RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 SNX29Q8TEQ0 813 aa12.94□□□□□ -0.34
RAB5C-208ENST00000551338 TEPSINQ96N21 525 aa12.94□□□□□ -0.34
RAB5C-208ENST00000551338 GLIS2Q9BZE0 524 aaPredicted RBP12.94□□□□□ -0.34
RAB5C-208ENST00000551338 RANBP17Q9H2T7 1088 aaKnown RBP12.94□□□□□ -0.34
RAB5C-208ENST00000551338 KCNMB3Q9NPA1 279 aa12.94□□□□□ -0.34
RAB5C-208ENST00000551338 BCS1LQ9Y276 419 aa12.94□□□□□ -0.34
RAB5C-208ENST00000551338 PAPPA2Q9BXP8 1791 aa12.94□□□□□ -0.34
RAB5C-208ENST00000551338 WDR81Q562E7 1941 aa12.94□□□□□ -0.34
RAB5C-208ENST00000551338 PLA2G6O60733 806 aa12.93□□□□□ -0.34
RAB5C-208ENST00000551338 SFPQP23246 707 aaKnown RBP eCLIP12.93□□□□□ -0.34
RAB5C-208ENST00000551338 SREBF1P36956 1147 aa12.93□□□□□ -0.34
RAB5C-208ENST00000551338 USP11P51784 963 aa12.93□□□□□ -0.34
RAB5C-208ENST00000551338 STAT2P52630 851 aa12.93□□□□□ -0.34
RAB5C-208ENST00000551338 ASIC1P78348 528 aa12.93□□□□□ -0.34
RAB5C-208ENST00000551338 ARHGAP4P98171 946 aa12.93□□□□□ -0.34
RAB5C-208ENST00000551338 RASA3Q14644 834 aa12.93□□□□□ -0.34
RAB5C-208ENST00000551338 NR1I3Q14994 352 aa12.93□□□□□ -0.34
RAB5C-208ENST00000551338 DNTTIP2Q5QJE6 756 aaKnown RBP12.93□□□□□ -0.34
RAB5C-208ENST00000551338 GIMAP8Q8ND71 665 aaPredicted RBP12.93□□□□□ -0.34
RAB5C-208ENST00000551338 GJA10Q969M2 543 aa12.93□□□□□ -0.34
RAB5C-208ENST00000551338 RAB34Q9BZG1 259 aa12.93□□□□□ -0.34
RAB5C-208ENST00000551338 KCND1Q9NSA2 647 aa12.93□□□□□ -0.34
RAB5C-208ENST00000551338 PPP1R1BQ9UD71 204 aaPredicted RBP12.93□□□□□ -0.34
RAB5C-208ENST00000551338 LOC285556D6RIA3 1793 aa12.93□□□□□ -0.34
RAB5C-208ENST00000551338 PTPRFP10586 1907 aa12.93□□□□□ -0.34
RAB5C-208ENST00000551338 OTOFQ9HC10 1997 aa12.92□□□□□ -0.34
RAB5C-208ENST00000551338 ASTN2O75129 1339 aaPredicted RBP12.92□□□□□ -0.34
RAB5C-208ENST00000551338 TRIM49BA6NDI0 452 aa12.92□□□□□ -0.34
RAB5C-208ENST00000551338 USP27XA6NNY8 438 aa12.92□□□□□ -0.34
RAB5C-208ENST00000551338 PHF20L1A8MW92 1017 aa12.92□□□□□ -0.34
RAB5C-208ENST00000551338 FZD9O00144 591 aa12.92□□□□□ -0.34
RAB5C-208ENST00000551338 PBX1P40424 430 aa12.92□□□□□ -0.34
RAB5C-208ENST00000551338 PTGER2P43116 358 aa12.92□□□□□ -0.34
RAB5C-208ENST00000551338 KCNJ6P48051 423 aa12.92□□□□□ -0.34
RAB5C-208ENST00000551338 GMPSP49915 693 aaPredicted RBP12.92□□□□□ -0.34
RAB5C-208ENST00000551338 GOLGA8FQ08AF8 430 aa12.92□□□□□ -0.34
RAB5C-208ENST00000551338 GOLGA8DPQ0D2H9 430 aa12.92□□□□□ -0.34
RAB5C-208ENST00000551338 MCM6Q14566 821 aa12.92□□□□□ -0.34
RAB5C-208ENST00000551338 ZYXQ15942 572 aaKnown RBP12.92□□□□□ -0.34
RAB5C-208ENST00000551338 ECM1Q16610 540 aa12.92□□□□□ -0.34
RAB5C-208ENST00000551338 HYIQ5T013 277 aa12.92□□□□□ -0.34
RAB5C-208ENST00000551338 KCNK18Q7Z418 384 aa12.92□□□□□ -0.34
RAB5C-208ENST00000551338 FAM160B2Q86V87 743 aa12.92□□□□□ -0.34
RAB5C-208ENST00000551338 LARP4BQ92615 738 aaKnown RBP12.92□□□□□ -0.34
RAB5C-208ENST00000551338 RAD54LQ92698 747 aa12.92□□□□□ -0.34
RAB5C-208ENST00000551338 LENG9Q96B70 501 aa12.92□□□□□ -0.34
RAB5C-208ENST00000551338 SH2D4AQ9H788 454 aa12.92□□□□□ -0.34
RAB5C-208ENST00000551338 ADD3Q9UEY8 706 aaKnown RBP12.92□□□□□ -0.34
RAB5C-208ENST00000551338 LIMA1Q9UHB6 759 aaKnown RBP12.92□□□□□ -0.34
RAB5C-208ENST00000551338 SCAF8Q9UPN6 1271 aaKnown RBP12.92□□□□□ -0.34
RAB5C-208ENST00000551338 MAPK8IP1Q9UQF2 711 aa12.92□□□□□ -0.34
RAB5C-208ENST00000551338 MYH11P35749 1972 aa12.92□□□□□ -0.34
RAB5C-208ENST00000551338 ZNF541Q9H0D2 1346 aa12.91□□□□□ -0.34
RAB5C-208ENST00000551338 KDM3AQ9Y4C1 1321 aa12.91□□□□□ -0.34
RAB5C-208ENST00000551338 MYMKA6NI61 221 aa12.91□□□□□ -0.34
RAB5C-208ENST00000551338 PIK3CDO00329 1044 aa12.91□□□□□ -0.34
RAB5C-208ENST00000551338 TEX33O43247 280 aa12.91□□□□□ -0.34
RAB5C-208ENST00000551338 SLC26A4O43511 780 aa12.91□□□□□ -0.34
RAB5C-208ENST00000551338 FOSP01100 380 aaPredicted RBP12.91□□□□□ -0.34
RAB5C-208ENST00000551338 ASNSP08243 561 aa12.91□□□□□ -0.34
RAB5C-208ENST00000551338 CIITAP33076 1130 aa12.91□□□□□ -0.34
RAB5C-208ENST00000551338 PMS1P54277 932 aaKnown RBP12.91□□□□□ -0.34
RAB5C-208ENST00000551338 SPAG1Q07617 926 aa12.91□□□□□ -0.34
RAB5C-208ENST00000551338 PDE4DQ08499 809 aa12.91□□□□□ -0.34
RAB5C-208ENST00000551338 TNFAIP1Q13829 316 aa12.91□□□□□ -0.34
RAB5C-208ENST00000551338 TPD52L1Q16890 204 aaPredicted RBP12.91□□□□□ -0.34
RAB5C-208ENST00000551338 Q4G0T1 1027 aa12.91□□□□□ -0.34
RAB5C-208ENST00000551338 COBLL1Q53SF7 1204 aa12.91□□□□□ -0.34
RAB5C-208ENST00000551338 KRT79Q5XKE5 535 aa12.91□□□□□ -0.34
RAB5C-208ENST00000551338 SV2BQ7L1I2 683 aa12.91□□□□□ -0.34
RAB5C-208ENST00000551338 TMEM139Q8IV31 216 aa12.91□□□□□ -0.34
RAB5C-208ENST00000551338 MICALL2Q8IY33 904 aa12.91□□□□□ -0.34
RAB5C-208ENST00000551338 ETNPPLQ8TBG4 499 aa12.91□□□□□ -0.34
RAB5C-208ENST00000551338 CCDC47Q96A33 483 aaKnown RBP12.91□□□□□ -0.34
RAB5C-208ENST00000551338 CDK5RAP3Q96JB5 506 aa12.91□□□□□ -0.34
RAB5C-208ENST00000551338 TMX1Q9H3N1 280 aa12.91□□□□□ -0.34
RAB5C-208ENST00000551338 EXOC1Q9NV70 894 aa12.91□□□□□ -0.34
RAB5C-208ENST00000551338 SPDYE3A6NKU9 549 aa12.9□□□□□ -0.34
RAB5C-208ENST00000551338 TPM2P07951 284 aa12.9□□□□□ -0.34
RAB5C-208ENST00000551338 HOXA13P31271 388 aaPredicted RBP12.9□□□□□ -0.34
RAB5C-208ENST00000551338 COPB1P53618 953 aaKnown RBP12.9□□□□□ -0.34
RAB5C-208ENST00000551338 AMPD3Q01432 767 aa12.9□□□□□ -0.34
RAB5C-208ENST00000551338 SPIRE1Q08AE8 756 aa12.9□□□□□ -0.34
RAB5C-208ENST00000551338 TRAF1Q13077 416 aa12.9□□□□□ -0.34
RAB5C-208ENST00000551338 KRT31Q15323 416 aa12.9□□□□□ -0.34
RAB5C-208ENST00000551338 E4F1Q66K89 784 aaPredicted RBP12.9□□□□□ -0.34
RAB5C-208ENST00000551338 SPECC1LQ69YQ0 1117 aa12.9□□□□□ -0.34
RAB5C-208ENST00000551338 TTI2Q6NXR4 508 aa12.9□□□□□ -0.34
RAB5C-208ENST00000551338 CNNM4Q6P4Q7 775 aa12.9□□□□□ -0.34
RAB5C-208ENST00000551338 CCDC174Q6PII3 467 aa12.9□□□□□ -0.34
RAB5C-208ENST00000551338 UNC13DQ70J99 1090 aa12.9□□□□□ -0.34
RAB5C-208ENST00000551338 SAMD7Q7Z3H4 446 aa12.9□□□□□ -0.34
RAB5C-208ENST00000551338 TEX2Q8IWB9 1127 aa12.9□□□□□ -0.34
RAB5C-208ENST00000551338 CCAR2Q8N163 923 aaKnown RBP12.9□□□□□ -0.34
RAB5C-208ENST00000551338 KIAA0895Q8NCT3 520 aa12.9□□□□□ -0.34
RAB5C-208ENST00000551338 CCDC112Q8NEF3 446 aa12.9□□□□□ -0.34
RAB5C-208ENST00000551338 NLGN2Q8NFZ4 835 aa12.9□□□□□ -0.34
RAB5C-208ENST00000551338 CHURC1Q8WUH1 139 aa12.9□□□□□ -0.34
RAB5C-208ENST00000551338 DHTKD1Q96HY7 919 aaPredicted RBP12.9□□□□□ -0.34
RAB5C-208ENST00000551338 FBXO28Q9NVF7 368 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms