ENST00000552465 XIRP2A4UGR9 3374 aa19.83■□□□□ 0.77
CACNB3-222ENST00000552465 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.83■□□□□ 0.77
CACNB3-222ENST00000552465 FAM86C2PA6NEL3 165 aa19.83■□□□□ 0.77
CACNB3-222ENST00000552465 CKBP12277 381 aa19.83■□□□□ 0.77
CACNB3-222ENST00000552465 USH1GQ495M9 461 aa19.83■□□□□ 0.77
CACNB3-222ENST00000552465 TBC1D5Q92609 795 aa19.83■□□□□ 0.77
CACNB3-222ENST00000552465 EVI5LQ96CN4 794 aa19.83■□□□□ 0.77
CACNB3-222ENST00000552465 TAAR1Q96RJ0 339 aa19.83■□□□□ 0.77
CACNB3-222ENST00000552465 TGS1Q96RS0 853 aaKnown RBP19.83■□□□□ 0.77
CACNB3-222ENST00000552465 MAF1Q9H063 256 aa19.83■□□□□ 0.77
CACNB3-222ENST00000552465 GTF2IRD1Q9UHL9 959 aa19.83■□□□□ 0.77
CACNB3-222ENST00000552465 MTUS1Q9ULD2 1270 aa19.83■□□□□ 0.77
CACNB3-222ENST00000552465 TANC1Q9C0D5 1861 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms