RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 GULP1Q9UBP9 304 aa6.27□□□□□ -1.41
USP44-207ENST00000552237 LAMTOR5O43504 91 aa6.26□□□□□ -1.41
USP44-207ENST00000552237 IMPDH2P12268 514 aa6.26□□□□□ -1.41
USP44-207ENST00000552237 SEPHS1P49903 392 aa6.26□□□□□ -1.41
USP44-207ENST00000552237 RBM10P98175 930 aaKnown RBP6.26□□□□□ -1.41
USP44-207ENST00000552237 TTLL6Q8N841 843 aa6.26□□□□□ -1.41
USP44-207ENST00000552237 KYQ8NBH2 561 aa6.26□□□□□ -1.41
USP44-207ENST00000552237 LCORQ96JN0 433 aaPredicted RBP6.26□□□□□ -1.41
USP44-207ENST00000552237 KLC2Q9H0B6 622 aa6.26□□□□□ -1.41
USP44-207ENST00000552237 FBLN5Q9UBX5 448 aa6.26□□□□□ -1.41
USP44-207ENST00000552237 STXBP3O00186 592 aa6.25□□□□□ -1.41
USP44-207ENST00000552237 C9orf131Q5VYM1 1079 aa6.25□□□□□ -1.41
USP44-207ENST00000552237 CD300LDQ6UXZ3 194 aa6.25□□□□□ -1.41
USP44-207ENST00000552237 ZC3H18Q86VM9 953 aaKnown RBP6.25□□□□□ -1.41
USP44-207ENST00000552237 SLITRK4Q8IW52 837 aa6.25□□□□□ -1.41
USP44-207ENST00000552237 PALM2Q8IXS6 379 aa6.25□□□□□ -1.41
USP44-207ENST00000552237 TXNDC5Q8NBS9 432 aaKnown RBP6.25□□□□□ -1.41
USP44-207ENST00000552237 FERD3LQ96RJ6 166 aa6.25□□□□□ -1.41
USP44-207ENST00000552237 TM9SF2Q99805 663 aa6.25□□□□□ -1.41
USP44-207ENST00000552237 NT5C1AQ9BXI3 368 aa6.25□□□□□ -1.41
USP44-207ENST00000552237 DEF6Q9H4E7 631 aa6.25□□□□□ -1.41
USP44-207ENST00000552237 DIS3Q9Y2L1 958 aaKnown RBP6.25□□□□□ -1.41
USP44-207ENST00000552237 NPEPPSL1A6NEC2 478 aa6.24□□□□□ -1.41
USP44-207ENST00000552237 FBXW10Q5XX13 1052 aa6.24□□□□□ -1.41
USP44-207ENST00000552237 CPNE8Q86YQ8 564 aa6.24□□□□□ -1.41
USP44-207ENST00000552237 DCP2Q8IU60 420 aaKnown RBP6.24□□□□□ -1.41
USP44-207ENST00000552237 TAB3Q8N5C8 712 aaPredicted RBP6.24□□□□□ -1.41
USP44-207ENST00000552237 ADCY4Q8NFM4 1077 aa6.24□□□□□ -1.41
USP44-207ENST00000552237 ZNF747Q9BV97 191 aa6.24□□□□□ -1.41
USP44-207ENST00000552237 SSBP3Q9BWW4 388 aaPredicted RBP6.24□□□□□ -1.41
USP44-207ENST00000552237 AP5M1Q9H0R1 490 aa6.24□□□□□ -1.41
USP44-207ENST00000552237 ZNRF3Q9ULT6 936 aa6.24□□□□□ -1.41
USP44-207ENST00000552237 SIT1Q9Y3P8 196 aa6.24□□□□□ -1.41
USP44-207ENST00000552237 TRBV23OR9-2A0A075B6M9 112 aa6.23□□□□□ -1.41
USP44-207ENST00000552237 A0A087WZG4 1122 aa6.23□□□□□ -1.41
USP44-207ENST00000552237 DDX3XO00571 662 aaKnown RBP eCLIP6.23□□□□□ -1.41
USP44-207ENST00000552237 AURKAO14965 403 aa6.23□□□□□ -1.41
USP44-207ENST00000552237 AMHP03971 560 aa6.23□□□□□ -1.41
USP44-207ENST00000552237 FUCA1P04066 466 aa6.23□□□□□ -1.41
USP44-207ENST00000552237 NTRK1P04629 796 aa6.23□□□□□ -1.41
USP44-207ENST00000552237 CYP1A1P04798 512 aaPredicted RBP6.23□□□□□ -1.41
USP44-207ENST00000552237 MFAP1P55081 439 aaKnown RBP6.23□□□□□ -1.41
USP44-207ENST00000552237 TAGLNQ01995 201 aaKnown RBP6.23□□□□□ -1.41
USP44-207ENST00000552237 DPY19L1Q2PZI1 675 aa6.23□□□□□ -1.41
USP44-207ENST00000552237 PRAMEF18Q5VWM3 479 aa6.23□□□□□ -1.41
USP44-207ENST00000552237 ZNF585AQ6P3V2 769 aa6.23□□□□□ -1.41
USP44-207ENST00000552237 STK32CQ86UX6 486 aa6.23□□□□□ -1.41
USP44-207ENST00000552237 KIAA0825Q8IV33 1275 aa6.23□□□□□ -1.41
USP44-207ENST00000552237 MTA3Q9BTC8 594 aa6.23□□□□□ -1.41
USP44-207ENST00000552237 JADE2Q9NQC1 790 aa6.23□□□□□ -1.41
USP44-207ENST00000552237 BACE2Q9Y5Z0 518 aa6.23□□□□□ -1.41
USP44-207ENST00000552237 HS3ST3A1Q9Y663 406 aa6.23□□□□□ -1.41
USP44-207ENST00000552237 NPHP3-ACAD11A0A0J9YXS1 232 aa6.22□□□□□ -1.41
USP44-207ENST00000552237 NPHS1O60500 1241 aa6.22□□□□□ -1.41
USP44-207ENST00000552237 PAMP19021 973 aa6.22□□□□□ -1.41
USP44-207ENST00000552237 ERCC3P19447 782 aa6.22□□□□□ -1.41
USP44-207ENST00000552237 ICAM4Q14773 271 aa6.22□□□□□ -1.41
USP44-207ENST00000552237 CDSNQ15517 529 aa6.22□□□□□ -1.41
USP44-207ENST00000552237 CIR1Q86X95 450 aaPredicted RBP6.22□□□□□ -1.41
USP44-207ENST00000552237 SYT3Q9BQG1 590 aa6.22□□□□□ -1.41
USP44-207ENST00000552237 GBP3Q9H0R5 595 aa6.22□□□□□ -1.41
USP44-207ENST00000552237 PCED1AQ9H1Q7 454 aa6.22□□□□□ -1.41
USP44-207ENST00000552237 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.22□□□□□ -1.41
USP44-207ENST00000552237 WHRNQ9P202 907 aa6.22□□□□□ -1.41
USP44-207ENST00000552237 C2orf71A6NGG8 1288 aa6.21□□□□□ -1.42
USP44-207ENST00000552237 UNC5AQ6ZN44 842 aa6.21□□□□□ -1.42
USP44-207ENST00000552237 ADAT2Q7Z6V5 191 aaKnown RBP6.21□□□□□ -1.42
USP44-207ENST00000552237 SPON2Q9BUD6 331 aa6.21□□□□□ -1.42
USP44-207ENST00000552237 PPP4R1LQ9P1A2 415 aa6.21□□□□□ -1.42
USP44-207ENST00000552237 TCAF1Q9Y4C2 921 aa6.21□□□□□ -1.42
USP44-207ENST00000552237 C9orf118A6NHY6 69 aa6.2□□□□□ -1.42
USP44-207ENST00000552237 VAMP4O75379 141 aa6.2□□□□□ -1.42
USP44-207ENST00000552237 GUCY2CP25092 1073 aa6.2□□□□□ -1.42
USP44-207ENST00000552237 ZYXQ15942 572 aaKnown RBP6.2□□□□□ -1.42
USP44-207ENST00000552237 FAM26EQ8N5C1 309 aa6.2□□□□□ -1.42
USP44-207ENST00000552237 HAUS7Q99871 368 aa6.2□□□□□ -1.42
USP44-207ENST00000552237 YIPF4Q9BSR8 244 aa6.2□□□□□ -1.42
USP44-207ENST00000552237 MCMBPQ9BTE3 642 aa6.2□□□□□ -1.42
USP44-207ENST00000552237 BCL11AQ9H165 835 aa6.2□□□□□ -1.42
USP44-207ENST00000552237 B4GALT3O60512 393 aa6.19□□□□□ -1.42
USP44-207ENST00000552237 PPP1R11O60927 126 aaPredicted RBP6.19□□□□□ -1.42
USP44-207ENST00000552237 ITGA1P56199 1179 aa6.19□□□□□ -1.42
USP44-207ENST00000552237 AMPD2Q01433 879 aa6.19□□□□□ -1.42
USP44-207ENST00000552237 HEATR6Q6AI08 1181 aaKnown RBP6.19□□□□□ -1.42
USP44-207ENST00000552237 BCL2L13Q9BXK5 485 aa6.19□□□□□ -1.42
USP44-207ENST00000552237 L2HGDHQ9H9P8 463 aa6.19□□□□□ -1.42
USP44-207ENST00000552237 ZNF214Q9UL59 606 aaPredicted RBP6.19□□□□□ -1.42
USP44-207ENST00000552237 C7orf72A4D263 438 aa6.18□□□□□ -1.42
USP44-207ENST00000552237 MUSKO15146 869 aa6.18□□□□□ -1.42
USP44-207ENST00000552237 CBFA2T2O43439 604 aa6.18□□□□□ -1.42
USP44-207ENST00000552237 PPM1BO75688 479 aa6.18□□□□□ -1.42
USP44-207ENST00000552237 SELENOPP49908 381 aa6.18□□□□□ -1.42
USP44-207ENST00000552237 KLF10Q13118 480 aa6.18□□□□□ -1.42
USP44-207ENST00000552237 ARHGEF18Q6ZSZ5 1173 aa6.18□□□□□ -1.42
USP44-207ENST00000552237 MIB1Q86YT6 1006 aa6.18□□□□□ -1.42
USP44-207ENST00000552237 ZNF341Q9BYN7 854 aa6.18□□□□□ -1.42
USP44-207ENST00000552237 TMEM168Q9H0V1 697 aa6.18□□□□□ -1.42
USP44-207ENST00000552237 BTG4Q9NY30 223 aa6.18□□□□□ -1.42
USP44-207ENST00000552237 MARCH2Q9P0N8 246 aa6.18□□□□□ -1.42
USP44-207ENST00000552237 GNPTABQ3T906 1256 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms