RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 LRRC41Q15345 812 aa21.29■■□□□ 1
PRPF40B-216ENST00000552301 DPF3Q92784 378 aa21.29■■□□□ 1
PRPF40B-216ENST00000552301 GPKOWQ92917 476 aaPredicted RBP eCLIP21.29■■□□□ 1
PRPF40B-216ENST00000552301 PXMP2Q9NR77 195 aa21.29■■□□□ 1
PRPF40B-216ENST00000552301 SYNRGQ9UMZ2 1314 aa21.29■■□□□ 1
PRPF40B-216ENST00000552301 BRCA2P51587 3418 aa21.28■■□□□ 1
PRPF40B-216ENST00000552301 hCG_1984214I3L0E3 225 aa21.28■■□□□ 1
PRPF40B-216ENST00000552301 CPLX1O14810 134 aa21.28■■□□□ 1
PRPF40B-216ENST00000552301 MNX1P50219 401 aaPredicted RBP21.28■■□□□ 1
PRPF40B-216ENST00000552301 NAPAP54920 295 aa21.28■■□□□ 1
PRPF40B-216ENST00000552301 FUT2Q10981 343 aa21.28■■□□□ 1
PRPF40B-216ENST00000552301 STXBP2Q15833 593 aa21.28■■□□□ 1
PRPF40B-216ENST00000552301 IQSEC1Q6DN90 963 aa21.28■■□□□ 1
PRPF40B-216ENST00000552301 CPLX2Q6PUV4 134 aaKnown RBP21.28■■□□□ 1
PRPF40B-216ENST00000552301 ZNF713Q8N859 430 aaPredicted RBP21.28■■□□□ 1
PRPF40B-216ENST00000552301 UPF2Q9HAU5 1272 aaKnown RBP21.28■■□□□ 1
PRPF40B-216ENST00000552301 PDGFCQ9NRA1 345 aa21.28■■□□□ 1
PRPF40B-216ENST00000552301 C6orf222P0C671 652 aaPredicted RBP21.27■■□□□ 1
PRPF40B-216ENST00000552301 WWC2Q6AWC2 1192 aa21.27■■□□□ 1
PRPF40B-216ENST00000552301 TAPT1Q6NXT6 567 aa21.27■■□□□ 1
PRPF40B-216ENST00000552301 PPP1R18Q6NYC8 613 aa21.27■■□□□ 1
PRPF40B-216ENST00000552301 TLK2Q86UE8 772 aa21.27■■□□□ 1
PRPF40B-216ENST00000552301 SCFD2Q8WU76 684 aa21.27■■□□□ 1
PRPF40B-216ENST00000552301 ZNF274Q96GC6 653 aaPredicted RBP21.27■■□□□ 1
PRPF40B-216ENST00000552301 LARP6Q9BRS8 491 aaKnown RBP21.27■■□□□ 1
PRPF40B-216ENST00000552301 SENP6Q9GZR1 1112 aaPredicted RBP21.27■■□□□ 1
PRPF40B-216ENST00000552301 AP5M1Q9H0R1 490 aa21.27■■□□□ 1
PRPF40B-216ENST00000552301 PSTPIP2Q9H939 334 aa21.27■■□□□ 1
PRPF40B-216ENST00000552301 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.26■□□□□ 0.99
PRPF40B-216ENST00000552301 ADAMTS4O75173 837 aa21.26■□□□□ 0.99
PRPF40B-216ENST00000552301 NR3C2P08235 984 aa21.26■□□□□ 0.99
PRPF40B-216ENST00000552301 MYCLP12524 364 aaPredicted RBP21.26■□□□□ 0.99
PRPF40B-216ENST00000552301 STK3Q13188 491 aa21.26■□□□□ 0.99
PRPF40B-216ENST00000552301 IL17RAQ96F46 866 aa21.26■□□□□ 0.99
PRPF40B-216ENST00000552301 PDCD2LQ9BRP1 358 aa21.26■□□□□ 0.99
PRPF40B-216ENST00000552301 WDR11Q9BZH6 1224 aa21.26■□□□□ 0.99
PRPF40B-216ENST00000552301 NCOA5Q9HCD5 579 aaKnown RBP21.26■□□□□ 0.99
PRPF40B-216ENST00000552301 ADCY6O43306 1168 aa21.25■□□□□ 0.99
PRPF40B-216ENST00000552301 COL6A1P12109 1028 aa21.25■□□□□ 0.99
PRPF40B-216ENST00000552301 SMPD1P17405 629 aa21.25■□□□□ 0.99
PRPF40B-216ENST00000552301 CCND2P30279 289 aa21.25■□□□□ 0.99
PRPF40B-216ENST00000552301 TTLL4Q14679 1199 aa21.25■□□□□ 0.99
PRPF40B-216ENST00000552301 USP17L6PQ6QN14 398 aa21.25■□□□□ 0.99
PRPF40B-216ENST00000552301 SEPT14Q6ZU15 432 aa21.25■□□□□ 0.99
PRPF40B-216ENST00000552301 TRIM22Q8IYM9 498 aa21.25■□□□□ 0.99
PRPF40B-216ENST00000552301 PCSK9Q8NBP7 692 aaKnown RBP21.25■□□□□ 0.99
PRPF40B-216ENST00000552301 SLC26A6Q9BXS9 759 aa21.25■□□□□ 0.99
PRPF40B-216ENST00000552301 UPF3AQ9H1J1 476 aaKnown RBP21.25■□□□□ 0.99
PRPF40B-216ENST00000552301 PIK3CDO00329 1044 aa21.24■□□□□ 0.99
PRPF40B-216ENST00000552301 EVI5O60447 810 aa21.24■□□□□ 0.99
PRPF40B-216ENST00000552301 SCG2P13521 617 aa21.24■□□□□ 0.99
PRPF40B-216ENST00000552301 IFNAR1P17181 557 aa21.24■□□□□ 0.99
PRPF40B-216ENST00000552301 NEK4P51957 841 aa21.24■□□□□ 0.99
PRPF40B-216ENST00000552301 AK2P54819 239 aa21.24■□□□□ 0.99
PRPF40B-216ENST00000552301 GJA9P57773 515 aa21.24■□□□□ 0.99
PRPF40B-216ENST00000552301 PFKFB3Q16875 520 aaPredicted RBP21.24■□□□□ 0.99
PRPF40B-216ENST00000552301 DUSP28Q4G0W2 176 aa21.24■□□□□ 0.99
PRPF40B-216ENST00000552301 CCDC12Q8WUD4 166 aaPredicted RBP21.24■□□□□ 0.99
PRPF40B-216ENST00000552301 PHKBQ93100 1093 aa21.24■□□□□ 0.99
PRPF40B-216ENST00000552301 TSEN34Q9BSV6 310 aaKnown RBP21.24■□□□□ 0.99
PRPF40B-216ENST00000552301 RNF26Q9BY78 433 aaPredicted RBP21.24■□□□□ 0.99
PRPF40B-216ENST00000552301 C22orf23Q9BZE7 217 aa21.24■□□□□ 0.99
PRPF40B-216ENST00000552301 ALDH8A1Q9H2A2 487 aaPredicted RBP21.24■□□□□ 0.99
PRPF40B-216ENST00000552301 SLKQ9H2G2 1235 aaPredicted RBP21.24■□□□□ 0.99
PRPF40B-216ENST00000552301 GNEQ9Y223 722 aaKnown RBP21.24■□□□□ 0.99
PRPF40B-216ENST00000552301 NR2E3Q9Y5X4 410 aa21.24■□□□□ 0.99
PRPF40B-216ENST00000552301 RBM47A0AV96 593 aaKnown RBP21.23■□□□□ 0.99
PRPF40B-216ENST00000552301 SPDYE3A6NKU9 549 aa21.23■□□□□ 0.99
PRPF40B-216ENST00000552301 NKRFO15226 690 aaKnown RBP eCLIP21.23■□□□□ 0.99
PRPF40B-216ENST00000552301 DYNC1LI2O43237 492 aaPredicted RBP21.23■□□□□ 0.99
PRPF40B-216ENST00000552301 PRPF3O43395 683 aaKnown RBP21.23■□□□□ 0.99
PRPF40B-216ENST00000552301 EIF3JO75822 258 aaKnown RBP21.23■□□□□ 0.99
PRPF40B-216ENST00000552301 CST5P28325 142 aaPredicted RBP21.23■□□□□ 0.99
PRPF40B-216ENST00000552301 ADCY7P51828 1080 aa21.23■□□□□ 0.99
PRPF40B-216ENST00000552301 PGM5Q15124 567 aa21.23■□□□□ 0.99
PRPF40B-216ENST00000552301 GNASQ5JWF2 1037 aa21.23■□□□□ 0.99
PRPF40B-216ENST00000552301 FERMT2Q96AC1 680 aa21.23■□□□□ 0.99
PRPF40B-216ENST00000552301 GLT8D2Q9H1C3 349 aa21.23■□□□□ 0.99
PRPF40B-216ENST00000552301 EHMT1Q9H9B1 1298 aa21.23■□□□□ 0.99
PRPF40B-216ENST00000552301 BARHL2Q9NY43 387 aa21.23■□□□□ 0.99
PRPF40B-216ENST00000552301 PHF24Q9UPV7 400 aa21.23■□□□□ 0.99
PRPF40B-216ENST00000552301 Q9Y3F1 56 aa21.23■□□□□ 0.99
PRPF40B-216ENST00000552301 MOXD2PA6NHM9 499 aa21.22■□□□□ 0.99
PRPF40B-216ENST00000552301 STXBP3O00186 592 aa21.22■□□□□ 0.99
PRPF40B-216ENST00000552301 MEIS2O14770 477 aa21.22■□□□□ 0.99
PRPF40B-216ENST00000552301 ZEB2O60315 1214 aa21.22■□□□□ 0.99
PRPF40B-216ENST00000552301 CDKL5O76039 1030 aa21.22■□□□□ 0.99
PRPF40B-216ENST00000552301 SLC34A2O95436 690 aa21.22■□□□□ 0.99
PRPF40B-216ENST00000552301 TXNP10599 105 aaKnown RBP21.22■□□□□ 0.99
PRPF40B-216ENST00000552301 ATN1P54259 1190 aaPredicted RBP21.22■□□□□ 0.99
PRPF40B-216ENST00000552301 FSCN1Q16658 493 aaKnown RBP21.22■□□□□ 0.99
PRPF40B-216ENST00000552301 TEX2Q8IWB9 1127 aa21.22■□□□□ 0.99
PRPF40B-216ENST00000552301 KLHDC9Q8NEP7 349 aa21.22■□□□□ 0.99
PRPF40B-216ENST00000552301 OR6J1Q8NGC5 347 aa21.22■□□□□ 0.99
PRPF40B-216ENST00000552301 MRVI1Q9Y6F6 885 aa21.22■□□□□ 0.99
PRPF40B-216ENST00000552301 MYADML2A6NDP7 307 aa21.21■□□□□ 0.99
PRPF40B-216ENST00000552301 PPFIA3O75145 1194 aa21.21■□□□□ 0.99
PRPF40B-216ENST00000552301 SSRP1Q08945 709 aaKnown RBP21.21■□□□□ 0.99
PRPF40B-216ENST00000552301 NTRK3Q16288 839 aa21.21■□□□□ 0.99
PRPF40B-216ENST00000552301 KCNA10Q16322 511 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms