RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 FUT2Q10981 343 aa12.24□□□□□ -0.45
PTCH1-225ENST00000551845 STK3Q13188 491 aa12.24□□□□□ -0.45
PTCH1-225ENST00000551845 ARHGEF16Q5VV41 709 aa12.24□□□□□ -0.45
PTCH1-225ENST00000551845 SLC30A10Q6XR72 485 aa12.24□□□□□ -0.45
PTCH1-225ENST00000551845 HEATR3Q7Z4Q2 680 aa12.24□□□□□ -0.45
PTCH1-225ENST00000551845 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.24□□□□□ -0.45
PTCH1-225ENST00000551845 TRPV1Q8NER1 839 aa12.24□□□□□ -0.45
PTCH1-225ENST00000551845 IL27Q8NEV9 243 aa12.24□□□□□ -0.45
PTCH1-225ENST00000551845 FGD4Q96M96 766 aa12.24□□□□□ -0.45
PTCH1-225ENST00000551845 RMDN3Q96TC7 470 aa12.24□□□□□ -0.45
PTCH1-225ENST00000551845 UBE2OQ9C0C9 1292 aaKnown RBP12.24□□□□□ -0.45
PTCH1-225ENST00000551845 PSTPIP2Q9H939 334 aa12.24□□□□□ -0.45
PTCH1-225ENST00000551845 ZHX1Q9UKY1 873 aaPredicted RBP12.24□□□□□ -0.45
PTCH1-225ENST00000551845 RANBP2P49792 3224 aaKnown RBP12.23□□□□□ -0.45
PTCH1-225ENST00000551845 hCG_1984214I3L0E3 225 aa12.23□□□□□ -0.45
PTCH1-225ENST00000551845 AKR1A1P14550 325 aa12.23□□□□□ -0.45
PTCH1-225ENST00000551845 IFNAR1P17181 557 aa12.23□□□□□ -0.45
PTCH1-225ENST00000551845 HOXA13P31271 388 aaPredicted RBP12.23□□□□□ -0.45
PTCH1-225ENST00000551845 MAGEA10P43363 369 aaPredicted RBP12.23□□□□□ -0.45
PTCH1-225ENST00000551845 HSD17B4P51659 736 aa12.23□□□□□ -0.45
PTCH1-225ENST00000551845 GHRHRQ02643 423 aa12.23□□□□□ -0.45
PTCH1-225ENST00000551845 PDE4DQ08499 809 aa12.23□□□□□ -0.45
PTCH1-225ENST00000551845 SSRP1Q08945 709 aaKnown RBP12.23□□□□□ -0.45
PTCH1-225ENST00000551845 NTRK3Q16288 839 aa12.23□□□□□ -0.45
PTCH1-225ENST00000551845 LHX8Q68G74 356 aa12.23□□□□□ -0.45
PTCH1-225ENST00000551845 IQSEC1Q6DN90 963 aa12.23□□□□□ -0.45
PTCH1-225ENST00000551845 FCHSD1Q86WN1 690 aa12.23□□□□□ -0.45
PTCH1-225ENST00000551845 TRIM22Q8IYM9 498 aa12.23□□□□□ -0.45
PTCH1-225ENST00000551845 ZNF713Q8N859 430 aaPredicted RBP12.23□□□□□ -0.45
PTCH1-225ENST00000551845 ANKLE1Q8NAG6 615 aa12.23□□□□□ -0.45
PTCH1-225ENST00000551845 ARRDC4Q8NCT1 418 aa12.23□□□□□ -0.45
PTCH1-225ENST00000551845 SMARCC2Q8TAQ2 1214 aa12.23□□□□□ -0.45
PTCH1-225ENST00000551845 MORC4Q8TE76 937 aa12.23□□□□□ -0.45
PTCH1-225ENST00000551845 IWS1Q96ST2 819 aa12.23□□□□□ -0.45
PTCH1-225ENST00000551845 BACH2Q9BYV9 841 aa12.23□□□□□ -0.45
PTCH1-225ENST00000551845 CRISPLD2Q9H0B8 497 aa12.23□□□□□ -0.45
PTCH1-225ENST00000551845 NCOA5Q9HCD5 579 aaKnown RBP12.23□□□□□ -0.45
PTCH1-225ENST00000551845 OGDHLQ9ULD0 1010 aa12.23□□□□□ -0.45
PTCH1-225ENST00000551845 TPCN1Q9ULQ1 816 aa12.23□□□□□ -0.45
PTCH1-225ENST00000551845 CNTNAP5Q8WYK1 1306 aa12.22□□□□□ -0.45
PTCH1-225ENST00000551845 OPLAHO14841 1288 aa12.22□□□□□ -0.45
PTCH1-225ENST00000551845 PFKFB2O60825 505 aa12.22□□□□□ -0.45
PTCH1-225ENST00000551845 CDKL5O76039 1030 aa12.22□□□□□ -0.45
PTCH1-225ENST00000551845 RARBP10826 455 aa12.22□□□□□ -0.45
PTCH1-225ENST00000551845 NAPAP54920 295 aa12.22□□□□□ -0.45
PTCH1-225ENST00000551845 STXBP2Q15833 593 aa12.22□□□□□ -0.45
PTCH1-225ENST00000551845 PFKFB3Q16875 520 aaPredicted RBP12.22□□□□□ -0.45
PTCH1-225ENST00000551845 EEPD1Q7L9B9 569 aa12.22□□□□□ -0.45
PTCH1-225ENST00000551845 PHKBQ93100 1093 aa12.22□□□□□ -0.45
PTCH1-225ENST00000551845 SLC26A6Q9BXS9 759 aa12.22□□□□□ -0.45
PTCH1-225ENST00000551845 RNF26Q9BY78 433 aaPredicted RBP12.22□□□□□ -0.45
PTCH1-225ENST00000551845 GLT8D2Q9H1C3 349 aa12.22□□□□□ -0.45
PTCH1-225ENST00000551845 VTA1Q9NP79 307 aa12.22□□□□□ -0.45
PTCH1-225ENST00000551845 A0A0G2JMZ2 1700 aa12.22□□□□□ -0.45
PTCH1-225ENST00000551845 SMCO2A6NFE2 343 aa12.21□□□□□ -0.45
PTCH1-225ENST00000551845 PIK3CDO00329 1044 aa12.21□□□□□ -0.45
PTCH1-225ENST00000551845 EIF3JO75822 258 aaKnown RBP12.21□□□□□ -0.45
PTCH1-225ENST00000551845 NR3C2P08235 984 aa12.21□□□□□ -0.45
PTCH1-225ENST00000551845 SCG2P13521 617 aa12.21□□□□□ -0.45
PTCH1-225ENST00000551845 SCRN1Q12765 414 aa12.21□□□□□ -0.45
PTCH1-225ENST00000551845 RABEP1Q15276 862 aa12.21□□□□□ -0.45
PTCH1-225ENST00000551845 CCDC144BQ3MJ40 725 aa12.21□□□□□ -0.45
PTCH1-225ENST00000551845 ANO1Q5XXA6 986 aa12.21□□□□□ -0.45
PTCH1-225ENST00000551845 WWC2Q6AWC2 1192 aa12.21□□□□□ -0.45
PTCH1-225ENST00000551845 USP17L6PQ6QN14 398 aa12.21□□□□□ -0.45
PTCH1-225ENST00000551845 NOL8Q76FK4 1167 aaKnown RBP12.21□□□□□ -0.45
PTCH1-225ENST00000551845 TEX2Q8IWB9 1127 aa12.21□□□□□ -0.45
PTCH1-225ENST00000551845 CCDC12Q8WUD4 166 aaPredicted RBP12.21□□□□□ -0.45
PTCH1-225ENST00000551845 GPKOWQ92917 476 aaPredicted RBP eCLIP12.21□□□□□ -0.45
PTCH1-225ENST00000551845 KIF2CQ99661 725 aa12.21□□□□□ -0.45
PTCH1-225ENST00000551845 C11orf49Q9H6J7 331 aa12.21□□□□□ -0.45
PTCH1-225ENST00000551845 SPC25Q9HBM1 224 aa12.21□□□□□ -0.45
PTCH1-225ENST00000551845 BARHL2Q9NY43 387 aa12.21□□□□□ -0.45
PTCH1-225ENST00000551845 COL20A1Q9P218 1284 aa12.21□□□□□ -0.45
PTCH1-225ENST00000551845 LIMCH1Q9UPQ0 1083 aa12.21□□□□□ -0.45
PTCH1-225ENST00000551845 DOCK3Q8IZD9 2030 aa12.21□□□□□ -0.46
PTCH1-225ENST00000551845 NID2Q14112 1375 aa12.2□□□□□ -0.46
PTCH1-225ENST00000551845 ASTN1O14525 1302 aa12.2□□□□□ -0.46
PTCH1-225ENST00000551845 MEIS2O14770 477 aa12.2□□□□□ -0.46
PTCH1-225ENST00000551845 PPFIA3O75145 1194 aa12.2□□□□□ -0.46
PTCH1-225ENST00000551845 DUSP11O75319 330 aaKnown RBP12.2□□□□□ -0.46
PTCH1-225ENST00000551845 MYCLP12524 364 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-225ENST00000551845 EIF2AK2P19525 551 aaKnown RBP12.2□□□□□ -0.46
PTCH1-225ENST00000551845 EDNRBP24530 442 aa12.2□□□□□ -0.46
PTCH1-225ENST00000551845 TNFAIP2Q03169 654 aa12.2□□□□□ -0.46
PTCH1-225ENST00000551845 PKN1Q16512 942 aa12.2□□□□□ -0.46
PTCH1-225ENST00000551845 ME3Q16798 604 aa12.2□□□□□ -0.46
PTCH1-225ENST00000551845 TAPT1Q6NXT6 567 aa12.2□□□□□ -0.46
PTCH1-225ENST00000551845 PPP1R18Q6NYC8 613 aa12.2□□□□□ -0.46
PTCH1-225ENST00000551845 ZSCAN31Q96LW9 406 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-225ENST00000551845 KATNBL1Q9H079 304 aa12.2□□□□□ -0.46
PTCH1-225ENST00000551845 C6orf50Q9HD87 102 aa12.2□□□□□ -0.46
PTCH1-225ENST00000551845 XPNPEP3Q9NQH7 507 aa12.2□□□□□ -0.46
PTCH1-225ENST00000551845 PXMP2Q9NR77 195 aa12.2□□□□□ -0.46
PTCH1-225ENST00000551845 PDGFCQ9NRA1 345 aa12.2□□□□□ -0.46
PTCH1-225ENST00000551845 SPDYE3A6NKU9 549 aa12.19□□□□□ -0.46
PTCH1-225ENST00000551845 STXBP3O00186 592 aa12.19□□□□□ -0.46
PTCH1-225ENST00000551845 ST18O60284 1047 aa12.19□□□□□ -0.46
PTCH1-225ENST00000551845 DEXIO95424 95 aa12.19□□□□□ -0.46
PTCH1-225ENST00000551845 FOSP01100 380 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms