RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 RFXAPO00287 272 aa6.53□□□□□ -1.36
HOXB3-213ENST00000552000 GPR37L1O60883 481 aa6.53□□□□□ -1.36
HOXB3-213ENST00000552000 FGBP02675 491 aa6.53□□□□□ -1.36
HOXB3-213ENST00000552000 CYP2E1P05181 493 aaPredicted RBP6.53□□□□□ -1.36
HOXB3-213ENST00000552000 ZAP70P43403 619 aa6.53□□□□□ -1.36
HOXB3-213ENST00000552000 CDK7P50613 346 aa6.53□□□□□ -1.36
HOXB3-213ENST00000552000 PLCD1P51178 756 aa6.53□□□□□ -1.36
HOXB3-213ENST00000552000 G3BP1Q13283 466 aaKnown RBP eCLIP6.53□□□□□ -1.36
HOXB3-213ENST00000552000 KCTD2Q14681 263 aa6.53□□□□□ -1.36
HOXB3-213ENST00000552000 ZNF792Q3KQV3 632 aa6.53□□□□□ -1.36
HOXB3-213ENST00000552000 KRT40Q6A162 431 aa6.53□□□□□ -1.36
HOXB3-213ENST00000552000 CCSAPQ6IQ19 270 aaPredicted RBP6.53□□□□□ -1.36
HOXB3-213ENST00000552000 OTOP2Q7RTS6 562 aa6.53□□□□□ -1.36
HOXB3-213ENST00000552000 TTC6Q86TZ1 520 aa6.53□□□□□ -1.36
HOXB3-213ENST00000552000 SPICE1Q8N0Z3 855 aa6.53□□□□□ -1.36
HOXB3-213ENST00000552000 NANOS1Q8WY41 292 aaKnown RBP6.53□□□□□ -1.36
HOXB3-213ENST00000552000 GLT1D1Q96MS3 346 aa6.53□□□□□ -1.36
HOXB3-213ENST00000552000 MTIF3Q9H2K0 278 aaKnown RBP6.53□□□□□ -1.36
HOXB3-213ENST00000552000 ZHX1Q9UKY1 873 aaPredicted RBP6.53□□□□□ -1.36
HOXB3-213ENST00000552000 ELP1O95163 1332 aa6.52□□□□□ -1.37
HOXB3-213ENST00000552000 UMODL1Q5DID0 1318 aa6.52□□□□□ -1.37
HOXB3-213ENST00000552000 BAZ2AQ9UIF9 1905 aaKnown RBP6.52□□□□□ -1.37
HOXB3-213ENST00000552000 NCOR2Q9Y618 2525 aa6.52□□□□□ -1.37
HOXB3-213ENST00000552000 NAV1Q8NEY1 1877 aa6.52□□□□□ -1.37
HOXB3-213ENST00000552000 CDC14CA4D256 554 aa6.52□□□□□ -1.37
HOXB3-213ENST00000552000 ZBBXA8MT70 800 aa6.52□□□□□ -1.37
HOXB3-213ENST00000552000 TLR3O15455 904 aaKnown RBP6.52□□□□□ -1.37
HOXB3-213ENST00000552000 IDH1O75874 414 aaKnown RBP6.52□□□□□ -1.37
HOXB3-213ENST00000552000 SLC25A27O95847 323 aa6.52□□□□□ -1.37
HOXB3-213ENST00000552000 POLR3DP05423 398 aaPredicted RBP6.52□□□□□ -1.37
HOXB3-213ENST00000552000 C6orf222P0C671 652 aaPredicted RBP6.52□□□□□ -1.37
HOXB3-213ENST00000552000 NDUFV2P19404 249 aa6.52□□□□□ -1.37
HOXB3-213ENST00000552000 CCL23P55773 120 aa6.52□□□□□ -1.37
HOXB3-213ENST00000552000 TMEM132BQ14DG7 1078 aa6.52□□□□□ -1.37
HOXB3-213ENST00000552000 CCDC158Q5M9N0 1113 aa6.52□□□□□ -1.37
HOXB3-213ENST00000552000 BPHLQ86WA6 291 aaPredicted RBP6.52□□□□□ -1.37
HOXB3-213ENST00000552000 CLEC10AQ8IUN9 316 aa6.52□□□□□ -1.37
HOXB3-213ENST00000552000 FAM126BQ8IXS8 530 aa6.52□□□□□ -1.37
HOXB3-213ENST00000552000 PCSK9Q8NBP7 692 aaKnown RBP6.52□□□□□ -1.37
HOXB3-213ENST00000552000 SPIRE2Q8WWL2 714 aa6.52□□□□□ -1.37
HOXB3-213ENST00000552000 SNX27Q96L92 541 aa6.52□□□□□ -1.37
HOXB3-213ENST00000552000 DBNDD2Q9BQY9 259 aa6.52□□□□□ -1.37
HOXB3-213ENST00000552000 KRTAP4-8Q9BYQ9 185 aa6.52□□□□□ -1.37
HOXB3-213ENST00000552000 CERS4Q9HA82 394 aa6.52□□□□□ -1.37
HOXB3-213ENST00000552000 FBXO28Q9NVF7 368 aa6.52□□□□□ -1.37
HOXB3-213ENST00000552000 FAM184BQ9ULE4 1060 aa6.52□□□□□ -1.37
HOXB3-213ENST00000552000 MTCH2Q9Y6C9 303 aa6.52□□□□□ -1.37
HOXB3-213ENST00000552000 SLC4A7Q9Y6M7 1214 aa6.52□□□□□ -1.37
HOXB3-213ENST00000552000 CEP250Q9BV73 2442 aa6.52□□□□□ -1.37
HOXB3-213ENST00000552000 USP34Q70CQ2 3546 aa6.51□□□□□ -1.37
HOXB3-213ENST00000552000 ACACBO00763 2458 aa6.51□□□□□ -1.37
HOXB3-213ENST00000552000 EPOPA6NHQ4 379 aa6.51□□□□□ -1.37
HOXB3-213ENST00000552000 FIGNL2A6NMB9 653 aa6.51□□□□□ -1.37
HOXB3-213ENST00000552000 SMIM22K7EJ46 135 aa6.51□□□□□ -1.37
HOXB3-213ENST00000552000 ADCY6O43306 1168 aa6.51□□□□□ -1.37
HOXB3-213ENST00000552000 DUSP11O75319 330 aaKnown RBP6.51□□□□□ -1.37
HOXB3-213ENST00000552000 SNAI1O95863 264 aaPredicted RBP6.51□□□□□ -1.37
HOXB3-213ENST00000552000 ASGR1P07306 291 aa6.51□□□□□ -1.37
HOXB3-213ENST00000552000 FSHRP23945 695 aa6.51□□□□□ -1.37
HOXB3-213ENST00000552000 CST5P28325 142 aaPredicted RBP6.51□□□□□ -1.37
HOXB3-213ENST00000552000 STAT3P40763 770 aa6.51□□□□□ -1.37
HOXB3-213ENST00000552000 GRM5P41594 1212 aa6.51□□□□□ -1.37
HOXB3-213ENST00000552000 MRE11P49959 708 aa6.51□□□□□ -1.37
HOXB3-213ENST00000552000 GABPAQ06546 454 aa6.51□□□□□ -1.37
HOXB3-213ENST00000552000 MTX1Q13505 466 aa6.51□□□□□ -1.37
HOXB3-213ENST00000552000 ALDH1L2Q3SY69 923 aa6.51□□□□□ -1.37
HOXB3-213ENST00000552000 GNASQ5JWF2 1037 aa6.51□□□□□ -1.37
HOXB3-213ENST00000552000 RNFT1Q5M7Z0 435 aa6.51□□□□□ -1.37
HOXB3-213ENST00000552000 RIOX2Q8IUF8 465 aa6.51□□□□□ -1.37
HOXB3-213ENST00000552000 FAM9BQ8IZU0 186 aa6.51□□□□□ -1.37
HOXB3-213ENST00000552000 CCDC155Q8N6L0 562 aa6.51□□□□□ -1.37
HOXB3-213ENST00000552000 MAGEB6Q8N7X4 407 aa6.51□□□□□ -1.37
HOXB3-213ENST00000552000 WHAMMQ8TF30 809 aa6.51□□□□□ -1.37
HOXB3-213ENST00000552000 UIMC1Q96RL1 719 aa6.51□□□□□ -1.37
HOXB3-213ENST00000552000 API5Q9BZZ5 524 aaKnown RBP6.51□□□□□ -1.37
HOXB3-213ENST00000552000 HIPK3Q9H422 1215 aa6.51□□□□□ -1.37
HOXB3-213ENST00000552000 SPC25Q9HBM1 224 aa6.51□□□□□ -1.37
HOXB3-213ENST00000552000 CD320Q9NPF0 282 aa6.51□□□□□ -1.37
HOXB3-213ENST00000552000 NOB1Q9ULX3 412 aaKnown RBP6.51□□□□□ -1.37
HOXB3-213ENST00000552000 COG5Q9UP83 839 aa6.51□□□□□ -1.37
HOXB3-213ENST00000552000 DIS3Q9Y2L1 958 aaKnown RBP6.51□□□□□ -1.37
HOXB3-213ENST00000552000 PCDHA11Q9Y5I1 949 aa6.51□□□□□ -1.37
HOXB3-213ENST00000552000 CHD8Q9HCK8 2581 aa6.5□□□□□ -1.37
HOXB3-213ENST00000552000 PNMA6EA0A0J9YXQ4 647 aa6.5□□□□□ -1.37
HOXB3-213ENST00000552000 E9PSI1 815 aa6.5□□□□□ -1.37
HOXB3-213ENST00000552000 PI4K2BG5E9Z4 385 aa6.5□□□□□ -1.37
HOXB3-213ENST00000552000 WDR46O15213 610 aaKnown RBP6.5□□□□□ -1.37
HOXB3-213ENST00000552000 ARHGEF15O94989 841 aa6.5□□□□□ -1.37
HOXB3-213ENST00000552000 CD4P01730 458 aa6.5□□□□□ -1.37
HOXB3-213ENST00000552000 CA3P07451 260 aa6.5□□□□□ -1.37
HOXB3-213ENST00000552000 GNAI3P08754 354 aa6.5□□□□□ -1.37
HOXB3-213ENST00000552000 CYP2D6P10635 497 aa6.5□□□□□ -1.37
HOXB3-213ENST00000552000 AKR1B1P15121 316 aa6.5□□□□□ -1.37
HOXB3-213ENST00000552000 ATP2A2P16615 1042 aaKnown RBP6.5□□□□□ -1.37
HOXB3-213ENST00000552000 POU3F3P20264 500 aaPredicted RBP6.5□□□□□ -1.37
HOXB3-213ENST00000552000 GJA9P57773 515 aa6.5□□□□□ -1.37
HOXB3-213ENST00000552000 BEX3Q00994 111 aa6.5□□□□□ -1.37
HOXB3-213ENST00000552000 ICA1Q05084 483 aa6.5□□□□□ -1.37
HOXB3-213ENST00000552000 OS9Q13438 667 aaPredicted RBP6.5□□□□□ -1.37
HOXB3-213ENST00000552000 ACVR2BQ13705 512 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms